RNA–Protein interactions for RNA: ENST00000514099.5

GRAMD2B-215, Transcript of GRAM domain containing 2B, humanhuman

TSL 2

Gene GRAMD2B, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-215ENST00000514099 CHPF2Q9P2E5 772 aa27.3■■□□□ 1.96
GRAMD2B-215ENST00000514099 N4BP2Q86UW6 1770 aaPredicted RBP27.29■■□□□ 1.96
GRAMD2B-215ENST00000514099 CARMIL3Q8ND23 1372 aa27.29■■□□□ 1.96
GRAMD2B-215ENST00000514099 FANCIQ9NVI1 1328 aa27.28■■□□□ 1.96
GRAMD2B-215ENST00000514099 SERPINB2P05120 415 aa27.28■■□□□ 1.96
GRAMD2B-215ENST00000514099 HLFQ16534 295 aa27.28■■□□□ 1.96
GRAMD2B-215ENST00000514099 ZNF652Q9Y2D9 606 aa27.28■■□□□ 1.96
GRAMD2B-215ENST00000514099 NUP98P52948 1817 aa27.28■■□□□ 1.96
GRAMD2B-215ENST00000514099 MAP3K15Q6ZN16 1313 aa27.27■■□□□ 1.96
GRAMD2B-215ENST00000514099 ZNF521Q96K83 1311 aa27.27■■□□□ 1.96
GRAMD2B-215ENST00000514099 CLEC4GQ6UXB4 293 aa27.27■■□□□ 1.96
GRAMD2B-215ENST00000514099 KIF6Q6ZMV9 814 aa27.27■■□□□ 1.96
GRAMD2B-215ENST00000514099 TSPYL6Q8N831 410 aa27.27■■□□□ 1.96
GRAMD2B-215ENST00000514099 SPINK5Q9NQ38 1064 aaPredicted RBP27.27■■□□□ 1.96
GRAMD2B-215ENST00000514099 DDX21Q9NR30 783 aaKnown RBP eCLIP27.27■■□□□ 1.96
GRAMD2B-215ENST00000514099 ZBTB3Q9H5J0 574 aa27.26■■□□□ 1.96
GRAMD2B-215ENST00000514099 RGL2O15211 777 aa27.26■■□□□ 1.95
GRAMD2B-215ENST00000514099 SETDB2Q96T68 719 aa27.25■■□□□ 1.95
GRAMD2B-215ENST00000514099 ERVV-1B6SEH8 477 aa27.24■■□□□ 1.95
GRAMD2B-215ENST00000514099 PELP1Q8IZL8 1130 aaKnown RBP27.23■■□□□ 1.95
GRAMD2B-215ENST00000514099 XAGE3Q8WTP9 111 aa27.23■■□□□ 1.95
GRAMD2B-215ENST00000514099 DBF4Q9UBU7 674 aaPredicted RBP27.23■■□□□ 1.95
GRAMD2B-215ENST00000514099 WWC3Q9ULE0 1092 aa27.23■■□□□ 1.95
GRAMD2B-215ENST00000514099 ATP10DQ9P241 1426 aa27.23■■□□□ 1.95
GRAMD2B-215ENST00000514099 ANKRD31Q8N7Z5 1873 aa27.23■■□□□ 1.95
GRAMD2B-215ENST00000514099 COPS6Q7L5N1 327 aa27.22■■□□□ 1.95
GRAMD2B-215ENST00000514099 NIP7Q9Y221 180 aaKnown RBP eCLIP27.22■■□□□ 1.95
GRAMD2B-215ENST00000514099 BRCA1P38398 1863 aaKnown RBP27.22■■□□□ 1.95
GRAMD2B-215ENST00000514099 DCAF8L1A6NGE4 600 aa27.21■■□□□ 1.95
GRAMD2B-215ENST00000514099 TGFB2P61812 414 aa27.21■■□□□ 1.95
GRAMD2B-215ENST00000514099 AIMP1Q12904 312 aaKnown RBP27.21■■□□□ 1.95
GRAMD2B-215ENST00000514099 PRR5LQ6MZQ0 368 aa27.21■■□□□ 1.95
GRAMD2B-215ENST00000514099 A0A0G2JLW4 131 aa27.2■■□□□ 1.94
GRAMD2B-215ENST00000514099 DPEP1P16444 411 aa27.2■■□□□ 1.94
GRAMD2B-215ENST00000514099 YBX3P16989 372 aaKnown RBP eCLIP27.2■■□□□ 1.94
GRAMD2B-215ENST00000514099 GPR162Q16538 588 aa27.2■■□□□ 1.94
GRAMD2B-215ENST00000514099 TWISTNBQ3B726 338 aaPredicted RBP27.2■■□□□ 1.94
GRAMD2B-215ENST00000514099 ANKRD36CQ5JPF3 1778 aa27.19■■□□□ 1.94
GRAMD2B-215ENST00000514099 CCDC24Q8N4L8 307 aa27.19■■□□□ 1.94
GRAMD2B-215ENST00000514099 CNBD1Q8NA66 436 aa27.19■■□□□ 1.94
GRAMD2B-215ENST00000514099 GIGYF2Q6Y7W6 1299 aaKnown RBP27.18■■□□□ 1.94
GRAMD2B-215ENST00000514099 NBPF5PQ86XG9 351 aaPredicted RBP27.17■■□□□ 1.94
GRAMD2B-215ENST00000514099 MYH16Q9H6N6 1097 aa27.17■■□□□ 1.94
GRAMD2B-215ENST00000514099 HYPKQ9NX55 129 aa27.17■■□□□ 1.94
GRAMD2B-215ENST00000514099 DLEC1Q9Y238 1755 aa27.17■■□□□ 1.94
GRAMD2B-215ENST00000514099 UBN2Q6ZU65 1347 aa27.17■■□□□ 1.94
GRAMD2B-215ENST00000514099 COL11A2P13942 1736 aaPredicted RBP27.17■■□□□ 1.94
GRAMD2B-215ENST00000514099 GPTP24298 496 aa27.16■■□□□ 1.94
GRAMD2B-215ENST00000514099 CHRNA5P30532 468 aa27.16■■□□□ 1.94
GRAMD2B-215ENST00000514099 EXOSC9Q06265 439 aaKnown RBP27.16■■□□□ 1.94
GRAMD2B-215ENST00000514099 GOLGA2Q08379 1002 aa27.16■■□□□ 1.94
GRAMD2B-215ENST00000514099 KCNA3P22001 575 aa27.16■■□□□ 1.94
GRAMD2B-215ENST00000514099 CCDC30Q5VVM6 783 aa27.16■■□□□ 1.94
GRAMD2B-215ENST00000514099 ARFGEF2Q9Y6D5 1785 aa27.15■■□□□ 1.94
GRAMD2B-215ENST00000514099 FAM177BA6PVY3 158 aa27.15■■□□□ 1.94
GRAMD2B-215ENST00000514099 NPHP1O15259 732 aa27.15■■□□□ 1.94
GRAMD2B-215ENST00000514099 TCERG1O14776 1098 aaKnown RBP27.14■■□□□ 1.94
GRAMD2B-215ENST00000514099 PHAXQ9H814 394 aaKnown RBP27.14■■□□□ 1.94
GRAMD2B-215ENST00000514099 ZNF34Q8IZ26 560 aa27.13■■□□□ 1.93
GRAMD2B-215ENST00000514099 ST5P78524 1137 aa27.12■■□□□ 1.93
GRAMD2B-215ENST00000514099 BRIP1Q9BX63 1249 aa27.11■■□□□ 1.93
GRAMD2B-215ENST00000514099 CHMP4AQ9BY43 222 aa27.11■■□□□ 1.93
GRAMD2B-215ENST00000514099 TNRC6CQ9HCJ0 1690 aaKnown RBP27.11■■□□□ 1.93
GRAMD2B-215ENST00000514099 ANKRD13DQ6ZTN6 518 aa27.11■■□□□ 1.93
GRAMD2B-215ENST00000514099 PLBD2Q8NHP8 589 aa27.11■■□□□ 1.93
GRAMD2B-215ENST00000514099 IBTKQ9P2D0 1353 aaPredicted RBP27.1■■□□□ 1.93
GRAMD2B-215ENST00000514099 VAMP4O75379 141 aa27.1■■□□□ 1.93
GRAMD2B-215ENST00000514099 TPTE2Q6XPS3 522 aa27.1■■□□□ 1.93
GRAMD2B-215ENST00000514099 ABCC12Q96J65 1359 aa27.1■■□□□ 1.93
GRAMD2B-215ENST00000514099 SUSD4Q5VX71 490 aa27.09■■□□□ 1.93
GRAMD2B-215ENST00000514099 C2CD5Q86YS7 1000 aa27.09■■□□□ 1.93
GRAMD2B-215ENST00000514099 STK31Q9BXU1 1019 aa27.09■■□□□ 1.93
GRAMD2B-215ENST00000514099 BCS1LQ9Y276 419 aa27.09■■□□□ 1.93
GRAMD2B-215ENST00000514099 E9PSI1 815 aa27.08■■□□□ 1.93
GRAMD2B-215ENST00000514099 HSP90AB3PQ58FF7 597 aa27.08■■□□□ 1.93
GRAMD2B-215ENST00000514099 NUTM1Q86Y26 1132 aa27.08■■□□□ 1.93
GRAMD2B-215ENST00000514099 PIM2Q9P1W9 311 aa27.08■■□□□ 1.93
GRAMD2B-215ENST00000514099 ARFGEF1Q9Y6D6 1849 aa27.08■■□□□ 1.93
GRAMD2B-215ENST00000514099 NTSR2O95665 410 aa27.07■■□□□ 1.92
GRAMD2B-215ENST00000514099 PDE6BP35913 854 aa27.07■■□□□ 1.92
GRAMD2B-215ENST00000514099 TCIRG1Q13488 830 aa27.07■■□□□ 1.92
GRAMD2B-215ENST00000514099 CDCA7LQ96GN5 454 aa27.07■■□□□ 1.92
GRAMD2B-215ENST00000514099 SLFN5Q08AF3 891 aa27.06■■□□□ 1.92
GRAMD2B-215ENST00000514099 PARP10Q53GL7 1025 aa27.06■■□□□ 1.92
GRAMD2B-215ENST00000514099 NYXQ9GZU5 481 aa27.06■■□□□ 1.92
GRAMD2B-215ENST00000514099 CHD4Q14839 1912 aa27.06■■□□□ 1.92
GRAMD2B-215ENST00000514099 H0YIN7 160 aa27.06■■□□□ 1.92
GRAMD2B-215ENST00000514099 GRIN3BO60391 1043 aa27.06■■□□□ 1.92
GRAMD2B-215ENST00000514099 GTF2E1P29083 439 aaPredicted RBP27.05■■□□□ 1.92
GRAMD2B-215ENST00000514099 ERFEQ4G0M1 354 aa27.05■■□□□ 1.92
GRAMD2B-215ENST00000514099 NLRP10Q86W26 655 aa27.05■■□□□ 1.92
GRAMD2B-215ENST00000514099 SLC4A2P04920 1241 aa27.04■■□□□ 1.92
GRAMD2B-215ENST00000514099 DALRD3Q5D0E6 543 aaKnown RBP27.04■■□□□ 1.92
GRAMD2B-215ENST00000514099 G2E3Q7L622 706 aa27.04■■□□□ 1.92
GRAMD2B-215ENST00000514099 RIC3Q7Z5B4 369 aa27.04■■□□□ 1.92
GRAMD2B-215ENST00000514099 CACNA1FO60840 1977 aa27.03■■□□□ 1.92
GRAMD2B-215ENST00000514099 PPP1R42Q7Z4L9 355 aa27.03■■□□□ 1.92
GRAMD2B-215ENST00000514099 ZNF428Q96B54 188 aa27.03■■□□□ 1.92
GRAMD2B-215ENST00000514099 RIC1Q4ADV7 1423 aa27.03■■□□□ 1.92
GRAMD2B-215ENST00000514099 CACNA1SQ13698 1873 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms