RNA–Protein interactions for RNA: ENST00000512394.5

SNX2-211, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-211ENST00000512394 KIF3CO14782 793 aa22.37■■□□□ 1.17
SNX2-211ENST00000512394 CCDC24Q8N4L8 307 aa22.37■■□□□ 1.17
SNX2-211ENST00000512394 CACNA1SQ13698 1873 aa22.37■■□□□ 1.17
SNX2-211ENST00000512394 WDR43Q15061 677 aaKnown RBP eCLIP22.36■■□□□ 1.17
SNX2-211ENST00000512394 NBPF5PQ86XG9 351 aaPredicted RBP22.36■■□□□ 1.17
SNX2-211ENST00000512394 ZNF622Q969S3 477 aaKnown RBP eCLIP22.36■■□□□ 1.17
SNX2-211ENST00000512394 TSPYL4Q9UJ04 414 aa22.36■■□□□ 1.17
SNX2-211ENST00000512394 TIAM2Q8IVF5 1701 aa22.35■■□□□ 1.17
SNX2-211ENST00000512394 TMPOP42166 694 aaKnown RBP22.35■■□□□ 1.17
SNX2-211ENST00000512394 RASSF7Q02833 373 aa22.35■■□□□ 1.17
SNX2-211ENST00000512394 TNRC6CQ9HCJ0 1690 aaKnown RBP22.34■■□□□ 1.17
SNX2-211ENST00000512394 ANP32CO43423 234 aa22.34■■□□□ 1.17
SNX2-211ENST00000512394 NIP7Q9Y221 180 aaKnown RBP eCLIP22.34■■□□□ 1.17
SNX2-211ENST00000512394 NUP98P52948 1817 aa22.34■■□□□ 1.17
SNX2-211ENST00000512394 ZC3H4Q9UPT8 1303 aaKnown RBP22.33■■□□□ 1.17
SNX2-211ENST00000512394 CCDC88AQ3V6T2 1871 aa22.33■■□□□ 1.17
SNX2-211ENST00000512394 BABAM1Q9NWV8 329 aa22.33■■□□□ 1.17
SNX2-211ENST00000512394 KDM2BQ8NHM5 1336 aa22.32■■□□□ 1.16
SNX2-211ENST00000512394 LMNB1P20700 586 aa22.32■■□□□ 1.16
SNX2-211ENST00000512394 STYK1Q6J9G0 422 aa22.32■■□□□ 1.16
SNX2-211ENST00000512394 CCDC146Q8IYE0 955 aa22.32■■□□□ 1.16
SNX2-211ENST00000512394 FER1L6Q2WGJ9 1857 aa22.32■■□□□ 1.16
SNX2-211ENST00000512394 ERBB4Q15303 1308 aa22.31■■□□□ 1.16
SNX2-211ENST00000512394 TPTE2Q6XPS3 522 aa22.31■■□□□ 1.16
SNX2-211ENST00000512394 KIF6Q6ZMV9 814 aa22.31■■□□□ 1.16
SNX2-211ENST00000512394 NGEFQ8N5V2 710 aa22.31■■□□□ 1.16
SNX2-211ENST00000512394 CNKSR1Q969H4 720 aa22.31■■□□□ 1.16
SNX2-211ENST00000512394 NMRK2Q9NPI5 230 aa22.31■■□□□ 1.16
SNX2-211ENST00000512394 ADAMTS8Q9UP79 889 aa22.31■■□□□ 1.16
SNX2-211ENST00000512394 RRP7AQ9Y3A4 280 aaKnown RBP22.31■■□□□ 1.16
SNX2-211ENST00000512394 SLX4Q8IY92 1834 aa22.3■■□□□ 1.16
SNX2-211ENST00000512394 SRGNP10124 158 aa22.3■■□□□ 1.16
SNX2-211ENST00000512394 MYL6BP14649 208 aa22.3■■□□□ 1.16
SNX2-211ENST00000512394 HLFQ16534 295 aa22.3■■□□□ 1.16
SNX2-211ENST00000512394 RUNDC1Q96C34 613 aa22.3■■□□□ 1.16
SNX2-211ENST00000512394 MASTLQ96GX5 879 aa22.3■■□□□ 1.16
SNX2-211ENST00000512394 MAP3K15Q6ZN16 1313 aa22.3■■□□□ 1.16
SNX2-211ENST00000512394 ERVV-1B6SEH8 477 aa22.29■■□□□ 1.16
SNX2-211ENST00000512394 NFKBIEO00221 500 aa22.29■■□□□ 1.16
SNX2-211ENST00000512394 TOMM70O94826 608 aa22.29■■□□□ 1.16
SNX2-211ENST00000512394 C21orf2O43822 256 aa22.28■■□□□ 1.16
SNX2-211ENST00000512394 HSPA6P17066 643 aa22.28■■□□□ 1.16
SNX2-211ENST00000512394 NEUROD2Q15784 382 aa22.28■■□□□ 1.16
SNX2-211ENST00000512394 PRPF40BQ6NWY9 871 aaKnown RBP22.28■■□□□ 1.16
SNX2-211ENST00000512394 ZNF219Q9P2Y4 722 aaPredicted RBP22.28■■□□□ 1.16
SNX2-211ENST00000512394 DICER1Q9UPY3 1922 aaKnown RBP22.27■■□□□ 1.16
SNX2-211ENST00000512394 CEP350Q5VT06 3117 aa22.27■■□□□ 1.16
SNX2-211ENST00000512394 FAM177BA6PVY3 158 aa22.27■■□□□ 1.16
SNX2-211ENST00000512394 GTF2E1P29083 439 aaPredicted RBP22.26■■□□□ 1.15
SNX2-211ENST00000512394 PRELPP51888 382 aa22.26■■□□□ 1.15
SNX2-211ENST00000512394 SOGA3Q5TF21 947 aa22.26■■□□□ 1.15
SNX2-211ENST00000512394 TTLL7Q6ZT98 887 aa22.26■■□□□ 1.15
SNX2-211ENST00000512394 C16orf71Q8IYS4 520 aaPredicted RBP22.26■■□□□ 1.15
SNX2-211ENST00000512394 NYXQ9GZU5 481 aa22.26■■□□□ 1.15
SNX2-211ENST00000512394 NPR1P16066 1061 aa22.25■■□□□ 1.15
SNX2-211ENST00000512394 ZBTB3Q9H5J0 574 aa22.25■■□□□ 1.15
SNX2-211ENST00000512394 IBTKQ9P2D0 1353 aaPredicted RBP22.25■■□□□ 1.15
SNX2-211ENST00000512394 KLRG2A4D1S0 409 aaPredicted RBP22.24■■□□□ 1.15
SNX2-211ENST00000512394 TAOK3Q9H2K8 898 aa22.24■■□□□ 1.15
SNX2-211ENST00000512394 LTBP3Q9NS15 1303 aa22.24■■□□□ 1.15
SNX2-211ENST00000512394 EIF2S2P20042 333 aaKnown RBP22.23■■□□□ 1.15
SNX2-211ENST00000512394 CCDC184Q52MB2 194 aa22.23■■□□□ 1.15
SNX2-211ENST00000512394 TRIM35Q9UPQ4 493 aa22.23■■□□□ 1.15
SNX2-211ENST00000512394 RBM46Q8TBY0 533 aaKnown RBP22.22■■□□□ 1.15
SNX2-211ENST00000512394 RIC1Q4ADV7 1423 aa22.22■■□□□ 1.15
SNX2-211ENST00000512394 ANKRD36CQ5JPF3 1778 aa22.21■■□□□ 1.15
SNX2-211ENST00000512394 GLTPD2A6NH11 291 aa22.21■■□□□ 1.15
SNX2-211ENST00000512394 CHL1O00533 1208 aa22.21■■□□□ 1.15
SNX2-211ENST00000512394 GIGYF2Q6Y7W6 1299 aaKnown RBP22.21■■□□□ 1.15
SNX2-211ENST00000512394 RRAGCQ9HB90 399 aa22.21■■□□□ 1.15
SNX2-211ENST00000512394 LAS1LQ9Y4W2 734 aaKnown RBP22.21■■□□□ 1.15
SNX2-211ENST00000512394 ABCC12Q96J65 1359 aa22.21■■□□□ 1.15
SNX2-211ENST00000512394 GPTP24298 496 aa22.2■■□□□ 1.14
SNX2-211ENST00000512394 PDIA6Q15084 440 aa22.2■■□□□ 1.14
SNX2-211ENST00000512394 LRP10Q7Z4F1 713 aa22.2■■□□□ 1.14
SNX2-211ENST00000512394 MRS2Q9HD23 443 aa22.2■■□□□ 1.14
SNX2-211ENST00000512394 UBN2Q6ZU65 1347 aa22.2■■□□□ 1.14
SNX2-211ENST00000512394 ERFEQ4G0M1 354 aa22.19■■□□□ 1.14
SNX2-211ENST00000512394 CCDC93Q567U6 631 aa22.19■■□□□ 1.14
SNX2-211ENST00000512394 NUTM1Q86Y26 1132 aa22.19■■□□□ 1.14
SNX2-211ENST00000512394 ALDH1B1P30837 517 aa22.18■■□□□ 1.14
SNX2-211ENST00000512394 PROSER3Q2NL68 480 aa22.18■■□□□ 1.14
SNX2-211ENST00000512394 ZNF34Q8IZ26 560 aa22.18■■□□□ 1.14
SNX2-211ENST00000512394 C7orf43Q8WVR3 580 aa22.18■■□□□ 1.14
SNX2-211ENST00000512394 WDR90Q96KV7 1748 aa22.17■■□□□ 1.14
SNX2-211ENST00000512394 CRY2Q49AN0 593 aa22.17■■□□□ 1.14
SNX2-211ENST00000512394 PARP10Q53GL7 1025 aa22.17■■□□□ 1.14
SNX2-211ENST00000512394 DPY19L2Q6NUT2 758 aa22.17■■□□□ 1.14
SNX2-211ENST00000512394 ANXA1P04083 346 aa22.16■■□□□ 1.14
SNX2-211ENST00000512394 APLP1P51693 650 aa22.16■■□□□ 1.14
SNX2-211ENST00000512394 FSTL1Q12841 308 aa22.16■■□□□ 1.14
SNX2-211ENST00000512394 SUSD4Q5VX71 490 aa22.16■■□□□ 1.14
SNX2-211ENST00000512394 PPP1R42Q7Z4L9 355 aa22.16■■□□□ 1.14
SNX2-211ENST00000512394 NECTIN2Q92692 538 aa22.16■■□□□ 1.14
SNX2-211ENST00000512394 NTSR2O95665 410 aa22.15■■□□□ 1.14
SNX2-211ENST00000512394 HOXB7P09629 217 aa22.15■■□□□ 1.14
SNX2-211ENST00000512394 VEGFAP15692 232 aaPredicted RBP22.15■■□□□ 1.14
SNX2-211ENST00000512394 KRT24Q2M2I5 525 aa22.15■■□□□ 1.14
SNX2-211ENST00000512394 NCBP3Q53F19 620 aaKnown RBP22.15■■□□□ 1.14
SNX2-211ENST00000512394 CFAP44Q96MT7 982 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms