RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 TESK2Q96S53 571 aa3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ALG2Q9H553 416 aa3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 TFIP11Q9UBB9 837 aaKnown RBP3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ZC3H4Q9UPT8 1303 aaKnown RBP3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 MSH6P52701 1360 aa3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ATAD2Q6PL18 1390 aa3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 PLEKHH1Q9ULM0 1364 aa3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ATP7BP35670 1465 aa3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 NALCNQ8IZF0 1738 aa3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.07□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ITGBL1O95965 494 aaPredicted RBP3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 SKIP12755 728 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 RAB15P59190 212 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 MCCD1P59942 119 aaPredicted RBP3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 MST1RQ04912 1400 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 TMEM132EQ6IEE7 984 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 EVC2Q86UK5 1308 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 TOPAZ1Q8N9V7 1692 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ANKLE1Q8NAG6 615 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ZNF511Q8NB15 262 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ADAM32Q8TC27 787 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 QRICH2Q9H0J4 1663 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 C19orf44Q9H6X5 657 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 FMN2Q9NZ56 1722 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 CEP126Q9P2H0 1117 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 TRAK1Q9UPV9 953 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 GPSM3Q9Y4H4 160 aa3.06□□□□□ -1.92
SCARNA16.3-201ENST00000516595 XIRP1Q702N8 1843 aaKnown RBP3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 KIF1AQ12756 1690 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 AHDC1Q5TGY3 1603 aaPredicted RBP3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 C1orf167Q5SNV9 1468 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 POLR3AO14802 1390 aaPredicted RBP3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 BRD4O60885 1362 aaPredicted RBP3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ST20-MTHFSA0A0A6YYL1 179 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 PALM3A6NDB9 673 aaPredicted RBP3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 WASLO00401 505 aaPredicted RBP3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 HSPA5P11021 654 aaKnown RBP3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 SLC19A1P41440 591 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 SH3BP2P78314 561 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 TMF1P82094 1093 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 TRIM32Q13049 653 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 WAPLQ7Z5K2 1190 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 EHBP1Q8NDI1 1231 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 SLC10A4Q96EP9 437 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 PPP1R12CQ9BZL4 782 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 PLA2G2EQ9NZK7 142 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 POGKQ9P215 609 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 STK26Q9P289 416 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ITSN1Q15811 1721 aa3.05□□□□□ -1.92
SCARNA16.3-201ENST00000516595 USP32Q8NFA0 1604 aa3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 CPSF1Q10570 1443 aaKnown RBP3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ANKRD36BQ8N2N9 1353 aa3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 DISP3Q9P2K9 1392 aa3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 GIGYF1O75420 1035 aaPredicted RBP3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 PDIA4P13667 645 aaKnown RBP3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ATF3P18847 181 aa3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 VARSP26640 1264 aaKnown RBP3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 FOXC1Q12948 553 aa3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 RC3H1Q5TC82 1133 aaKnown RBP3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 RNF20Q5VTR2 975 aa3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 TBC1D9Q6ZT07 1266 aa3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 VASH1Q7L8A9 365 aaPredicted RBP3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 RNF135Q8IUD6 432 aa3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 FAM174AQ8TBP5 190 aa3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ADAMTS19Q8TE59 1207 aa3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 VRTNQ9H8Y1 702 aa3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 RBM19Q9Y4C8 960 aaKnown RBP3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 MYOM1P52179 1685 aa3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 NHSL1Q5SYE7 1610 aa3.04□□□□□ -1.92
SCARNA16.3-201ENST00000516595 CD163L1Q9NR16 1453 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 EDC4Q6P2E9 1401 aaKnown RBP3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 SSH2Q76I76 1423 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 CCDC7Q96M83 1385 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 KIF7Q2M1P5 1343 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 NPHP3Q7Z494 1330 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 PRR36Q9H6K5 1346 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 PIK3CDO00329 1044 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ATP9BO43861 1147 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 TOM1O60784 492 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 GPR37L1O60883 481 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 RPIAP49247 311 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 WNT7BP56706 349 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 NBPF20Q3BBV1 942 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 ERFEQ4G0M1 354 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 OXLD1Q5BKU9 147 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 PLA2G2CQ5R387 149 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 LIAT1Q6ZQX7 453 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 SH3BP5LQ7L8J4 393 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 DEPDC4Q8N2C3 294 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 KCTD15Q96SI1 283 aaPredicted RBP3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 CDK19Q9BWU1 502 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 USP54Q70EL1 1684 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 MED1Q15648 1581 aaPredicted RBP3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 NRKQ7Z2Y5 1582 aa3.03□□□□□ -1.92
SCARNA16.3-201ENST00000516595 PXDNQ92626 1479 aa3.03□□□□□ -1.93
SCARNA16.3-201ENST00000516595 USP6P35125 1406 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 PPIP5K1Q6PFW1 1433 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 A0A1W2PP64 1363 aa3.02□□□□□ -1.93
SCARNA16.3-201ENST00000516595 SBNO1A3KN83 1393 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms