RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 INTS3Q68E01 1043 aaKnown RBP8.48□□□□□ -1.05
LDB2-216ENST00000515064 FILIP1Q7Z7B0 1213 aa8.48□□□□□ -1.05
LDB2-216ENST00000515064 TICAM2Q86XR7 235 aa8.48□□□□□ -1.05
LDB2-216ENST00000515064 ZBTB40Q9NUA8 1239 aa8.48□□□□□ -1.05
LDB2-216ENST00000515064 RRP7AQ9Y3A4 280 aaKnown RBP8.48□□□□□ -1.05
LDB2-216ENST00000515064 AK9Q5TCS8 1911 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 FAM135BQ49AJ0 1406 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 OAS2P29728 719 aaKnown RBP8.47□□□□□ -1.05
LDB2-216ENST00000515064 UBE2HP62256 183 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 GIMAP6Q6P9H5 292 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 ATF7IPQ6VMQ6 1270 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 IQUBQ8NA54 791 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 STK26Q9P289 416 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 ZFYVE9O95405 1425 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 RIMS2Q9UQ26 1411 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 PPP1R12AO14974 1030 aaPredicted RBP8.47□□□□□ -1.05
LDB2-216ENST00000515064 CT47B1P0C2W7 299 aaPredicted RBP8.47□□□□□ -1.05
LDB2-216ENST00000515064 ACTN2P35609 894 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 TRDNQ13061 729 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 ZRSR1Q15695 479 aaKnown RBP8.47□□□□□ -1.05
LDB2-216ENST00000515064 ERCC6LQ2NKX8 1250 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 MMS22LQ6ZRQ5 1243 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 RPAINQ86UA6 219 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 CEP89Q96ST8 783 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 EXOC6BQ9Y2D4 811 aa8.47□□□□□ -1.05
LDB2-216ENST00000515064 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.47□□□□□ -1.05
LDB2-216ENST00000515064 WDR33Q9C0J8 1336 aaKnown RBP8.47□□□□□ -1.05
LDB2-216ENST00000515064 EIF3CLB5ME19 914 aaKnown RBP8.46□□□□□ -1.05
LDB2-216ENST00000515064 MCM2P49736 904 aa8.46□□□□□ -1.05
LDB2-216ENST00000515064 ARHGAP29Q52LW3 1261 aa8.46□□□□□ -1.05
LDB2-216ENST00000515064 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.46□□□□□ -1.05
LDB2-216ENST00000515064 TMEM57Q8N5G2 664 aa8.46□□□□□ -1.05
LDB2-216ENST00000515064 TMEM87AQ8NBN3 555 aa8.46□□□□□ -1.05
LDB2-216ENST00000515064 EXOC4Q96A65 974 aa8.46□□□□□ -1.05
LDB2-216ENST00000515064 RUNDC1Q96C34 613 aa8.46□□□□□ -1.05
LDB2-216ENST00000515064 FAM212AQ96EL1 285 aa8.46□□□□□ -1.05
LDB2-216ENST00000515064 SGSM3Q96HU1 749 aa8.46□□□□□ -1.05
LDB2-216ENST00000515064 TMX3Q96JJ7 454 aa8.46□□□□□ -1.05
LDB2-216ENST00000515064 EIF3CQ99613 913 aaKnown RBP8.46□□□□□ -1.05
LDB2-216ENST00000515064 ERBB3P21860 1342 aa8.46□□□□□ -1.05
LDB2-216ENST00000515064 MSH6P52701 1360 aa8.46□□□□□ -1.06
LDB2-216ENST00000515064 ADGRL2O95490 1459 aa8.46□□□□□ -1.06
LDB2-216ENST00000515064 IRF6O14896 467 aa8.46□□□□□ -1.06
LDB2-216ENST00000515064 FAM200AQ8TCP9 573 aa8.46□□□□□ -1.06
LDB2-216ENST00000515064 FUCA2Q9BTY2 467 aa8.46□□□□□ -1.06
LDB2-216ENST00000515064 TRIM5Q9C035 493 aa8.46□□□□□ -1.06
LDB2-216ENST00000515064 PSD3Q9NYI0 1048 aa8.46□□□□□ -1.06
LDB2-216ENST00000515064 CCDC9Q9Y3X0 531 aaKnown RBP8.46□□□□□ -1.06
LDB2-216ENST00000515064 ELP1O95163 1332 aa8.46□□□□□ -1.06
LDB2-216ENST00000515064 TRPM1Q7Z4N2 1603 aa8.46□□□□□ -1.06
LDB2-216ENST00000515064 NUP155O75694 1391 aa8.46□□□□□ -1.06
LDB2-216ENST00000515064 ATAD2Q6PL18 1390 aa8.46□□□□□ -1.06
LDB2-216ENST00000515064 TMEM131LA2VDJ0 1609 aa8.45□□□□□ -1.06
LDB2-216ENST00000515064 CCDC189A1A4V9 331 aa8.45□□□□□ -1.06
LDB2-216ENST00000515064 ATP8B1O43520 1251 aa8.45□□□□□ -1.06
LDB2-216ENST00000515064 NEMFO60524 1076 aa8.45□□□□□ -1.06
LDB2-216ENST00000515064 ZRANB2O95218 330 aaKnown RBP eCLIP8.45□□□□□ -1.06
LDB2-216ENST00000515064 SEMA3FQ13275 785 aa8.45□□□□□ -1.06
LDB2-216ENST00000515064 PPP2R5AQ15172 486 aa8.45□□□□□ -1.06
LDB2-216ENST00000515064 NYAP1Q6ZVC0 841 aa8.45□□□□□ -1.06
LDB2-216ENST00000515064 DDX17Q92841 729 aaKnown RBP8.45□□□□□ -1.06
LDB2-216ENST00000515064 CLIP2Q9UDT6 1046 aa8.45□□□□□ -1.06
LDB2-216ENST00000515064 CHD2O14647 1828 aaKnown RBP8.45□□□□□ -1.06
LDB2-216ENST00000515064 SSR1P43307 286 aaKnown RBP8.45□□□□□ -1.06
LDB2-216ENST00000515064 TCP11L2Q8N4U5 519 aa8.45□□□□□ -1.06
LDB2-216ENST00000515064 DNAAF4Q8WXU2 420 aa8.45□□□□□ -1.06
LDB2-216ENST00000515064 NRBP1Q9UHY1 535 aa8.45□□□□□ -1.06
LDB2-216ENST00000515064 IPO8O15397 1037 aaKnown RBP8.44□□□□□ -1.06
LDB2-216ENST00000515064 CASTP20810 708 aaKnown RBP8.44□□□□□ -1.06
LDB2-216ENST00000515064 ZNF75DP51815 510 aa8.44□□□□□ -1.06
LDB2-216ENST00000515064 NEK4P51957 841 aa8.44□□□□□ -1.06
LDB2-216ENST00000515064 SMC1AQ14683 1233 aaKnown RBP8.44□□□□□ -1.06
LDB2-216ENST00000515064 CACTINQ8WUQ7 758 aaKnown RBP8.44□□□□□ -1.06
LDB2-216ENST00000515064 INTS4Q96HW7 963 aaKnown RBP8.44□□□□□ -1.06
LDB2-216ENST00000515064 NOB1Q9ULX3 412 aaKnown RBP8.44□□□□□ -1.06
LDB2-216ENST00000515064 PLEKHG1Q9ULL1 1385 aa8.44□□□□□ -1.06
LDB2-216ENST00000515064 ADAMTS13Q76LX8 1427 aa8.44□□□□□ -1.06
LDB2-216ENST00000515064 KDM5AP29375 1690 aaKnown RBP8.44□□□□□ -1.06
LDB2-216ENST00000515064 PHLPP1O60346 1717 aa8.44□□□□□ -1.06
LDB2-216ENST00000515064 KIF3CO14782 793 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 GSPT1P15170 499 aaKnown RBP8.43□□□□□ -1.06
LDB2-216ENST00000515064 UBXN4Q92575 508 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 ZCCHC17Q9NP64 241 aaKnown RBP8.43□□□□□ -1.06
LDB2-216ENST00000515064 CNPY2Q9Y2B0 182 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 NWD1Q149M9 1564 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 LRP6O75581 1613 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 NUTM2BA6NNL0 878 aaPredicted RBP8.43□□□□□ -1.06
LDB2-216ENST00000515064 USP27XA6NNY8 438 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 NUTM2EB1AL46 878 aaPredicted RBP8.43□□□□□ -1.06
LDB2-216ENST00000515064 TPM1P09493 284 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 USP8P40818 1118 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 CORO7P57737 925 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 BIRC2Q13490 618 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 LUZP1Q86V48 1076 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 NUTM2AQ8IVF1 878 aaPredicted RBP8.43□□□□□ -1.06
LDB2-216ENST00000515064 EFCAB13Q8IY85 973 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 TRMT1Q9NXH9 659 aaKnown RBP8.43□□□□□ -1.06
LDB2-216ENST00000515064 ADAM21Q9UKJ8 722 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 SH3BP1Q9Y3L3 701 aa8.43□□□□□ -1.06
LDB2-216ENST00000515064 LAMC1P11047 1609 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms