RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 NECTIN2Q92692 538 aa16.19■□□□□ 0.18
PTCD2-210ENST00000515198 CARMIL3Q8ND23 1372 aa16.18■□□□□ 0.18
PTCD2-210ENST00000515198 PDIA6Q15084 440 aa16.18■□□□□ 0.18
PTCD2-210ENST00000515198 HDGFL1Q5TGJ6 251 aa16.18■□□□□ 0.18
PTCD2-210ENST00000515198 WDR63Q8IWG1 891 aa16.18■□□□□ 0.18
PTCD2-210ENST00000515198 SETDB2Q96T68 719 aa16.18■□□□□ 0.18
PTCD2-210ENST00000515198 N4BP2Q86UW6 1770 aaPredicted RBP16.18■□□□□ 0.18
PTCD2-210ENST00000515198 KIAA1551Q9HCM1 1747 aa16.17■□□□□ 0.18
PTCD2-210ENST00000515198 ERVV-1B6SEH8 477 aa16.17■□□□□ 0.18
PTCD2-210ENST00000515198 DDX21Q9NR30 783 aaKnown RBP eCLIP16.17■□□□□ 0.18
PTCD2-210ENST00000515198 NUP98P52948 1817 aa16.17■□□□□ 0.18
PTCD2-210ENST00000515198 MAP3K15Q6ZN16 1313 aa16.17■□□□□ 0.18
PTCD2-210ENST00000515198 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
PTCD2-210ENST00000515198 NPHP1O15259 732 aa16.16■□□□□ 0.18
PTCD2-210ENST00000515198 CACNB1Q02641 598 aaPredicted RBP16.16■□□□□ 0.18
PTCD2-210ENST00000515198 CHMP4AQ9BY43 222 aa16.16■□□□□ 0.18
PTCD2-210ENST00000515198 TTLL7Q6ZT98 887 aa16.15■□□□□ 0.18
PTCD2-210ENST00000515198 TSR2Q969E8 191 aaKnown RBP16.15■□□□□ 0.18
PTCD2-210ENST00000515198 DBF4Q9UBU7 674 aaPredicted RBP16.15■□□□□ 0.18
PTCD2-210ENST00000515198 NIP7Q9Y221 180 aaKnown RBP eCLIP16.15■□□□□ 0.18
PTCD2-210ENST00000515198 A0A0G2JLW4 131 aa16.14■□□□□ 0.17
PTCD2-210ENST00000515198 ELL2O00472 640 aaPredicted RBP16.14■□□□□ 0.17
PTCD2-210ENST00000515198 ANXA1P04083 346 aa16.14■□□□□ 0.17
PTCD2-210ENST00000515198 DPEP1P16444 411 aa16.14■□□□□ 0.17
PTCD2-210ENST00000515198 HLFQ16534 295 aa16.14■□□□□ 0.17
PTCD2-210ENST00000515198 PROSER3Q2NL68 480 aa16.14■□□□□ 0.17
PTCD2-210ENST00000515198 LRP10Q7Z4F1 713 aa16.14■□□□□ 0.17
PTCD2-210ENST00000515198 CNBD1Q8NA66 436 aa16.14■□□□□ 0.17
PTCD2-210ENST00000515198 C8orf58Q8NAV2 365 aa16.14■□□□□ 0.17
PTCD2-210ENST00000515198 ZBTB3Q9H5J0 574 aa16.14■□□□□ 0.17
PTCD2-210ENST00000515198 CHPF2Q9P2E5 772 aa16.14■□□□□ 0.17
PTCD2-210ENST00000515198 GRIN3BO60391 1043 aa16.13■□□□□ 0.17
PTCD2-210ENST00000515198 YBX3P16989 372 aaKnown RBP eCLIP16.13■□□□□ 0.17
PTCD2-210ENST00000515198 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
PTCD2-210ENST00000515198 GIGYF2Q6Y7W6 1299 aaKnown RBP16.13■□□□□ 0.17
PTCD2-210ENST00000515198 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
PTCD2-210ENST00000515198 XAGE3Q8WTP9 111 aa16.13■□□□□ 0.17
PTCD2-210ENST00000515198 BRCA1P38398 1863 aaKnown RBP16.12■□□□□ 0.17
PTCD2-210ENST00000515198 ST5P78524 1137 aa16.12■□□□□ 0.17
PTCD2-210ENST00000515198 PRR5LQ6MZQ0 368 aa16.12■□□□□ 0.17
PTCD2-210ENST00000515198 COPS6Q7L5N1 327 aa16.12■□□□□ 0.17
PTCD2-210ENST00000515198 MIER1Q8N108 512 aa16.12■□□□□ 0.17
PTCD2-210ENST00000515198 MYH16Q9H6N6 1097 aa16.12■□□□□ 0.17
PTCD2-210ENST00000515198 HYPKQ9NX55 129 aa16.12■□□□□ 0.17
PTCD2-210ENST00000515198 WWC3Q9ULE0 1092 aa16.12■□□□□ 0.17
PTCD2-210ENST00000515198 CHD4Q14839 1912 aa16.11■□□□□ 0.17
PTCD2-210ENST00000515198 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
PTCD2-210ENST00000515198 CCDC30Q5VVM6 783 aa16.11■□□□□ 0.17
PTCD2-210ENST00000515198 TPTE2Q6XPS3 522 aa16.11■□□□□ 0.17
PTCD2-210ENST00000515198 PIM2Q9P1W9 311 aa16.11■□□□□ 0.17
PTCD2-210ENST00000515198 PDZRN3Q9UPQ7 1066 aa16.11■□□□□ 0.17
PTCD2-210ENST00000515198 ANKRD31Q8N7Z5 1873 aa16.11■□□□□ 0.17
PTCD2-210ENST00000515198 FANCIQ9NVI1 1328 aa16.11■□□□□ 0.17
PTCD2-210ENST00000515198 ANKRD36CQ5JPF3 1778 aa16.1■□□□□ 0.17
PTCD2-210ENST00000515198 DLEC1Q9Y238 1755 aa16.1■□□□□ 0.17
PTCD2-210ENST00000515198 CHRNA5P30532 468 aa16.1■□□□□ 0.17
PTCD2-210ENST00000515198 PDE6BP35913 854 aa16.1■□□□□ 0.17
PTCD2-210ENST00000515198 GOLGA2Q08379 1002 aa16.1■□□□□ 0.17
PTCD2-210ENST00000515198 TWISTNBQ3B726 338 aaPredicted RBP16.1■□□□□ 0.17
PTCD2-210ENST00000515198 TSPYL6Q8N831 410 aa16.1■□□□□ 0.17
PTCD2-210ENST00000515198 BRIP1Q9BX63 1249 aa16.1■□□□□ 0.17
PTCD2-210ENST00000515198 BCS1LQ9Y276 419 aa16.1■□□□□ 0.17
PTCD2-210ENST00000515198 FAM177BA6PVY3 158 aa16.09■□□□□ 0.17
PTCD2-210ENST00000515198 H0YIN7 160 aa16.09■□□□□ 0.17
PTCD2-210ENST00000515198 KCNA3P22001 575 aa16.09■□□□□ 0.17
PTCD2-210ENST00000515198 GTF2E1P29083 439 aaPredicted RBP16.09■□□□□ 0.17
PTCD2-210ENST00000515198 HSP90AB3PQ58FF7 597 aa16.09■□□□□ 0.17
PTCD2-210ENST00000515198 C2CD5Q86YS7 1000 aa16.09■□□□□ 0.17
PTCD2-210ENST00000515198 NYXQ9GZU5 481 aa16.09■□□□□ 0.17
PTCD2-210ENST00000515198 ARFGEF1Q9Y6D6 1849 aa16.08■□□□□ 0.17
PTCD2-210ENST00000515198 GPTP24298 496 aa16.08■□□□□ 0.16
PTCD2-210ENST00000515198 PARP10Q53GL7 1025 aa16.08■□□□□ 0.16
PTCD2-210ENST00000515198 ZNF34Q8IZ26 560 aa16.08■□□□□ 0.16
PTCD2-210ENST00000515198 CCDC24Q8N4L8 307 aa16.08■□□□□ 0.16
PTCD2-210ENST00000515198 PLBD2Q8NHP8 589 aa16.08■□□□□ 0.16
PTCD2-210ENST00000515198 STK31Q9BXU1 1019 aa16.08■□□□□ 0.16
PTCD2-210ENST00000515198 YY1P25490 414 aa16.07■□□□□ 0.16
PTCD2-210ENST00000515198 DALRD3Q5D0E6 543 aaKnown RBP16.07■□□□□ 0.16
PTCD2-210ENST00000515198 ANKRD13DQ6ZTN6 518 aa16.07■□□□□ 0.16
PTCD2-210ENST00000515198 PPP1R42Q7Z4L9 355 aa16.07■□□□□ 0.16
PTCD2-210ENST00000515198 ZNF521Q96K83 1311 aa16.07■□□□□ 0.16
PTCD2-210ENST00000515198 IBTKQ9P2D0 1353 aaPredicted RBP16.07■□□□□ 0.16
PTCD2-210ENST00000515198 UBN2Q6ZU65 1347 aa16.06■□□□□ 0.16
PTCD2-210ENST00000515198 EXOSC9Q06265 439 aaKnown RBP16.06■□□□□ 0.16
PTCD2-210ENST00000515198 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
PTCD2-210ENST00000515198 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
PTCD2-210ENST00000515198 ARFGEF2Q9Y6D5 1785 aa16.05■□□□□ 0.16
PTCD2-210ENST00000515198 COL11A2P13942 1736 aaPredicted RBP16.05■□□□□ 0.16
PTCD2-210ENST00000515198 TCIRG1Q13488 830 aa16.05■□□□□ 0.16
PTCD2-210ENST00000515198 SUSD4Q5VX71 490 aa16.05■□□□□ 0.16
PTCD2-210ENST00000515198 PHAXQ9H814 394 aaKnown RBP16.05■□□□□ 0.16
PTCD2-210ENST00000515198 CACNA1FO60840 1977 aa16.04■□□□□ 0.16
PTCD2-210ENST00000515198 DDX58O95786 925 aaKnown RBP16.04■□□□□ 0.16
PTCD2-210ENST00000515198 RIC3Q7Z5B4 369 aa16.04■□□□□ 0.16
PTCD2-210ENST00000515198 TTLL6Q8N841 843 aa16.04■□□□□ 0.16
PTCD2-210ENST00000515198 ZNF622Q969S3 477 aaKnown RBP eCLIP16.04■□□□□ 0.16
PTCD2-210ENST00000515198 RNF123Q5XPI4 1314 aa16.03■□□□□ 0.16
PTCD2-210ENST00000515198 E9PSI1 815 aa16.03■□□□□ 0.16
PTCD2-210ENST00000515198 VAMP4O75379 141 aa16.03■□□□□ 0.16
PTCD2-210ENST00000515198 NTSR2O95665 410 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms