RNA–Protein interactions for RNA: ENST00000513821.5

SGCA-209, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,090 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-209ENST00000513821 ST5P78524 1137 aa17.99■□□□□ 0.47
SGCA-209ENST00000513821 CNBD1Q8NA66 436 aa17.99■□□□□ 0.47
SGCA-209ENST00000513821 NIP7Q9Y221 180 aaKnown RBP eCLIP17.99■□□□□ 0.47
SGCA-209ENST00000513821 MAP3K15Q6ZN16 1313 aa17.98■□□□□ 0.47
SGCA-209ENST00000513821 CCDC27Q2M243 656 aa17.98■□□□□ 0.47
SGCA-209ENST00000513821 PRR5LQ6MZQ0 368 aa17.98■□□□□ 0.47
SGCA-209ENST00000513821 ARHGAP27Q6ZUM4 889 aa17.98■□□□□ 0.47
SGCA-209ENST00000513821 NBPF5PQ86XG9 351 aaPredicted RBP17.98■□□□□ 0.47
SGCA-209ENST00000513821 C2CD5Q86YS7 1000 aa17.98■□□□□ 0.47
SGCA-209ENST00000513821 PDIA6Q15084 440 aa17.97■□□□□ 0.47
SGCA-209ENST00000513821 HLFQ16534 295 aa17.97■□□□□ 0.47
SGCA-209ENST00000513821 TTLL6Q8N841 843 aa17.97■□□□□ 0.47
SGCA-209ENST00000513821 ZNF784Q8NCA9 323 aaPredicted RBP17.97■□□□□ 0.47
SGCA-209ENST00000513821 DDX21Q9NR30 783 aaKnown RBP eCLIP17.97■□□□□ 0.47
SGCA-209ENST00000513821 GTF2E1P29083 439 aaPredicted RBP17.96■□□□□ 0.47
SGCA-209ENST00000513821 TTLL7Q6ZT98 887 aa17.96■□□□□ 0.47
SGCA-209ENST00000513821 MBIPQ9NS73 344 aa17.96■□□□□ 0.47
SGCA-209ENST00000513821 N4BP2Q86UW6 1770 aaPredicted RBP17.95■□□□□ 0.46
SGCA-209ENST00000513821 GIGYF2Q6Y7W6 1299 aaKnown RBP17.95■□□□□ 0.46
SGCA-209ENST00000513821 NECTIN2Q92692 538 aa17.95■□□□□ 0.46
SGCA-209ENST00000513821 NYXQ9GZU5 481 aa17.95■□□□□ 0.46
SGCA-209ENST00000513821 AFDNP55196 1824 aaKnown RBP17.94■□□□□ 0.46
SGCA-209ENST00000513821 DUSP27Q5VZP5 1158 aa17.94■□□□□ 0.46
SGCA-209ENST00000513821 WWC1Q8IX03 1113 aa17.94■□□□□ 0.46
SGCA-209ENST00000513821 ZNF622Q969S3 477 aaKnown RBP eCLIP17.94■□□□□ 0.46
SGCA-209ENST00000513821 DBF4Q9UBU7 674 aaPredicted RBP17.94■□□□□ 0.46
SGCA-209ENST00000513821 NRXN2Q9P2S2 1712 aa17.94■□□□□ 0.46
SGCA-209ENST00000513821 KRT24Q2M2I5 525 aa17.93■□□□□ 0.46
SGCA-209ENST00000513821 HDGFL1Q5TGJ6 251 aa17.93■□□□□ 0.46
SGCA-209ENST00000513821 COPS6Q7L5N1 327 aa17.93■□□□□ 0.46
SGCA-209ENST00000513821 ZBTB3Q9H5J0 574 aa17.93■□□□□ 0.46
SGCA-209ENST00000513821 LAMB4A4D0S4 1761 aa17.93■□□□□ 0.46
SGCA-209ENST00000513821 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
SGCA-209ENST00000513821 PARP10Q53GL7 1025 aa17.92■□□□□ 0.46
SGCA-209ENST00000513821 HSP90AB3PQ58FF7 597 aa17.92■□□□□ 0.46
SGCA-209ENST00000513821 LRP10Q7Z4F1 713 aa17.92■□□□□ 0.46
SGCA-209ENST00000513821 ZNF34Q8IZ26 560 aa17.92■□□□□ 0.46
SGCA-209ENST00000513821 FAM9BQ8IZU0 186 aa17.92■□□□□ 0.46
SGCA-209ENST00000513821 CCDC24Q8N4L8 307 aa17.92■□□□□ 0.46
SGCA-209ENST00000513821 CNKSR1Q969H4 720 aa17.92■□□□□ 0.46
SGCA-209ENST00000513821 HYPKQ9NX55 129 aa17.92■□□□□ 0.46
SGCA-209ENST00000513821 FAM177BA6PVY3 158 aa17.91■□□□□ 0.46
SGCA-209ENST00000513821 AIMP1Q12904 312 aaKnown RBP17.91■□□□□ 0.46
SGCA-209ENST00000513821 STYK1Q6J9G0 422 aa17.91■□□□□ 0.46
SGCA-209ENST00000513821 PPP1R42Q7Z4L9 355 aa17.91■□□□□ 0.46
SGCA-209ENST00000513821 MASTLQ96GX5 879 aa17.91■□□□□ 0.46
SGCA-209ENST00000513821 KIAA1551Q9HCM1 1747 aa17.91■□□□□ 0.46
SGCA-209ENST00000513821 IL16Q14005 1332 aa17.91■□□□□ 0.46
SGCA-209ENST00000513821 KLRG2A4D1S0 409 aaPredicted RBP17.9■□□□□ 0.46
SGCA-209ENST00000513821 ANXA1P04083 346 aa17.9■□□□□ 0.46
SGCA-209ENST00000513821 SRGNP10124 158 aa17.9■□□□□ 0.46
SGCA-209ENST00000513821 PROSER3Q2NL68 480 aa17.9■□□□□ 0.46
SGCA-209ENST00000513821 WDR63Q8IWG1 891 aa17.9■□□□□ 0.46
SGCA-209ENST00000513821 XAGE3Q8WTP9 111 aa17.9■□□□□ 0.46
SGCA-209ENST00000513821 CHPF2Q9P2E5 772 aa17.9■□□□□ 0.46
SGCA-209ENST00000513821 ANKRD13DQ6ZTN6 518 aa17.89■□□□□ 0.45
SGCA-209ENST00000513821 BCORQ6W2J9 1755 aa17.89■□□□□ 0.45
SGCA-209ENST00000513821 ATP10DQ9P241 1426 aa17.89■□□□□ 0.45
SGCA-209ENST00000513821 ELL2O00472 640 aaPredicted RBP17.88■□□□□ 0.45
SGCA-209ENST00000513821 NPR1P16066 1061 aa17.88■□□□□ 0.45
SGCA-209ENST00000513821 GPTP24298 496 aa17.88■□□□□ 0.45
SGCA-209ENST00000513821 CCDC30Q5VVM6 783 aa17.88■□□□□ 0.45
SGCA-209ENST00000513821 UTRNP46939 3433 aa17.87■□□□□ 0.45
SGCA-209ENST00000513821 ALDH1B1P30837 517 aa17.87■□□□□ 0.45
SGCA-209ENST00000513821 TCIRG1Q13488 830 aa17.87■□□□□ 0.45
SGCA-209ENST00000513821 SOGA3Q5TF21 947 aa17.87■□□□□ 0.45
SGCA-209ENST00000513821 SUSD4Q5VX71 490 aa17.87■□□□□ 0.45
SGCA-209ENST00000513821 C8orf58Q8NAV2 365 aa17.87■□□□□ 0.45
SGCA-209ENST00000513821 PLBD2Q8NHP8 589 aa17.87■□□□□ 0.45
SGCA-209ENST00000513821 BRCA1P38398 1863 aaKnown RBP17.86■□□□□ 0.45
SGCA-209ENST00000513821 UTP14AQ9BVJ6 771 aaKnown RBP17.86■□□□□ 0.45
SGCA-209ENST00000513821 SALL2Q9Y467 1007 aaPredicted RBP17.86■□□□□ 0.45
SGCA-209ENST00000513821 GOLGB1Q14789 3259 aaKnown RBP17.86■□□□□ 0.45
SGCA-209ENST00000513821 NUP98P52948 1817 aa17.85■□□□□ 0.45
SGCA-209ENST00000513821 ERFEQ4G0M1 354 aa17.85■□□□□ 0.45
SGCA-209ENST00000513821 C9orf131Q5VYM1 1079 aa17.85■□□□□ 0.45
SGCA-209ENST00000513821 GPBP1L1Q9HC44 474 aaPredicted RBP17.85■□□□□ 0.45
SGCA-209ENST00000513821 IBTKQ9P2D0 1353 aaPredicted RBP17.85■□□□□ 0.45
SGCA-209ENST00000513821 ARFGEF1Q9Y6D6 1849 aa17.85■□□□□ 0.45
SGCA-209ENST00000513821 RNF123Q5XPI4 1314 aa17.84■□□□□ 0.45
SGCA-209ENST00000513821 C21orf2O43822 256 aa17.84■□□□□ 0.45
SGCA-209ENST00000513821 SLC10A5Q5PT55 438 aa17.84■□□□□ 0.45
SGCA-209ENST00000513821 NUTM1Q86Y26 1132 aa17.84■□□□□ 0.45
SGCA-209ENST00000513821 UBN2Q6ZU65 1347 aa17.83■□□□□ 0.44
SGCA-209ENST00000513821 SENP3-EIF4A1A0A087X0R7 540 aa17.83■□□□□ 0.44
SGCA-209ENST00000513821 NTSR2O95665 410 aa17.83■□□□□ 0.44
SGCA-209ENST00000513821 LMNB1P20700 586 aa17.83■□□□□ 0.44
SGCA-209ENST00000513821 NLRP3Q96P20 1036 aa17.83■□□□□ 0.44
SGCA-209ENST00000513821 RNF181Q9P0P0 153 aa17.83■□□□□ 0.44
SGCA-209ENST00000513821 DDX58O95786 925 aaKnown RBP17.82■□□□□ 0.44
SGCA-209ENST00000513821 GOLGA2Q08379 1002 aa17.82■□□□□ 0.44
SGCA-209ENST00000513821 PRPF40BQ6NWY9 871 aaKnown RBP17.82■□□□□ 0.44
SGCA-209ENST00000513821 RIC3Q7Z5B4 369 aa17.82■□□□□ 0.44
SGCA-209ENST00000513821 NLRP10Q86W26 655 aa17.82■□□□□ 0.44
SGCA-209ENST00000513821 TSR2Q969E8 191 aaKnown RBP17.82■□□□□ 0.44
SGCA-209ENST00000513821 STK31Q9BXU1 1019 aa17.82■□□□□ 0.44
SGCA-209ENST00000513821 ANKRD31Q8N7Z5 1873 aa17.82■□□□□ 0.44
SGCA-209ENST00000513821 ADCY9O60503 1353 aa17.81■□□□□ 0.44
SGCA-209ENST00000513821 CCER2I3L3R5 266 aa17.81■□□□□ 0.44
SGCA-209ENST00000513821 TRIM28Q13263 835 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms