RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 A0A0G2JS52 829 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 IGFBP4P22692 258 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 LINC01559Q495D7 138 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 ZNF784Q8NCA9 323 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 GIPC2Q8TF65 315 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 ZNF516Q92618 1163 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 FOXJ1Q92949 421 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 VTI1AQ96AJ9 217 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 PRIMPOLQ96LW4 560 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 ASB16Q96NS5 453 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 FCF1Q9Y324 198 aaKnown RBP7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 WASLO00401 505 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 FAM13AO94988 1023 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 MAPK1P28482 360 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 GGCXP38435 758 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 WNT7BP56706 349 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 NPAS4Q8IUM7 802 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 GTF3C2Q8WUA4 911 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 NGLY1Q96IV0 654 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 KCTD15Q96SI1 283 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 QTRT2Q9H974 415 aaKnown RBP7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 XIRP1Q702N8 1843 aaKnown RBP7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 ABCA6Q8N139 1617 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 ITSN2Q9NZM3 1697 aa7.26□□□□□ -1.25
HMGB1P23-201ENST00000518743 ZNF518AQ6AHZ1 1483 aa7.26□□□□□ -1.25
HMGB1P23-201ENST00000518743 UNCXA6NJT0 531 aa7.26□□□□□ -1.25
HMGB1P23-201ENST00000518743 REREQ9P2R6 1566 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 SH3BP2P78314 561 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 C4orf48Q5BLP8 95 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 CC2D2BQ6DHV5 1058 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 VASH1Q7L8A9 365 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 NKX2-3Q8TAU0 364 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 HELQQ8TDG4 1101 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 CITED4Q96RK1 184 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 IGSF5Q9NSI5 407 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 LRRC9Q6ZRR7 1453 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 PLEKHD1A6NEE1 506 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 NDUFB5O43674 189 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 S1PR4O95977 384 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 ZNF211Q13398 564 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 ESCO1Q5FWF5 840 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 ALKBH2Q6NS38 261 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 RGL4Q8IZJ4 473 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 TSEN2Q8NCE0 465 aaKnown RBP7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 CHMP3Q9Y3E7 222 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 ABCC1P33527 1531 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 TCF3P15923 654 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 ERVK-9P63128 1117 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 DEFB132Q7Z7B7 95 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 AFAP1Q8N556 730 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 C8orf37Q96NL8 207 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 ZNF358Q9NW07 568 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 NWD1Q149M9 1564 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 CTTNBP2Q8WZ74 1663 aa7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 NPR3P17342 541 aa7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 FKBP5Q13451 457 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 EAPPQ56P03 285 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 INTS6LQ5JSJ4 861 aaKnown RBP7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 CYP2U1Q7Z449 544 aa7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 MPNDQ8N594 471 aa7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 KIAA1522Q9P206 1035 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 COL16A1Q07092 1604 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 PLCH2O75038 1416 aa7.21□□□□□ -1.25
HMGB1P23-201ENST00000518743 DEPDC5O75140 1603 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 RPIAP49247 311 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 TRIM32Q13049 653 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 THEMISQ8N1K5 641 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 STAG2Q8N3U4 1231 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 ANKLE1Q8NAG6 615 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 MKNK1Q9BUB5 465 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 RBCK1Q9BYM8 510 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 DNMT3AQ9Y6K1 912 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 SHPRHQ149N8 1683 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 FGD6Q6ZV73 1430 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 MED14O60244 1454 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 ERVH48-1M5A8F1 160 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 GNRH1P01148 92 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 GDF10P55107 478 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 RAB15P59190 212 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 ARHGAP4P98171 946 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 FBXO33Q7Z6M2 555 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 ANO2Q9NQ90 1003 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 USP35Q9P2H5 1018 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 SEPT3Q9UH03 358 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 BRPF3Q9ULD4 1205 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 FAM135AQ9P2D6 1515 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 KDM5DQ9BY66 1539 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 IGSF3O75054 1194 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 CD2BP2O95400 341 aaKnown RBP7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 INHAP05111 366 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 PDE3BQ13370 1112 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 NOM1Q5C9Z4 860 aaKnown RBP7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 EFCAB2Q5VUJ9 269 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 C16orf46Q6P387 395 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 NBPF15Q8N660 670 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 ABTB2Q8N961 1025 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 EHBP1Q8NDI1 1231 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 SCG3Q8WXD2 468 aaKnown RBP7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 DMRTB1Q96MA1 342 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms