RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 ZHX3Q9H4I2 956 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 TMEM134Q9H6X4 195 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 ZNF408Q9H9D4 720 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 FKBPLQ9UIM3 349 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 ANAPC4Q9UJX5 808 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 TRPC6Q9Y210 931 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 BAZ1AQ9NRL2 1556 aaPredicted RBP4.23□□□□□ -1.73
PVT1-202ENST00000512617 ESYT3A0FGR9 886 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 C19orf67A6NJJ6 358 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 CCDC85CA6NKD9 419 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 EPB41L2O43491 1005 aaKnown RBP4.23□□□□□ -1.73
PVT1-202ENST00000512617 TSPAN6O43657 245 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 CTSHP09668 335 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 MZF1P28698 734 aaPredicted RBP4.23□□□□□ -1.73
PVT1-202ENST00000512617 CNGA1P29973 690 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 CNGB1Q14028 1251 aaPredicted RBP4.23□□□□□ -1.73
PVT1-202ENST00000512617 RASA3Q14644 834 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 BRDTQ58F21 947 aaPredicted RBP4.23□□□□□ -1.73
PVT1-202ENST00000512617 L1TD1Q5T7N2 865 aaKnown RBP4.23□□□□□ -1.73
PVT1-202ENST00000512617 TRAF7Q6Q0C0 670 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 LRP10Q7Z4F1 713 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 KIAA0907Q7Z7F0 614 aaPredicted RBP4.23□□□□□ -1.73
PVT1-202ENST00000512617 PGBD3Q8N328 593 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.23□□□□□ -1.73
PVT1-202ENST00000512617 CXorf38Q8TB03 319 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 COL26A1Q96A83 441 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 ALKBH8Q96BT7 664 aaKnown RBP4.23□□□□□ -1.73
PVT1-202ENST00000512617 ARNT2Q9HBZ2 717 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 ARHGEF10LQ9HCE6 1279 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 CASS4Q9NQ75 786 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 AVENQ9NQS1 362 aaPredicted RBP4.23□□□□□ -1.73
PVT1-202ENST00000512617 CCDC87Q9NVE4 849 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 NRBP1Q9UHY1 535 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 PCDHB9Q9Y5E1 797 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 AK5Q9Y6K8 562 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 SMARCA2P51531 1590 aa4.23□□□□□ -1.73
PVT1-202ENST00000512617 FAM221BA6H8Z2 402 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 TTLL13PA6NNM8 815 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 BPNT1O95861 308 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 WEE1P30291 646 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 PDE6BP35913 854 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 EPHB1P54762 984 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 POU5F1Q01860 360 aaKnown RBP4.22□□□□□ -1.73
PVT1-202ENST00000512617 RAPGEF1Q13905 1077 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 EFCAB2Q5VUJ9 269 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 ALKBH2Q6NS38 261 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 CCDC174Q6PII3 467 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 C16orf86Q6ZW13 317 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 PDCD7Q8N8D1 485 aaKnown RBP4.22□□□□□ -1.73
PVT1-202ENST00000512617 TRPM4Q8TD43 1214 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 PHF12Q96QT6 1004 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 FAM129BQ96TA1 746 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 FEZ1Q99689 392 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 KANSL2Q9H9L4 492 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 CNTN3Q9P232 1028 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 CHIC2Q9UKJ5 165 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 DOLKQ9UPQ8 538 aa4.22□□□□□ -1.73
PVT1-202ENST00000512617 R3HCC1Q9Y3T6 440 aaKnown RBP4.22□□□□□ -1.73
PVT1-202ENST00000512617 ALDH1L1O75891 902 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 ATF3P18847 181 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 EIF4BP23588 611 aaKnown RBP4.21□□□□□ -1.74
PVT1-202ENST00000512617 CDC27P30260 824 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 TIE1P35590 1138 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 CDKN1CP49918 316 aaPredicted RBP4.21□□□□□ -1.74
PVT1-202ENST00000512617 EVX2Q03828 476 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 RAB33AQ14088 237 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 HLTFQ14527 1009 aaKnown RBP eCLIP4.21□□□□□ -1.74
PVT1-202ENST00000512617 MAPRE1Q15691 268 aaKnown RBP4.21□□□□□ -1.74
PVT1-202ENST00000512617 NFE2Q16621 373 aaPredicted RBP4.21□□□□□ -1.74
PVT1-202ENST00000512617 OXLD1Q5BKU9 147 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 TMEM92Q6UXU6 159 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 NUDT18Q6ZVK8 323 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 SDR16C5Q8N3Y7 309 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 C1orf131Q8NDD1 294 aaKnown RBP4.21□□□□□ -1.74
PVT1-202ENST00000512617 RASGRP4Q8TDF6 673 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 FBF1Q8TES7 1133 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 SYMPKQ92797 1274 aaKnown RBP4.21□□□□□ -1.74
PVT1-202ENST00000512617 RUNDC1Q96C34 613 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 SLC39A13Q96H72 371 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 SEC16BQ96JE7 1060 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 PURBQ96QR8 312 aaKnown RBP4.21□□□□□ -1.74
PVT1-202ENST00000512617 NIF3L1Q9GZT8 377 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 FAM198AQ9UFP1 575 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 ZRANB1Q9UGI0 708 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 TPX2Q9ULW0 747 aaKnown RBP4.21□□□□□ -1.74
PVT1-202ENST00000512617 SPG7Q9UQ90 795 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 ATP8A1Q9Y2Q0 1164 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 MROH2BQ7Z745 1585 aa4.21□□□□□ -1.74
PVT1-202ENST00000512617 NBPF26B4DH59 902 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 TCERG1O14776 1098 aaKnown RBP4.2□□□□□ -1.74
PVT1-202ENST00000512617 TBX3O15119 743 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 TIMM44O43615 452 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 FZD6O60353 706 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 ZRANB2O95218 330 aaKnown RBP eCLIP4.2□□□□□ -1.74
PVT1-202ENST00000512617 IGHA2P01877 340 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 COL6A1P12109 1028 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 ETFBP38117 255 aa4.2□□□□□ -1.74
PVT1-202ENST00000512617 EIF1AXP47813 144 aaKnown RBP4.2□□□□□ -1.74
PVT1-202ENST00000512617 NASPP49321 788 aaPredicted RBP4.2□□□□□ -1.74
PVT1-202ENST00000512617 IFRD2Q12894 506 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms