RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 CNTNAP4Q9C0A0 1308 aa9.05□□□□□ -0.96
CTNNA1-217ENST00000519634 GLTPD2A6NH11 291 aa9.04□□□□□ -0.96
CTNNA1-217ENST00000519634 PHKG2P15735 406 aa9.04□□□□□ -0.96
CTNNA1-217ENST00000519634 TESK2Q96S53 571 aa9.04□□□□□ -0.96
CTNNA1-217ENST00000519634 EMILIN3Q9NT22 766 aa9.04□□□□□ -0.96
CTNNA1-217ENST00000519634 KDRP35968 1356 aa9.03□□□□□ -0.96
CTNNA1-217ENST00000519634 TONSLQ96HA7 1378 aa9.03□□□□□ -0.96
CTNNA1-217ENST00000519634 PCNTO95613 3336 aa9.03□□□□□ -0.96
CTNNA1-217ENST00000519634 ERVV-2B6SEH9 535 aa9.03□□□□□ -0.96
CTNNA1-217ENST00000519634 LMNB1P20700 586 aa9.03□□□□□ -0.96
CTNNA1-217ENST00000519634 SLC4A9Q96Q91 983 aa9.03□□□□□ -0.96
CTNNA1-217ENST00000519634 NCAPD2Q15021 1401 aa9.03□□□□□ -0.96
CTNNA1-217ENST00000519634 CHRNA5P30532 468 aa9.02□□□□□ -0.97
CTNNA1-217ENST00000519634 OXER1Q8TDS5 423 aa9.02□□□□□ -0.97
CTNNA1-217ENST00000519634 PTCD2Q8WV60 388 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-217ENST00000519634 PRDM10Q9NQV6 1147 aa9.02□□□□□ -0.97
CTNNA1-217ENST00000519634 EMILIN1Q9Y6C2 1016 aa9.02□□□□□ -0.97
CTNNA1-217ENST00000519634 UBR3Q6ZT12 1888 aa9.02□□□□□ -0.97
CTNNA1-217ENST00000519634 ST20-MTHFSA0A0A6YYL1 179 aa9.01□□□□□ -0.97
CTNNA1-217ENST00000519634 SNPHO15079 494 aa9.01□□□□□ -0.97
CTNNA1-217ENST00000519634 PPM1GO15355 546 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-217ENST00000519634 KDM6AO15550 1401 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-217ENST00000519634 HSP90AB1P08238 724 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-217ENST00000519634 RASSF7Q02833 373 aa9.01□□□□□ -0.97
CTNNA1-217ENST00000519634 DDR1Q08345 913 aa9.01□□□□□ -0.97
CTNNA1-217ENST00000519634 DOK7Q18PE1 504 aa9.01□□□□□ -0.97
CTNNA1-217ENST00000519634 EYA1Q99502 592 aa9.01□□□□□ -0.97
CTNNA1-217ENST00000519634 USP42Q9H9J4 1324 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-217ENST00000519634 TAF1LQ8IZX4 1826 aa9.01□□□□□ -0.97
CTNNA1-217ENST00000519634 POLRMTO00411 1230 aaKnown RBP9□□□□□ -0.97
CTNNA1-217ENST00000519634 HOXB3P14651 431 aaPredicted RBP9□□□□□ -0.97
CTNNA1-217ENST00000519634 PCDH10Q9P2E7 1040 aa9□□□□□ -0.97
CTNNA1-217ENST00000519634 SRP68Q9UHB9 627 aaKnown RBP9□□□□□ -0.97
CTNNA1-217ENST00000519634 WASHC2AQ641Q2 1341 aa9□□□□□ -0.97
CTNNA1-217ENST00000519634 KIAA1551Q9HCM1 1747 aa9□□□□□ -0.97
CTNNA1-217ENST00000519634 FOXN1O15353 648 aa8.99□□□□□ -0.97
CTNNA1-217ENST00000519634 TBC1D12O60347 775 aa8.99□□□□□ -0.97
CTNNA1-217ENST00000519634 CRKLP46109 303 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-217ENST00000519634 CTCFP49711 727 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-217ENST00000519634 AIDAQ96BJ3 306 aa8.99□□□□□ -0.97
CTNNA1-217ENST00000519634 MKRN1Q9UHC7 482 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-217ENST00000519634 C4AP0C0L4 1744 aa8.99□□□□□ -0.97
CTNNA1-217ENST00000519634 KIF13BQ9NQT8 1826 aa8.98□□□□□ -0.97
CTNNA1-217ENST00000519634 DPYSL4O14531 572 aa8.98□□□□□ -0.97
CTNNA1-217ENST00000519634 RIMBP2O15034 1052 aa8.98□□□□□ -0.97
CTNNA1-217ENST00000519634 ZPR1O75312 459 aa8.98□□□□□ -0.97
CTNNA1-217ENST00000519634 TM4SF1P30408 202 aa8.98□□□□□ -0.97
CTNNA1-217ENST00000519634 CABP4P57796 275 aa8.98□□□□□ -0.97
CTNNA1-217ENST00000519634 MAP3K9P80192 1104 aa8.98□□□□□ -0.97
CTNNA1-217ENST00000519634 NBR1Q14596 966 aa8.98□□□□□ -0.97
CTNNA1-217ENST00000519634 TTLL6Q8N841 843 aa8.98□□□□□ -0.97
CTNNA1-217ENST00000519634 ZSWIM6Q9HCJ5 1215 aa8.98□□□□□ -0.97
CTNNA1-217ENST00000519634 MAP2P11137 1827 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-217ENST00000519634 SPDYE16A6NNV3 312 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-217ENST00000519634 POTECB2RU33 542 aa8.97□□□□□ -0.97
CTNNA1-217ENST00000519634 PTCD1O75127 700 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-217ENST00000519634 CDCA8Q53HL2 280 aa8.97□□□□□ -0.97
CTNNA1-217ENST00000519634 TNRC6CQ9HCJ0 1690 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-217ENST00000519634 CNTNAP1P78357 1384 aa8.97□□□□□ -0.97
CTNNA1-217ENST00000519634 RGPD2P0DJD1 1756 aa8.96□□□□□ -0.97
CTNNA1-217ENST00000519634 N4BP2Q86UW6 1770 aaPredicted RBP8.96□□□□□ -0.97
CTNNA1-217ENST00000519634 NFKBIEO00221 500 aa8.96□□□□□ -0.98
CTNNA1-217ENST00000519634 PDIA6Q15084 440 aa8.96□□□□□ -0.98
CTNNA1-217ENST00000519634 PLEKHO1Q53GL0 409 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-217ENST00000519634 PKD1L3Q7Z443 1732 aa8.96□□□□□ -0.98
CTNNA1-217ENST00000519634 H0YIN7 160 aa8.95□□□□□ -0.98
CTNNA1-217ENST00000519634 EIF4A2Q14240 407 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-217ENST00000519634 NFIXQ14938 502 aa8.95□□□□□ -0.98
CTNNA1-217ENST00000519634 FAM161AQ3B820 660 aa8.95□□□□□ -0.98
CTNNA1-217ENST00000519634 ERFEQ4G0M1 354 aa8.95□□□□□ -0.98
CTNNA1-217ENST00000519634 AMOTQ4VCS5 1084 aa8.95□□□□□ -0.98
CTNNA1-217ENST00000519634 USPL1Q5W0Q7 1092 aa8.95□□□□□ -0.98
CTNNA1-217ENST00000519634 ZNF530Q6P9A1 599 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-217ENST00000519634 INTS5Q6P9B9 1019 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-217ENST00000519634 C2CD5Q86YS7 1000 aa8.95□□□□□ -0.98
CTNNA1-217ENST00000519634 PCDHGA4Q9Y5G9 962 aa8.95□□□□□ -0.98
CTNNA1-217ENST00000519634 MTHFSP49914 203 aa8.94□□□□□ -0.98
CTNNA1-217ENST00000519634 ZNF710Q8N1W2 664 aa8.94□□□□□ -0.98
CTNNA1-217ENST00000519634 ABHD8Q96I13 439 aa8.94□□□□□ -0.98
CTNNA1-217ENST00000519634 CARD14Q9BXL6 1004 aa8.94□□□□□ -0.98
CTNNA1-217ENST00000519634 WBP1LQ9NX94 342 aa8.94□□□□□ -0.98
CTNNA1-217ENST00000519634 POLKQ9UBT6 870 aa8.94□□□□□ -0.98
CTNNA1-217ENST00000519634 PDZRN3Q9UPQ7 1066 aa8.94□□□□□ -0.98
CTNNA1-217ENST00000519634 IQCA1LA6NCM1 817 aa8.93□□□□□ -0.98
CTNNA1-217ENST00000519634 TMEM88BA6NKF7 163 aa8.93□□□□□ -0.98
CTNNA1-217ENST00000519634 SERPINB2P05120 415 aa8.93□□□□□ -0.98
CTNNA1-217ENST00000519634 VEGFBP49765 207 aa8.93□□□□□ -0.98
CTNNA1-217ENST00000519634 LBX1P52954 281 aa8.93□□□□□ -0.98
CTNNA1-217ENST00000519634 C1orf141Q5JVX7 400 aa8.93□□□□□ -0.98
CTNNA1-217ENST00000519634 LDHDQ86WU2 507 aa8.93□□□□□ -0.98
CTNNA1-217ENST00000519634 NFATC2IPQ8NCF5 419 aa8.93□□□□□ -0.98
CTNNA1-217ENST00000519634 NARFQ9UHQ1 456 aa8.93□□□□□ -0.98
CTNNA1-217ENST00000519634 SOS1Q07889 1333 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-217ENST00000519634 PASKQ96RG2 1323 aa8.93□□□□□ -0.98
CTNNA1-217ENST00000519634 ITGB4P16144 1822 aa8.93□□□□□ -0.98
CTNNA1-217ENST00000519634 ARFGEF1Q9Y6D6 1849 aa8.92□□□□□ -0.98
CTNNA1-217ENST00000519634 MLLT1Q03111 559 aaPredicted RBP8.92□□□□□ -0.98
CTNNA1-217ENST00000519634 GPR153Q6NV75 609 aa8.92□□□□□ -0.98
CTNNA1-217ENST00000519634 ZNF831Q5JPB2 1677 aa8.91□□□□□ -0.98
CTNNA1-217ENST00000519634 LTBP3Q9NS15 1303 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms