RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 ADGRL3Q9HAR2 1447 aa9.48□□□□□ -0.89
HMGN1P17-201ENST00000513734 SRPK2P78362 688 aaKnown RBP9.48□□□□□ -0.89
HMGN1P17-201ENST00000513734 RETREG2Q8NC44 543 aa9.48□□□□□ -0.89
HMGN1P17-201ENST00000513734 DDX17Q92841 729 aaKnown RBP9.47□□□□□ -0.89
HMGN1P17-201ENST00000513734 SLC10A4Q96EP9 437 aa9.47□□□□□ -0.89
HMGN1P17-201ENST00000513734 MPHOSPH9Q99550 1183 aa9.47□□□□□ -0.89
HMGN1P17-201ENST00000513734 ADGRF5Q8IZF2 1346 aa9.47□□□□□ -0.89
HMGN1P17-201ENST00000513734 CCDC144AA2RUR9 1427 aa9.47□□□□□ -0.89
HMGN1P17-201ENST00000513734 DCCP43146 1447 aa9.47□□□□□ -0.89
HMGN1P17-201ENST00000513734 PTCH1Q13635 1447 aa9.47□□□□□ -0.89
HMGN1P17-201ENST00000513734 SETD5Q9C0A6 1442 aa9.47□□□□□ -0.89
HMGN1P17-201ENST00000513734 LAMC1P11047 1609 aa9.46□□□□□ -0.89
HMGN1P17-201ENST00000513734 USP17L3A6NCW0 530 aa9.46□□□□□ -0.9
HMGN1P17-201ENST00000513734 USP17L4A6NCW7 530 aa9.46□□□□□ -0.9
HMGN1P17-201ENST00000513734 USP17L5A8MUK1 530 aa9.46□□□□□ -0.9
HMGN1P17-201ENST00000513734 ATF3P18847 181 aa9.46□□□□□ -0.9
HMGN1P17-201ENST00000513734 USP17L2Q6R6M4 530 aa9.46□□□□□ -0.9
HMGN1P17-201ENST00000513734 BRINP3Q76B58 766 aa9.46□□□□□ -0.9
HMGN1P17-201ENST00000513734 USP17L1Q7RTZ2 530 aa9.46□□□□□ -0.9
HMGN1P17-201ENST00000513734 DEPDC4Q8N2C3 294 aa9.46□□□□□ -0.9
HMGN1P17-201ENST00000513734 PHTF2Q8N3S3 785 aa9.46□□□□□ -0.9
HMGN1P17-201ENST00000513734 C1QTNF2Q9BXJ5 285 aa9.46□□□□□ -0.9
HMGN1P17-201ENST00000513734 C19orf44Q9H6X5 657 aa9.46□□□□□ -0.9
HMGN1P17-201ENST00000513734 RAB3GAP2Q9H2M9 1393 aa9.46□□□□□ -0.9
HMGN1P17-201ENST00000513734 GIGYF1O75420 1035 aaPredicted RBP9.45□□□□□ -0.9
HMGN1P17-201ENST00000513734 RPIAP49247 311 aa9.45□□□□□ -0.9
HMGN1P17-201ENST00000513734 SKOR1P84550 965 aa9.45□□□□□ -0.9
HMGN1P17-201ENST00000513734 RGL3Q3MIN7 710 aa9.45□□□□□ -0.9
HMGN1P17-201ENST00000513734 POTEAQ6S8J7 498 aa9.45□□□□□ -0.9
HMGN1P17-201ENST00000513734 PLPP7Q8NBV4 271 aa9.45□□□□□ -0.9
HMGN1P17-201ENST00000513734 VRTNQ9H8Y1 702 aa9.45□□□□□ -0.9
HMGN1P17-201ENST00000513734 JCADQ9P266 1359 aa9.45□□□□□ -0.9
HMGN1P17-201ENST00000513734 PRAG1Q86YV5 1406 aa9.45□□□□□ -0.9
HMGN1P17-201ENST00000513734 FMN2Q9NZ56 1722 aa9.45□□□□□ -0.9
HMGN1P17-201ENST00000513734 WNT7BP56706 349 aa9.44□□□□□ -0.9
HMGN1P17-201ENST00000513734 MARF1Q9Y4F3 1742 aaKnown RBP9.43□□□□□ -0.9
HMGN1P17-201ENST00000513734 CDC42BPGQ6DT37 1551 aa9.43□□□□□ -0.9
HMGN1P17-201ENST00000513734 C1orf167Q5SNV9 1468 aa9.43□□□□□ -0.9
HMGN1P17-201ENST00000513734 PIK3C2GO75747 1445 aa9.43□□□□□ -0.9
HMGN1P17-201ENST00000513734 PLEKHH1Q9ULM0 1364 aa9.43□□□□□ -0.9
HMGN1P17-201ENST00000513734 CD2BP2O95400 341 aaKnown RBP9.43□□□□□ -0.9
HMGN1P17-201ENST00000513734 TSGA10IPQ3SY00 556 aa9.43□□□□□ -0.9
HMGN1P17-201ENST00000513734 PLEKHM2Q8IWE5 1019 aa9.43□□□□□ -0.9
HMGN1P17-201ENST00000513734 RPGRIP1LQ68CZ1 1315 aa9.42□□□□□ -0.9
HMGN1P17-201ENST00000513734 VARSP26640 1264 aaKnown RBP9.42□□□□□ -0.9
HMGN1P17-201ENST00000513734 NCOA4Q13772 614 aa9.42□□□□□ -0.9
HMGN1P17-201ENST00000513734 NBPF20Q3BBV1 942 aa9.42□□□□□ -0.9
HMGN1P17-201ENST00000513734 LIAT1Q6ZQX7 453 aa9.42□□□□□ -0.9
HMGN1P17-201ENST00000513734 TRMT44Q8IYL2 757 aaKnown RBP9.42□□□□□ -0.9
HMGN1P17-201ENST00000513734 NRXN1Q9ULB1 1477 aa9.41□□□□□ -0.9
HMGN1P17-201ENST00000513734 CSB-PGBD3P0DP91 1061 aa9.41□□□□□ -0.9
HMGN1P17-201ENST00000513734 MAP7D1Q3KQU3 841 aa9.41□□□□□ -0.9
HMGN1P17-201ENST00000513734 TMEM132EQ6IEE7 984 aa9.41□□□□□ -0.9
HMGN1P17-201ENST00000513734 MKRN1Q9UHC7 482 aaKnown RBP9.41□□□□□ -0.9
HMGN1P17-201ENST00000513734 TECPR2O15040 1411 aa9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 ATG7O95352 703 aa9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 RC3H1Q5TC82 1133 aaKnown RBP9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 RNF20Q5VTR2 975 aa9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 WAPLQ7Z5K2 1190 aa9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 EHBP1Q8NDI1 1231 aa9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 ORAI2Q96SN7 254 aa9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 TRAIPQ9BWF2 469 aa9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 STK26Q9P289 416 aa9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 CDV3Q9UKY7 258 aaKnown RBP9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 DOLKQ9UPQ8 538 aa9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 USP32Q8NFA0 1604 aa9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 COL22A1Q8NFW1 1626 aaPredicted RBP9.4□□□□□ -0.9
HMGN1P17-201ENST00000513734 MYOM2P54296 1465 aa9.4□□□□□ -0.91
HMGN1P17-201ENST00000513734 PNPLA6Q8IY17 1366 aa9.39□□□□□ -0.91
HMGN1P17-201ENST00000513734 SLC19A1P41440 591 aa9.39□□□□□ -0.91
HMGN1P17-201ENST00000513734 RAB15P59190 212 aa9.39□□□□□ -0.91
HMGN1P17-201ENST00000513734 EML3Q32P44 896 aa9.39□□□□□ -0.91
HMGN1P17-201ENST00000513734 OXLD1Q5BKU9 147 aa9.39□□□□□ -0.91
HMGN1P17-201ENST00000513734 IFFO2Q5TF58 517 aa9.39□□□□□ -0.91
HMGN1P17-201ENST00000513734 EMID1Q96A84 441 aaPredicted RBP9.39□□□□□ -0.91
HMGN1P17-201ENST00000513734 ARHGEF28Q8N1W1 1705 aaKnown RBP9.39□□□□□ -0.91
HMGN1P17-201ENST00000513734 ABCA3Q99758 1704 aa9.39□□□□□ -0.91
HMGN1P17-201ENST00000513734 YTHDC2Q9H6S0 1430 aaKnown RBP9.39□□□□□ -0.91
HMGN1P17-201ENST00000513734 LRPPRCP42704 1394 aaKnown RBP9.38□□□□□ -0.91
HMGN1P17-201ENST00000513734 ANKRD30BQ9BXX2 1392 aa9.38□□□□□ -0.91
HMGN1P17-201ENST00000513734 ADGRB1O14514 1584 aa9.38□□□□□ -0.91
HMGN1P17-201ENST00000513734 ESPNB1AK53 854 aa9.38□□□□□ -0.91
HMGN1P17-201ENST00000513734 LZTS3O60299 673 aaPredicted RBP9.38□□□□□ -0.91
HMGN1P17-201ENST00000513734 PDE4CQ08493 712 aa9.38□□□□□ -0.91
HMGN1P17-201ENST00000513734 ARID5BQ14865 1188 aa9.38□□□□□ -0.91
HMGN1P17-201ENST00000513734 TRAF7Q6Q0C0 670 aa9.38□□□□□ -0.91
HMGN1P17-201ENST00000513734 VASH1Q7L8A9 365 aaPredicted RBP9.38□□□□□ -0.91
HMGN1P17-201ENST00000513734 KCTD15Q96SI1 283 aaPredicted RBP9.38□□□□□ -0.91
HMGN1P17-201ENST00000513734 PXDNQ92626 1479 aa9.38□□□□□ -0.91
HMGN1P17-201ENST00000513734 SPATA31A6Q5VVP1 1343 aa9.37□□□□□ -0.91
HMGN1P17-201ENST00000513734 RASA1P20936 1047 aa9.37□□□□□ -0.91
HMGN1P17-201ENST00000513734 TRIM26Q12899 539 aaPredicted RBP9.37□□□□□ -0.91
HMGN1P17-201ENST00000513734 PCDHB11Q9Y5F2 797 aa9.37□□□□□ -0.91
HMGN1P17-201ENST00000513734 KIF1AQ12756 1690 aa9.36□□□□□ -0.91
HMGN1P17-201ENST00000513734 CARNS1A5YM72 827 aa9.36□□□□□ -0.91
HMGN1P17-201ENST00000513734 ATP5J2-PTCD1G3V325 749 aa9.36□□□□□ -0.91
HMGN1P17-201ENST00000513734 XPCQ01831 940 aaPredicted RBP9.36□□□□□ -0.91
HMGN1P17-201ENST00000513734 MEX3CQ5U5Q3 659 aaKnown RBP9.36□□□□□ -0.91
HMGN1P17-201ENST00000513734 LARP1Q6PKG0 1096 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms