RNA–Protein interactions for RNA: ENST00000516209.1

RNU2-30P-201, Transcript of RNA, U2 small nuclear 30, pseudogene, humanhuman

BASIC

Gene RNU2-30P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-30P-201ENST00000516209 TXLNAP40222 546 aa8.42□□□□□ -1.06
RNU2-30P-201ENST00000516209 HIRAP54198 1017 aaPredicted RBP8.42□□□□□ -1.06
RNU2-30P-201ENST00000516209 TNP2Q05952 138 aa8.42□□□□□ -1.06
RNU2-30P-201ENST00000516209 NEDD1Q8NHV4 660 aa8.42□□□□□ -1.06
RNU2-30P-201ENST00000516209 SERTM1A2A2V5 107 aa8.41□□□□□ -1.06
RNU2-30P-201ENST00000516209 MAPTP10636 758 aaKnown RBP8.41□□□□□ -1.06
RNU2-30P-201ENST00000516209 PSMA6P60900 246 aaKnown RBP8.41□□□□□ -1.06
RNU2-30P-201ENST00000516209 SLCO4C1Q6ZQN7 724 aa8.41□□□□□ -1.06
RNU2-30P-201ENST00000516209 C1orf229Q6ZS94 237 aaPredicted RBP8.41□□□□□ -1.06
RNU2-30P-201ENST00000516209 C7orf43Q8WVR3 580 aa8.41□□□□□ -1.06
RNU2-30P-201ENST00000516209 CALR3Q96L12 384 aaKnown RBP8.41□□□□□ -1.06
RNU2-30P-201ENST00000516209 PPP1R12CQ9BZL4 782 aa8.41□□□□□ -1.06
RNU2-30P-201ENST00000516209 HCN2Q9UL51 889 aa8.41□□□□□ -1.06
RNU2-30P-201ENST00000516209 PHF20L1A8MW92 1017 aa8.4□□□□□ -1.06
RNU2-30P-201ENST00000516209 ARAFP10398 606 aa8.4□□□□□ -1.06
RNU2-30P-201ENST00000516209 TBCELQ5QJ74 424 aa8.4□□□□□ -1.06
RNU2-30P-201ENST00000516209 BICDL1Q6ZP65 573 aa8.4□□□□□ -1.06
RNU2-30P-201ENST00000516209 BEND7Q8N7W2 519 aaPredicted RBP8.4□□□□□ -1.06
RNU2-30P-201ENST00000516209 TSPAN10Q9H1Z9 355 aaPredicted RBP8.4□□□□□ -1.06
RNU2-30P-201ENST00000516209 CUX1P39880 1505 aa8.39□□□□□ -1.07
RNU2-30P-201ENST00000516209 SHISA8B8ZZ34 492 aa8.39□□□□□ -1.07
RNU2-30P-201ENST00000516209 EFSO43281 561 aa8.39□□□□□ -1.07
RNU2-30P-201ENST00000516209 RASA1P20936 1047 aa8.39□□□□□ -1.07
RNU2-30P-201ENST00000516209 LAMC2Q13753 1193 aa8.39□□□□□ -1.07
RNU2-30P-201ENST00000516209 C1orf53Q5VUE5 145 aa8.39□□□□□ -1.07
RNU2-30P-201ENST00000516209 GALNT6Q8NCL4 622 aa8.39□□□□□ -1.07
RNU2-30P-201ENST00000516209 EDARADDQ8WWZ3 215 aa8.39□□□□□ -1.07
RNU2-30P-201ENST00000516209 ZNF594Q96JF6 807 aaPredicted RBP8.39□□□□□ -1.07
RNU2-30P-201ENST00000516209 AVENQ9NQS1 362 aaPredicted RBP8.39□□□□□ -1.07
RNU2-30P-201ENST00000516209 GJA3Q9Y6H8 435 aa8.39□□□□□ -1.07
RNU2-30P-201ENST00000516209 DNMT3AQ9Y6K1 912 aaPredicted RBP8.39□□□□□ -1.07
RNU2-30P-201ENST00000516209 ABCC8Q09428 1581 aa8.39□□□□□ -1.07
RNU2-30P-201ENST00000516209 CNTNAP5Q8WYK1 1306 aa8.38□□□□□ -1.07
RNU2-30P-201ENST00000516209 DCDC2BA2VCK2 349 aa8.38□□□□□ -1.07
RNU2-30P-201ENST00000516209 KANK4Q5T7N3 995 aaPredicted RBP8.38□□□□□ -1.07
RNU2-30P-201ENST00000516209 PODNQ7Z5L7 613 aa8.38□□□□□ -1.07
RNU2-30P-201ENST00000516209 KCTD17Q8N5Z5 321 aa8.38□□□□□ -1.07
RNU2-30P-201ENST00000516209 TSEN2Q8NCE0 465 aaKnown RBP8.38□□□□□ -1.07
RNU2-30P-201ENST00000516209 GGA1Q9UJY5 639 aa8.38□□□□□ -1.07
RNU2-30P-201ENST00000516209 ZNF232Q9UNY5 417 aa8.38□□□□□ -1.07
RNU2-30P-201ENST00000516209 RBM19Q9Y4C8 960 aaKnown RBP8.38□□□□□ -1.07
RNU2-30P-201ENST00000516209 SFI1A8K8P3 1242 aa8.37□□□□□ -1.07
RNU2-30P-201ENST00000516209 KHNYNO15037 678 aaKnown RBP8.37□□□□□ -1.07
RNU2-30P-201ENST00000516209 SEC13P55735 322 aa8.37□□□□□ -1.07
RNU2-30P-201ENST00000516209 SH3PXD2AQ5TCZ1 1133 aa8.37□□□□□ -1.07
RNU2-30P-201ENST00000516209 STAG2Q8N3U4 1231 aa8.37□□□□□ -1.07
RNU2-30P-201ENST00000516209 CHMP3Q9Y3E7 222 aa8.37□□□□□ -1.07
RNU2-30P-201ENST00000516209 EIF4G3O43432 1585 aaKnown RBP8.36□□□□□ -1.07
RNU2-30P-201ENST00000516209 C21orf2O43822 256 aa8.36□□□□□ -1.07
RNU2-30P-201ENST00000516209 EPXP11678 715 aa8.36□□□□□ -1.07
RNU2-30P-201ENST00000516209 CD33P20138 364 aa8.36□□□□□ -1.07
RNU2-30P-201ENST00000516209 PTK7Q13308 1070 aa8.36□□□□□ -1.07
RNU2-30P-201ENST00000516209 LARP1Q6PKG0 1096 aaKnown RBP8.36□□□□□ -1.07
RNU2-30P-201ENST00000516209 GAS2L2Q8NHY3 880 aa8.36□□□□□ -1.07
RNU2-30P-201ENST00000516209 SYNJ1O43426 1573 aa8.35□□□□□ -1.07
RNU2-30P-201ENST00000516209 POLA1P09884 1462 aaPredicted RBP8.35□□□□□ -1.07
RNU2-30P-201ENST00000516209 FGD5Q6ZNL6 1462 aa8.35□□□□□ -1.07
RNU2-30P-201ENST00000516209 FAM196BA6NMK8 535 aa8.35□□□□□ -1.07
RNU2-30P-201ENST00000516209 MARK1Q9P0L2 795 aa8.35□□□□□ -1.07
RNU2-30P-201ENST00000516209 WDR97A6NE52 1622 aa8.35□□□□□ -1.07
RNU2-30P-201ENST00000516209 TARBP1Q13395 1621 aaKnown RBP8.35□□□□□ -1.07
RNU2-30P-201ENST00000516209 BIVM-ERCC5R4GMW8 1640 aa8.35□□□□□ -1.07
RNU2-30P-201ENST00000516209 HOXB4P17483 251 aaPredicted RBP8.34□□□□□ -1.07
RNU2-30P-201ENST00000516209 ADH6P28332 368 aa8.34□□□□□ -1.07
RNU2-30P-201ENST00000516209 SNRPNP63162 240 aaKnown RBP8.34□□□□□ -1.07
RNU2-30P-201ENST00000516209 CRTC2Q53ET0 693 aaPredicted RBP8.34□□□□□ -1.07
RNU2-30P-201ENST00000516209 ZNF468Q5VIY5 522 aaPredicted RBP8.34□□□□□ -1.07
RNU2-30P-201ENST00000516209 LRRC69Q6ZNQ3 347 aa8.34□□□□□ -1.07
RNU2-30P-201ENST00000516209 RHPN1Q8TCX5 695 aa8.34□□□□□ -1.07
RNU2-30P-201ENST00000516209 STRN4Q9NRL3 753 aa8.34□□□□□ -1.07
RNU2-30P-201ENST00000516209 KLF15Q9UIH9 416 aa8.34□□□□□ -1.07
RNU2-30P-201ENST00000516209 ZNF608Q9ULD9 1512 aaPredicted RBP8.34□□□□□ -1.08
RNU2-30P-201ENST00000516209 IFT140Q96RY7 1462 aa8.33□□□□□ -1.08
RNU2-30P-201ENST00000516209 NEURL1BA8MQ27 555 aa8.33□□□□□ -1.08
RNU2-30P-201ENST00000516209 PPP1R12BO60237 982 aaPredicted RBP8.33□□□□□ -1.08
RNU2-30P-201ENST00000516209 C2orf49Q9BVC5 232 aaPredicted RBP8.33□□□□□ -1.08
RNU2-30P-201ENST00000516209 PHACTR1Q9C0D0 580 aa8.33□□□□□ -1.08
RNU2-30P-201ENST00000516209 VRTNQ9H8Y1 702 aa8.33□□□□□ -1.08
RNU2-30P-201ENST00000516209 NEUROD4Q9HD90 331 aa8.33□□□□□ -1.08
RNU2-30P-201ENST00000516209 MKL2Q9ULH7 1088 aa8.33□□□□□ -1.08
RNU2-30P-201ENST00000516209 ATAD2Q6PL18 1390 aa8.33□□□□□ -1.08
RNU2-30P-201ENST00000516209 RAD54L2Q9Y4B4 1467 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 USP17L15C9J2P7 530 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 USP17L10C9JJH3 530 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 USP17L13C9JLJ4 530 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 USP17L12C9JPN9 530 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 USP17L11C9JVI0 530 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 USP17L21D6R901 530 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 USP17L18D6R9N7 530 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 USP17L22D6RA61 530 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 USP17L17D6RBQ6 530 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 USP17L19D6RCP7 530 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 USP17L20D6RJB6 530 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 LMOD1P29536 600 aaPredicted RBP8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 USP17L24Q0WX57 530 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 CFAP70Q5T0N1 1121 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 DCAF5Q96JK2 942 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 BTBD6Q96KE9 485 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 ANKIB1Q9P2G1 1089 aa8.32□□□□□ -1.08
RNU2-30P-201ENST00000516209 HCN4Q9Y3Q4 1203 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms