RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 ZNF790Q6PG37 636 aa14.6□□□□□ -0.07
UBE2D3-232ENST00000514755 SLC16A10Q8TF71 515 aa14.6□□□□□ -0.07
UBE2D3-232ENST00000514755 RTF1Q92541 710 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-232ENST00000514755 THUMPD2Q9BTF0 503 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-232ENST00000514755 PPP1R1BQ9UD71 204 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-232ENST00000514755 ADAMTS8Q9UP79 889 aa14.6□□□□□ -0.07
UBE2D3-232ENST00000514755 CNTNAP4Q9C0A0 1308 aa14.6□□□□□ -0.07
UBE2D3-232ENST00000514755 PDE4AP27815 886 aa14.59□□□□□ -0.07
UBE2D3-232ENST00000514755 SSFA2P28290 1259 aa14.59□□□□□ -0.07
UBE2D3-232ENST00000514755 CRKLP46109 303 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-232ENST00000514755 ZNF496Q96IT1 587 aaPredicted RBP14.59□□□□□ -0.07
UBE2D3-232ENST00000514755 MAPK8IP3Q9UPT6 1336 aa14.59□□□□□ -0.07
UBE2D3-232ENST00000514755 BTBD11A6QL63 1104 aa14.58□□□□□ -0.08
UBE2D3-232ENST00000514755 HTATSF1O43719 755 aaKnown RBP14.58□□□□□ -0.08
UBE2D3-232ENST00000514755 NEFMP07197 916 aa14.58□□□□□ -0.08
UBE2D3-232ENST00000514755 MFSD10Q14728 455 aa14.58□□□□□ -0.08
UBE2D3-232ENST00000514755 RC3H1Q5TC82 1133 aaKnown RBP14.58□□□□□ -0.08
UBE2D3-232ENST00000514755 INTS5Q6P9B9 1019 aaKnown RBP14.58□□□□□ -0.08
UBE2D3-232ENST00000514755 TTC5Q8N0Z6 440 aa14.58□□□□□ -0.08
UBE2D3-232ENST00000514755 FLAD1Q8NFF5 587 aa14.58□□□□□ -0.08
UBE2D3-232ENST00000514755 RPS6KA4O75676 772 aa14.57□□□□□ -0.08
UBE2D3-232ENST00000514755 CYP19A1P11511 503 aaPredicted RBP14.57□□□□□ -0.08
UBE2D3-232ENST00000514755 HMGB2P26583 209 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-232ENST00000514755 WDR43Q15061 677 aaKnown RBP eCLIP14.57□□□□□ -0.08
UBE2D3-232ENST00000514755 PNNQ9H307 717 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-232ENST00000514755 MIS18AQ9NYP9 233 aa14.57□□□□□ -0.08
UBE2D3-232ENST00000514755 RRP7AQ9Y3A4 280 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-232ENST00000514755 RTCBQ9Y3I0 505 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-232ENST00000514755 TMPOP42166 694 aaKnown RBP14.56□□□□□ -0.08
UBE2D3-232ENST00000514755 RIPK4P57078 832 aa14.56□□□□□ -0.08
UBE2D3-232ENST00000514755 ARHGEF1Q92888 912 aaKnown RBP14.56□□□□□ -0.08
UBE2D3-232ENST00000514755 ARXQ96QS3 562 aa14.56□□□□□ -0.08
UBE2D3-232ENST00000514755 FHDC1Q9C0D6 1143 aaPredicted RBP14.56□□□□□ -0.08
UBE2D3-232ENST00000514755 GPHNQ9NQX3 736 aaPredicted RBP14.56□□□□□ -0.08
UBE2D3-232ENST00000514755 HEG1Q9ULI3 1381 aa14.56□□□□□ -0.08
UBE2D3-232ENST00000514755 C4AP0C0L4 1744 aa14.55□□□□□ -0.08
UBE2D3-232ENST00000514755 PRAMEF22A3QJZ6 481 aa14.55□□□□□ -0.08
UBE2D3-232ENST00000514755 TRAPPC3LQ5T215 181 aa14.55□□□□□ -0.08
UBE2D3-232ENST00000514755 ZBTB1Q9Y2K1 713 aa14.55□□□□□ -0.08
UBE2D3-232ENST00000514755 ANP32CO43423 234 aa14.54□□□□□ -0.08
UBE2D3-232ENST00000514755 POLD1P28340 1107 aa14.54□□□□□ -0.08
UBE2D3-232ENST00000514755 TAF7Q15545 349 aaPredicted RBP14.54□□□□□ -0.08
UBE2D3-232ENST00000514755 NEUROD2Q15784 382 aa14.54□□□□□ -0.08
UBE2D3-232ENST00000514755 RUNDC1Q96C34 613 aa14.54□□□□□ -0.08
UBE2D3-232ENST00000514755 SYT17Q9BSW7 474 aa14.54□□□□□ -0.08
UBE2D3-232ENST00000514755 FMNL2Q96PY5 1086 aa14.53□□□□□ -0.08
UBE2D3-232ENST00000514755 LARP6Q9BRS8 491 aaKnown RBP14.53□□□□□ -0.08
UBE2D3-232ENST00000514755 CCDC87Q9NVE4 849 aa14.53□□□□□ -0.08
UBE2D3-232ENST00000514755 WDR70Q9NW82 654 aa14.53□□□□□ -0.08
UBE2D3-232ENST00000514755 SRP68Q9UHB9 627 aaKnown RBP14.53□□□□□ -0.08
UBE2D3-232ENST00000514755 KDM3BQ7LBC6 1761 aa14.52□□□□□ -0.08
UBE2D3-232ENST00000514755 SOS1Q07889 1333 aaPredicted RBP14.52□□□□□ -0.08
UBE2D3-232ENST00000514755 KIF3CO14782 793 aa14.52□□□□□ -0.09
UBE2D3-232ENST00000514755 USP16Q9Y5T5 823 aa14.52□□□□□ -0.09
UBE2D3-232ENST00000514755 GYS1P13807 737 aa14.51□□□□□ -0.09
UBE2D3-232ENST00000514755 CANXP27824 592 aaKnown RBP14.51□□□□□ -0.09
UBE2D3-232ENST00000514755 RFC4P35249 363 aa14.51□□□□□ -0.09
UBE2D3-232ENST00000514755 C3orf67Q6ZVT6 689 aa14.51□□□□□ -0.09
UBE2D3-232ENST00000514755 DDX27Q96GQ7 796 aaKnown RBP14.51□□□□□ -0.09
UBE2D3-232ENST00000514755 SENP3-EIF4A1A0A087X0R7 540 aa14.5□□□□□ -0.09
UBE2D3-232ENST00000514755 POTEB2H3BUK9 544 aa14.5□□□□□ -0.09
UBE2D3-232ENST00000514755 A1BGP04217 495 aa14.5□□□□□ -0.09
UBE2D3-232ENST00000514755 PIP4K2AP48426 406 aaPredicted RBP14.5□□□□□ -0.09
UBE2D3-232ENST00000514755 TMEM92Q6UXU6 159 aa14.5□□□□□ -0.09
UBE2D3-232ENST00000514755 TMC2Q8TDI7 906 aa14.5□□□□□ -0.09
UBE2D3-232ENST00000514755 COL15A1P39059 1388 aa14.49□□□□□ -0.09
UBE2D3-232ENST00000514755 USP42Q9H9J4 1324 aaKnown RBP14.49□□□□□ -0.09
UBE2D3-232ENST00000514755 APAF1O14727 1248 aa14.49□□□□□ -0.09
UBE2D3-232ENST00000514755 STARD3NLO95772 234 aa14.49□□□□□ -0.09
UBE2D3-232ENST00000514755 NLGN2Q8NFZ4 835 aa14.49□□□□□ -0.09
UBE2D3-232ENST00000514755 PNISRQ8TF01 805 aaKnown RBP14.49□□□□□ -0.09
UBE2D3-232ENST00000514755 MRS2Q9HD23 443 aa14.49□□□□□ -0.09
UBE2D3-232ENST00000514755 SNRPA1P09661 255 aaKnown RBP14.48□□□□□ -0.09
UBE2D3-232ENST00000514755 POTEJP0CG39 1038 aa14.48□□□□□ -0.09
UBE2D3-232ENST00000514755 EIF4A1P60842 406 aaKnown RBP14.48□□□□□ -0.09
UBE2D3-232ENST00000514755 USPL1Q5W0Q7 1092 aa14.48□□□□□ -0.09
UBE2D3-232ENST00000514755 TEX13AQ9BXU3 409 aaPredicted RBP14.48□□□□□ -0.09
UBE2D3-232ENST00000514755 C2orf72A6NCS6 295 aa14.47□□□□□ -0.09
UBE2D3-232ENST00000514755 MMP10P09238 476 aa14.47□□□□□ -0.09
UBE2D3-232ENST00000514755 EIF5P55010 431 aaKnown RBP14.47□□□□□ -0.09
UBE2D3-232ENST00000514755 BCL2L12Q9HB09 334 aa14.47□□□□□ -0.09
UBE2D3-232ENST00000514755 LMOD3Q0VAK6 560 aa14.46□□□□□ -0.09
UBE2D3-232ENST00000514755 NLGN1Q8N2Q7 840 aa14.46□□□□□ -0.09
UBE2D3-232ENST00000514755 TSPYL4Q9UJ04 414 aa14.46□□□□□ -0.09
UBE2D3-232ENST00000514755 ZNF330Q9Y3S2 320 aaPredicted RBP14.46□□□□□ -0.09
UBE2D3-232ENST00000514755 NBPF26B4DH59 902 aa14.45□□□□□ -0.1
UBE2D3-232ENST00000514755 GIGYF1O75420 1035 aaPredicted RBP14.45□□□□□ -0.1
UBE2D3-232ENST00000514755 FOXK1P85037 733 aa14.45□□□□□ -0.1
UBE2D3-232ENST00000514755 PPP1R15BQ5SWA1 713 aa14.45□□□□□ -0.1
UBE2D3-232ENST00000514755 NBPF10Q6P3W6 841 aaKnown RBP14.45□□□□□ -0.1
UBE2D3-232ENST00000514755 NBPF15Q8N660 670 aa14.45□□□□□ -0.1
UBE2D3-232ENST00000514755 NARFQ9UHQ1 456 aa14.45□□□□□ -0.1
UBE2D3-232ENST00000514755 LAMB4A4D0S4 1761 aa14.45□□□□□ -0.1
UBE2D3-232ENST00000514755 ZPR1O75312 459 aa14.44□□□□□ -0.1
UBE2D3-232ENST00000514755 IL6STP40189 918 aaPredicted RBP14.44□□□□□ -0.1
UBE2D3-232ENST00000514755 DDR1Q08345 913 aa14.44□□□□□ -0.1
UBE2D3-232ENST00000514755 DSG2Q14126 1118 aa14.44□□□□□ -0.1
UBE2D3-232ENST00000514755 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.44□□□□□ -0.1
UBE2D3-232ENST00000514755 TBC1D2BQ9UPU7 963 aa14.44□□□□□ -0.1
UBE2D3-232ENST00000514755 KRT24Q2M2I5 525 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms