RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 KCNQ3O43525 872 aa13.42□□□□□ -0.26
BRD9-216ENST00000518251 HOXB7P09629 217 aa13.42□□□□□ -0.26
BRD9-216ENST00000518251 MS4A1P11836 297 aa13.42□□□□□ -0.26
BRD9-216ENST00000518251 CRBNQ96SW2 442 aa13.42□□□□□ -0.26
BRD9-216ENST00000518251 TNRC6CQ9HCJ0 1690 aaKnown RBP13.42□□□□□ -0.26
BRD9-216ENST00000518251 LAMB4A4D0S4 1761 aa13.42□□□□□ -0.26
BRD9-216ENST00000518251 IPO8O15397 1037 aaKnown RBP13.41□□□□□ -0.26
BRD9-216ENST00000518251 TRAPPC3LQ5T215 181 aa13.41□□□□□ -0.26
BRD9-216ENST00000518251 NLGN1Q8N2Q7 840 aa13.41□□□□□ -0.26
BRD9-216ENST00000518251 NFATC2IPQ8NCF5 419 aa13.41□□□□□ -0.26
BRD9-216ENST00000518251 EXOC6Q8TAG9 804 aa13.41□□□□□ -0.26
BRD9-216ENST00000518251 ARHGEF1Q92888 912 aaKnown RBP13.41□□□□□ -0.26
BRD9-216ENST00000518251 CCDC87Q9NVE4 849 aa13.41□□□□□ -0.26
BRD9-216ENST00000518251 PPP4R2Q9NY27 417 aa13.41□□□□□ -0.26
BRD9-216ENST00000518251 NOB1Q9ULX3 412 aaKnown RBP13.41□□□□□ -0.26
BRD9-216ENST00000518251 TCERG1O14776 1098 aaKnown RBP13.4□□□□□ -0.26
BRD9-216ENST00000518251 KCNA3P22001 575 aa13.4□□□□□ -0.26
BRD9-216ENST00000518251 RC3H1Q5TC82 1133 aaKnown RBP13.4□□□□□ -0.26
BRD9-216ENST00000518251 ZNF790Q6PG37 636 aa13.4□□□□□ -0.26
BRD9-216ENST00000518251 TTC5Q8N0Z6 440 aa13.4□□□□□ -0.26
BRD9-216ENST00000518251 HEG1Q9ULI3 1381 aa13.4□□□□□ -0.26
BRD9-216ENST00000518251 USP42Q9H9J4 1324 aaKnown RBP13.39□□□□□ -0.27
BRD9-216ENST00000518251 RPS6KA4O75676 772 aa13.39□□□□□ -0.27
BRD9-216ENST00000518251 DDR1Q08345 913 aa13.39□□□□□ -0.27
BRD9-216ENST00000518251 HDGFL1Q5TGJ6 251 aa13.39□□□□□ -0.27
BRD9-216ENST00000518251 CCDC30Q5VVM6 783 aa13.39□□□□□ -0.27
BRD9-216ENST00000518251 ATF7IPQ6VMQ6 1270 aa13.39□□□□□ -0.27
BRD9-216ENST00000518251 ARHGAP27Q6ZUM4 889 aa13.39□□□□□ -0.27
BRD9-216ENST00000518251 FTSJ3Q8IY81 847 aaKnown RBP13.39□□□□□ -0.27
BRD9-216ENST00000518251 RBM46Q8TBY0 533 aaKnown RBP13.39□□□□□ -0.27
BRD9-216ENST00000518251 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
BRD9-216ENST00000518251 STK31Q9BXU1 1019 aa13.39□□□□□ -0.27
BRD9-216ENST00000518251 CHMP4AQ9BY43 222 aa13.39□□□□□ -0.27
BRD9-216ENST00000518251 TNNQ9UQP3 1299 aa13.39□□□□□ -0.27
BRD9-216ENST00000518251 TRIM27P14373 513 aa13.38□□□□□ -0.27
BRD9-216ENST00000518251 SLC39A6Q13433 755 aa13.38□□□□□ -0.27
BRD9-216ENST00000518251 C9orf131Q5VYM1 1079 aa13.38□□□□□ -0.27
BRD9-216ENST00000518251 DZIP1LQ8IYY4 767 aaKnown RBP13.38□□□□□ -0.27
BRD9-216ENST00000518251 PANK1Q8TE04 598 aa13.38□□□□□ -0.27
BRD9-216ENST00000518251 ARHGAP45Q92619 1136 aa13.38□□□□□ -0.27
BRD9-216ENST00000518251 PARP3Q9Y6F1 533 aa13.38□□□□□ -0.27
BRD9-216ENST00000518251 CACNA1FO60840 1977 aa13.38□□□□□ -0.27
BRD9-216ENST00000518251 RFC4P35249 363 aa13.37□□□□□ -0.27
BRD9-216ENST00000518251 HTRA3P83110 453 aa13.37□□□□□ -0.27
BRD9-216ENST00000518251 CLUAP1Q96AJ1 413 aa13.37□□□□□ -0.27
BRD9-216ENST00000518251 API5Q9BZZ5 524 aaKnown RBP13.37□□□□□ -0.27
BRD9-216ENST00000518251 SRP68Q9UHB9 627 aaKnown RBP13.37□□□□□ -0.27
BRD9-216ENST00000518251 PTPRCP08575 1304 aa13.37□□□□□ -0.27
BRD9-216ENST00000518251 MYH14Q7Z406 1995 aaKnown RBP13.36□□□□□ -0.27
BRD9-216ENST00000518251 RLBP1P12271 317 aa13.36□□□□□ -0.27
BRD9-216ENST00000518251 CRKLP46109 303 aaKnown RBP13.36□□□□□ -0.27
BRD9-216ENST00000518251 JMYQ8N9B5 988 aa13.36□□□□□ -0.27
BRD9-216ENST00000518251 FMNL2Q96PY5 1086 aa13.36□□□□□ -0.27
BRD9-216ENST00000518251 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
BRD9-216ENST00000518251 ABCC4O15439 1325 aa13.36□□□□□ -0.27
BRD9-216ENST00000518251 TIAM2Q8IVF5 1701 aa13.36□□□□□ -0.27
BRD9-216ENST00000518251 NRXN2Q9P2S2 1712 aa13.36□□□□□ -0.27
BRD9-216ENST00000518251 DLEC1Q9Y238 1755 aa13.35□□□□□ -0.27
BRD9-216ENST00000518251 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
BRD9-216ENST00000518251 EIF2S2P20042 333 aaKnown RBP13.35□□□□□ -0.27
BRD9-216ENST00000518251 MVPQ14764 893 aaKnown RBP13.35□□□□□ -0.27
BRD9-216ENST00000518251 NECTIN2Q92692 538 aa13.35□□□□□ -0.27
BRD9-216ENST00000518251 KLRG1Q96E93 195 aa13.35□□□□□ -0.27
BRD9-216ENST00000518251 ZNF496Q96IT1 587 aaPredicted RBP13.35□□□□□ -0.27
BRD9-216ENST00000518251 POLRMTO00411 1230 aaKnown RBP13.34□□□□□ -0.27
BRD9-216ENST00000518251 PTCD1O75127 700 aaKnown RBP13.34□□□□□ -0.27
BRD9-216ENST00000518251 FSTL1Q12841 308 aa13.34□□□□□ -0.27
BRD9-216ENST00000518251 RNF181Q9P0P0 153 aa13.34□□□□□ -0.27
BRD9-216ENST00000518251 PIM2Q9P1W9 311 aa13.34□□□□□ -0.27
BRD9-216ENST00000518251 SNRPA1P09661 255 aaKnown RBP13.33□□□□□ -0.28
BRD9-216ENST00000518251 CHRNA5P30532 468 aa13.33□□□□□ -0.28
BRD9-216ENST00000518251 DALRD3Q5D0E6 543 aaKnown RBP13.33□□□□□ -0.28
BRD9-216ENST00000518251 B4GALNT3Q6L9W6 998 aa13.33□□□□□ -0.28
BRD9-216ENST00000518251 TMEM57Q8N5G2 664 aa13.33□□□□□ -0.28
BRD9-216ENST00000518251 CCDC136Q96JN2 1154 aa13.33□□□□□ -0.28
BRD9-216ENST00000518251 KDM2BQ8NHM5 1336 aa13.33□□□□□ -0.28
BRD9-216ENST00000518251 PRAMEF22A3QJZ6 481 aa13.32□□□□□ -0.28
BRD9-216ENST00000518251 RASSF7Q02833 373 aa13.32□□□□□ -0.28
BRD9-216ENST00000518251 FLIIQ13045 1269 aa13.32□□□□□ -0.28
BRD9-216ENST00000518251 AAMPQ13685 434 aa13.32□□□□□ -0.28
BRD9-216ENST00000518251 COL13A1Q5TAT6 717 aaPredicted RBP13.32□□□□□ -0.28
BRD9-216ENST00000518251 G2E3Q7L622 706 aa13.32□□□□□ -0.28
BRD9-216ENST00000518251 ITPRIPQ8IWB1 547 aa13.32□□□□□ -0.28
BRD9-216ENST00000518251 C16orf71Q8IYS4 520 aaPredicted RBP13.32□□□□□ -0.28
BRD9-216ENST00000518251 CHPF2Q9P2E5 772 aa13.32□□□□□ -0.28
BRD9-216ENST00000518251 DBF4Q9UBU7 674 aaPredicted RBP13.32□□□□□ -0.28
BRD9-216ENST00000518251 DDX19BQ9UMR2 479 aa13.32□□□□□ -0.28
BRD9-216ENST00000518251 SCN7AQ01118 1682 aa13.31□□□□□ -0.28
BRD9-216ENST00000518251 INTS5Q6P9B9 1019 aaKnown RBP13.31□□□□□ -0.28
BRD9-216ENST00000518251 ZC3H4Q9UPT8 1303 aaKnown RBP13.31□□□□□ -0.28
BRD9-216ENST00000518251 COL15A1P39059 1388 aa13.31□□□□□ -0.28
BRD9-216ENST00000518251 CARMIL3Q8ND23 1372 aa13.31□□□□□ -0.28
BRD9-216ENST00000518251 FKBP5Q13451 457 aaPredicted RBP13.3□□□□□ -0.28
BRD9-216ENST00000518251 ERBB4Q15303 1308 aa13.3□□□□□ -0.28
BRD9-216ENST00000518251 TM4SF1P30408 202 aa13.29□□□□□ -0.28
BRD9-216ENST00000518251 PRELPP51888 382 aa13.29□□□□□ -0.28
BRD9-216ENST00000518251 USPL1Q5W0Q7 1092 aa13.29□□□□□ -0.28
BRD9-216ENST00000518251 SMC1BQ8NDV3 1235 aa13.29□□□□□ -0.28
BRD9-216ENST00000518251 CHMP4BQ9H444 224 aaKnown RBP13.29□□□□□ -0.28
BRD9-216ENST00000518251 DDX21Q9NR30 783 aaKnown RBP eCLIP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms