RNA–Protein interactions for RNA: ENST00000514693.5

PROM1-217, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-217ENST00000514693 NUCKS1Q9H1E3 243 aaKnown RBP7.52□□□□□ -1.21
PROM1-217ENST00000514693 NSFL1CQ9UNZ2 370 aaKnown RBP7.52□□□□□ -1.21
PROM1-217ENST00000514693 KIAA1024Q9UPX6 916 aa7.52□□□□□ -1.21
PROM1-217ENST00000514693 IGF1RP08069 1367 aa7.51□□□□□ -1.21
PROM1-217ENST00000514693 CELA2BP08218 269 aaPredicted RBP7.51□□□□□ -1.21
PROM1-217ENST00000514693 PHKA2P46019 1235 aa7.51□□□□□ -1.21
PROM1-217ENST00000514693 SEC13P55735 322 aa7.51□□□□□ -1.21
PROM1-217ENST00000514693 OXLD1Q5BKU9 147 aa7.51□□□□□ -1.21
PROM1-217ENST00000514693 GPAMQ9HCL2 828 aa7.51□□□□□ -1.21
PROM1-217ENST00000514693 RBM19Q9Y4C8 960 aaKnown RBP7.51□□□□□ -1.21
PROM1-217ENST00000514693 A0A1B0GTH6 734 aa7.5□□□□□ -1.21
PROM1-217ENST00000514693 RECKO95980 971 aa7.5□□□□□ -1.21
PROM1-217ENST00000514693 MX2P20592 715 aa7.5□□□□□ -1.21
PROM1-217ENST00000514693 GSK3AP49840 483 aa7.5□□□□□ -1.21
PROM1-217ENST00000514693 ZC3H6P61129 1189 aaKnown RBP7.5□□□□□ -1.21
PROM1-217ENST00000514693 PGBD3Q8N328 593 aa7.5□□□□□ -1.21
PROM1-217ENST00000514693 ASB16Q96NS5 453 aa7.5□□□□□ -1.21
PROM1-217ENST00000514693 GTF2IP78347 998 aa7.49□□□□□ -1.21
PROM1-217ENST00000514693 ECM1Q16610 540 aa7.49□□□□□ -1.21
PROM1-217ENST00000514693 CCDC102BQ68D86 513 aa7.49□□□□□ -1.21
PROM1-217ENST00000514693 NEDD1Q8NHV4 660 aa7.49□□□□□ -1.21
PROM1-217ENST00000514693 GTF3C2Q8WUA4 911 aaPredicted RBP7.49□□□□□ -1.21
PROM1-217ENST00000514693 XAGE2Q96GT9 111 aa7.49□□□□□ -1.21
PROM1-217ENST00000514693 DCTN4Q9UJW0 460 aa7.49□□□□□ -1.21
PROM1-217ENST00000514693 SFI1A8K8P3 1242 aa7.48□□□□□ -1.21
PROM1-217ENST00000514693 C21orf2O43822 256 aa7.48□□□□□ -1.21
PROM1-217ENST00000514693 LGR5O75473 907 aa7.48□□□□□ -1.21
PROM1-217ENST00000514693 BCRP11274 1271 aa7.48□□□□□ -1.21
PROM1-217ENST00000514693 TSNAXIP1Q2TAA8 658 aa7.48□□□□□ -1.21
PROM1-217ENST00000514693 KANK3Q6NY19 840 aa7.48□□□□□ -1.21
PROM1-217ENST00000514693 ZSCAN29Q8IWY8 852 aaPredicted RBP7.48□□□□□ -1.21
PROM1-217ENST00000514693 SEPT3Q9UH03 358 aa7.48□□□□□ -1.21
PROM1-217ENST00000514693 PHF24Q9UPV7 400 aa7.48□□□□□ -1.21
PROM1-217ENST00000514693 DNMT3AQ9Y6K1 912 aaPredicted RBP7.48□□□□□ -1.21
PROM1-217ENST00000514693 FKBP4Q02790 459 aaKnown RBP eCLIP7.47□□□□□ -1.21
PROM1-217ENST00000514693 TLR1Q15399 786 aa7.47□□□□□ -1.21
PROM1-217ENST00000514693 PODNQ7Z5L7 613 aa7.47□□□□□ -1.21
PROM1-217ENST00000514693 TPCN2Q8NHX9 752 aa7.47□□□□□ -1.21
PROM1-217ENST00000514693 ARHGAP4P98171 946 aa7.46□□□□□ -1.22
PROM1-217ENST00000514693 MTMR3Q13615 1198 aa7.46□□□□□ -1.22
PROM1-217ENST00000514693 COL19A1Q14993 1142 aa7.46□□□□□ -1.22
PROM1-217ENST00000514693 C4orf17Q53FE4 359 aa7.46□□□□□ -1.22
PROM1-217ENST00000514693 NAALADL2Q58DX5 795 aa7.46□□□□□ -1.22
PROM1-217ENST00000514693 EFHC2Q5JST6 749 aa7.46□□□□□ -1.22
PROM1-217ENST00000514693 RHBDD1Q8TEB9 315 aa7.46□□□□□ -1.22
PROM1-217ENST00000514693 HINFPQ9BQA5 517 aa7.46□□□□□ -1.22
PROM1-217ENST00000514693 MKNK1Q9BUB5 465 aa7.46□□□□□ -1.22
PROM1-217ENST00000514693 CFHR5Q9BXR6 569 aa7.46□□□□□ -1.22
PROM1-217ENST00000514693 FHDC1Q9C0D6 1143 aaPredicted RBP7.46□□□□□ -1.22
PROM1-217ENST00000514693 BCL11AQ9H165 835 aa7.46□□□□□ -1.22
PROM1-217ENST00000514693 ETNK1Q9HBU6 452 aa7.46□□□□□ -1.22
PROM1-217ENST00000514693 PPP1R1BQ9UD71 204 aaPredicted RBP7.46□□□□□ -1.22
PROM1-217ENST00000514693 HRH3Q9Y5N1 445 aa7.46□□□□□ -1.22
PROM1-217ENST00000514693 PHF20L1A8MW92 1017 aa7.45□□□□□ -1.22
PROM1-217ENST00000514693 MAP2K3P46734 347 aa7.45□□□□□ -1.22
PROM1-217ENST00000514693 PSME1Q06323 249 aa7.45□□□□□ -1.22
PROM1-217ENST00000514693 SF3B2Q13435 895 aaKnown RBP7.45□□□□□ -1.22
PROM1-217ENST00000514693 LBRQ14739 615 aaKnown RBP7.45□□□□□ -1.22
PROM1-217ENST00000514693 EAPPQ56P03 285 aaPredicted RBP7.45□□□□□ -1.22
PROM1-217ENST00000514693 ACDQ96AP0 544 aa7.45□□□□□ -1.22
PROM1-217ENST00000514693 RUBCNLQ9H714 662 aa7.45□□□□□ -1.22
PROM1-217ENST00000514693 STAU1O95793 577 aaKnown RBP7.44□□□□□ -1.22
PROM1-217ENST00000514693 MSX1P28360 303 aa7.44□□□□□ -1.22
PROM1-217ENST00000514693 CAPN12Q6ZSI9 719 aa7.44□□□□□ -1.22
PROM1-217ENST00000514693 PPARGC1BQ86YN6 1023 aaKnown RBP7.44□□□□□ -1.22
PROM1-217ENST00000514693 BEND7Q8N7W2 519 aaPredicted RBP7.44□□□□□ -1.22
PROM1-217ENST00000514693 PCDHGA11Q9Y5H2 935 aa7.44□□□□□ -1.22
PROM1-217ENST00000514693 ERCC5P28715 1186 aaPredicted RBP7.43□□□□□ -1.22
PROM1-217ENST00000514693 GDF10P55107 478 aa7.43□□□□□ -1.22
PROM1-217ENST00000514693 GPAT2Q6NUI2 795 aa7.43□□□□□ -1.22
PROM1-217ENST00000514693 RGL4Q8IZJ4 473 aa7.43□□□□□ -1.22
PROM1-217ENST00000514693 UBXN4Q92575 508 aa7.43□□□□□ -1.22
PROM1-217ENST00000514693 OXCT2Q9BYC2 517 aaPredicted RBP7.43□□□□□ -1.22
PROM1-217ENST00000514693 BACH2Q9BYV9 841 aa7.43□□□□□ -1.22
PROM1-217ENST00000514693 LRRC4BQ9NT99 713 aa7.43□□□□□ -1.22
PROM1-217ENST00000514693 SMARCA5O60264 1052 aaPredicted RBP7.42□□□□□ -1.22
PROM1-217ENST00000514693 INHAP05111 366 aa7.42□□□□□ -1.22
PROM1-217ENST00000514693 WEE1P30291 646 aa7.42□□□□□ -1.22
PROM1-217ENST00000514693 PLA2G4AP47712 749 aa7.42□□□□□ -1.22
PROM1-217ENST00000514693 FKBP5Q13451 457 aaPredicted RBP7.42□□□□□ -1.22
PROM1-217ENST00000514693 SF3A1Q15459 793 aaKnown RBP7.42□□□□□ -1.22
PROM1-217ENST00000514693 CANXP27824 592 aaKnown RBP7.41□□□□□ -1.22
PROM1-217ENST00000514693 FOXK2Q01167 660 aa7.41□□□□□ -1.22
PROM1-217ENST00000514693 AIDAQ96BJ3 306 aa7.41□□□□□ -1.22
PROM1-217ENST00000514693 NIFKQ9BYG3 293 aaKnown RBP7.41□□□□□ -1.22
PROM1-217ENST00000514693 ATXN7L1Q9ULK2 861 aaPredicted RBP7.41□□□□□ -1.22
PROM1-217ENST00000514693 CNTNAP5Q8WYK1 1306 aa7.41□□□□□ -1.22
PROM1-217ENST00000514693 OIP5O43482 229 aa7.4□□□□□ -1.22
PROM1-217ENST00000514693 PTCD1O75127 700 aaKnown RBP7.4□□□□□ -1.22
PROM1-217ENST00000514693 IGHA1P01876 353 aa7.4□□□□□ -1.22
PROM1-217ENST00000514693 P4HBP07237 508 aaKnown RBP7.4□□□□□ -1.22
PROM1-217ENST00000514693 THBS1P07996 1170 aa7.4□□□□□ -1.22
PROM1-217ENST00000514693 BMP4P12644 408 aa7.4□□□□□ -1.22
PROM1-217ENST00000514693 SCNN1DP51172 638 aa7.4□□□□□ -1.22
PROM1-217ENST00000514693 MRPL58Q14197 206 aaKnown RBP7.4□□□□□ -1.22
PROM1-217ENST00000514693 TSEN2Q8NCE0 465 aaKnown RBP7.4□□□□□ -1.22
PROM1-217ENST00000514693 SPATA32Q96LK8 384 aa7.4□□□□□ -1.22
PROM1-217ENST00000514693 GDF2Q9UK05 429 aaPredicted RBP7.4□□□□□ -1.22
PROM1-217ENST00000514693 SCAMP3O14828 347 aaKnown RBP7.39□□□□□ -1.23
PROM1-217ENST00000514693 SMTNP53814 917 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms