RNA–Protein interactions for RNA: ENST00000512345.5

LDB2-214, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 923 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-214ENST00000512345 MMP10P09238 476 aa13.29□□□□□ -0.28
LDB2-214ENST00000512345 TWISTNBQ3B726 338 aaPredicted RBP13.29□□□□□ -0.28
LDB2-214ENST00000512345 LHX8Q68G74 356 aa13.29□□□□□ -0.28
LDB2-214ENST00000512345 ARHGEF1Q92888 912 aaKnown RBP13.29□□□□□ -0.28
LDB2-214ENST00000512345 TSHZ2Q9NRE2 1034 aa13.29□□□□□ -0.28
LDB2-214ENST00000512345 KDM3BQ7LBC6 1761 aa13.29□□□□□ -0.28
LDB2-214ENST00000512345 C19orf67A6NJJ6 358 aa13.28□□□□□ -0.28
LDB2-214ENST00000512345 KCNQ3O43525 872 aa13.28□□□□□ -0.28
LDB2-214ENST00000512345 RARSP54136 660 aaKnown RBP13.28□□□□□ -0.28
LDB2-214ENST00000512345 EIF4A1P60842 406 aaKnown RBP13.28□□□□□ -0.28
LDB2-214ENST00000512345 KRT24Q2M2I5 525 aa13.28□□□□□ -0.28
LDB2-214ENST00000512345 NLGN1Q8N2Q7 840 aa13.28□□□□□ -0.28
LDB2-214ENST00000512345 RNF123Q5XPI4 1314 aa13.28□□□□□ -0.28
LDB2-214ENST00000512345 COL5A3P25940 1745 aaPredicted RBP13.27□□□□□ -0.28
LDB2-214ENST00000512345 RFC4P35249 363 aa13.27□□□□□ -0.29
LDB2-214ENST00000512345 ZNF790Q6PG37 636 aa13.27□□□□□ -0.29
LDB2-214ENST00000512345 SPRYD3Q8NCJ5 442 aa13.27□□□□□ -0.29
LDB2-214ENST00000512345 ZNF428Q96B54 188 aa13.27□□□□□ -0.29
LDB2-214ENST00000512345 BCAR3O75815 825 aa13.26□□□□□ -0.29
LDB2-214ENST00000512345 GYS1P13807 737 aa13.26□□□□□ -0.29
LDB2-214ENST00000512345 CRKLP46109 303 aaKnown RBP13.26□□□□□ -0.29
LDB2-214ENST00000512345 C1QTNF8P60827 252 aa13.26□□□□□ -0.29
LDB2-214ENST00000512345 SOS1Q07889 1333 aaPredicted RBP13.26□□□□□ -0.29
LDB2-214ENST00000512345 SLC39A6Q13433 755 aa13.26□□□□□ -0.29
LDB2-214ENST00000512345 ALDH1L2Q3SY69 923 aa13.26□□□□□ -0.29
LDB2-214ENST00000512345 WWC3Q9ULE0 1092 aa13.26□□□□□ -0.29
LDB2-214ENST00000512345 TTC5Q8N0Z6 440 aa13.25□□□□□ -0.29
LDB2-214ENST00000512345 HEG1Q9ULI3 1381 aa13.24□□□□□ -0.29
LDB2-214ENST00000512345 MYH14Q7Z406 1995 aaKnown RBP13.24□□□□□ -0.29
LDB2-214ENST00000512345 GIGYF1O75420 1035 aaPredicted RBP13.24□□□□□ -0.29
LDB2-214ENST00000512345 GABBR2O75899 941 aa13.24□□□□□ -0.29
LDB2-214ENST00000512345 RRP1P56182 461 aaKnown RBP13.24□□□□□ -0.29
LDB2-214ENST00000512345 TGFB2P61812 414 aa13.24□□□□□ -0.29
LDB2-214ENST00000512345 SSH1Q8WYL5 1049 aa13.24□□□□□ -0.29
LDB2-214ENST00000512345 CCDC87Q9NVE4 849 aa13.24□□□□□ -0.29
LDB2-214ENST00000512345 CICQ96RK0 1608 aaPredicted RBP13.24□□□□□ -0.29
LDB2-214ENST00000512345 C10orf71Q711Q0 1435 aa13.23□□□□□ -0.29
LDB2-214ENST00000512345 HOXB7P09629 217 aa13.23□□□□□ -0.29
LDB2-214ENST00000512345 INTS5Q6P9B9 1019 aaKnown RBP13.23□□□□□ -0.29
LDB2-214ENST00000512345 DNAJC10Q8IXB1 793 aa13.23□□□□□ -0.29
LDB2-214ENST00000512345 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.23□□□□□ -0.29
LDB2-214ENST00000512345 BCL2L13Q9BXK5 485 aa13.23□□□□□ -0.29
LDB2-214ENST00000512345 SMC4Q9NTJ3 1288 aa13.23□□□□□ -0.29
LDB2-214ENST00000512345 SRP68Q9UHB9 627 aaKnown RBP13.23□□□□□ -0.29
LDB2-214ENST00000512345 PARP3Q9Y6F1 533 aa13.23□□□□□ -0.29
LDB2-214ENST00000512345 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
LDB2-214ENST00000512345 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
LDB2-214ENST00000512345 TJP1Q07157 1748 aa13.22□□□□□ -0.29
LDB2-214ENST00000512345 USP42Q9H9J4 1324 aaKnown RBP13.22□□□□□ -0.29
LDB2-214ENST00000512345 NEFLP07196 543 aa13.22□□□□□ -0.29
LDB2-214ENST00000512345 MRPL50Q8N5N7 158 aaKnown RBP13.22□□□□□ -0.29
LDB2-214ENST00000512345 ZNF496Q96IT1 587 aaPredicted RBP13.22□□□□□ -0.29
LDB2-214ENST00000512345 FMNL2Q96PY5 1086 aa13.22□□□□□ -0.29
LDB2-214ENST00000512345 CHMP4AQ9BY43 222 aa13.22□□□□□ -0.29
LDB2-214ENST00000512345 ZBTB47Q9UFB7 747 aaPredicted RBP13.22□□□□□ -0.29
LDB2-214ENST00000512345 A0A0G2JLW4 131 aa13.21□□□□□ -0.29
LDB2-214ENST00000512345 PLIN1O60240 522 aa13.21□□□□□ -0.29
LDB2-214ENST00000512345 CYP19A1P11511 503 aaPredicted RBP13.21□□□□□ -0.29
LDB2-214ENST00000512345 BRPF1P55201 1214 aaPredicted RBP13.21□□□□□ -0.29
LDB2-214ENST00000512345 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.29
LDB2-214ENST00000512345 C4AP0C0L4 1744 aa13.21□□□□□ -0.3
LDB2-214ENST00000512345 ADCY9O60503 1353 aa13.2□□□□□ -0.3
LDB2-214ENST00000512345 KIF13BQ9NQT8 1826 aa13.2□□□□□ -0.3
LDB2-214ENST00000512345 TCERG1O14776 1098 aaKnown RBP13.2□□□□□ -0.3
LDB2-214ENST00000512345 SNRPA1P09661 255 aaKnown RBP13.2□□□□□ -0.3
LDB2-214ENST00000512345 FRAT1Q92837 279 aaPredicted RBP13.2□□□□□ -0.3
LDB2-214ENST00000512345 UBR2Q8IWV8 1755 aa13.2□□□□□ -0.3
LDB2-214ENST00000512345 KCPQ6ZWJ8 1503 aa13.19□□□□□ -0.3
LDB2-214ENST00000512345 PRAMEF22A3QJZ6 481 aa13.19□□□□□ -0.3
LDB2-214ENST00000512345 DPEP1P16444 411 aa13.19□□□□□ -0.3
LDB2-214ENST00000512345 EIF2S2P20042 333 aaKnown RBP13.19□□□□□ -0.3
LDB2-214ENST00000512345 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
LDB2-214ENST00000512345 DDR1Q08345 913 aa13.19□□□□□ -0.3
LDB2-214ENST00000512345 HDGFL1Q5TGJ6 251 aa13.19□□□□□ -0.3
LDB2-214ENST00000512345 STK31Q9BXU1 1019 aa13.19□□□□□ -0.3
LDB2-214ENST00000512345 NOB1Q9ULX3 412 aaKnown RBP13.19□□□□□ -0.3
LDB2-214ENST00000512345 CLEC11AQ9Y240 323 aa13.19□□□□□ -0.3
LDB2-214ENST00000512345 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
LDB2-214ENST00000512345 KIAA1551Q9HCM1 1747 aa13.19□□□□□ -0.3
LDB2-214ENST00000512345 KIF16BQ96L93 1317 aa13.18□□□□□ -0.3
LDB2-214ENST00000512345 IPO8O15397 1037 aaKnown RBP13.18□□□□□ -0.3
LDB2-214ENST00000512345 ZPR1O75312 459 aa13.18□□□□□ -0.3
LDB2-214ENST00000512345 IRX6P78412 446 aaPredicted RBP13.18□□□□□ -0.3
LDB2-214ENST00000512345 ZKSCAN2Q63HK3 967 aa13.18□□□□□ -0.3
LDB2-214ENST00000512345 NECTIN2Q92692 538 aa13.18□□□□□ -0.3
LDB2-214ENST00000512345 GPBP1L1Q9HC44 474 aaPredicted RBP13.18□□□□□ -0.3
LDB2-214ENST00000512345 GTF3C3Q9Y5Q9 886 aa13.18□□□□□ -0.3
LDB2-214ENST00000512345 TM4SF1P30408 202 aa13.17□□□□□ -0.3
LDB2-214ENST00000512345 USPL1Q5W0Q7 1092 aa13.17□□□□□ -0.3
LDB2-214ENST00000512345 ZNF526Q8TF50 670 aaPredicted RBP13.17□□□□□ -0.3
LDB2-214ENST00000512345 ZBTB1Q9Y2K1 713 aa13.17□□□□□ -0.3
LDB2-214ENST00000512345 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
LDB2-214ENST00000512345 CACNA1FO60840 1977 aa13.17□□□□□ -0.3
LDB2-214ENST00000512345 N4BP2Q86UW6 1770 aaPredicted RBP13.17□□□□□ -0.3
LDB2-214ENST00000512345 POLRMTO00411 1230 aaKnown RBP13.16□□□□□ -0.3
LDB2-214ENST00000512345 KCNA3P22001 575 aa13.16□□□□□ -0.3
LDB2-214ENST00000512345 SPDYE1Q8NFV5 336 aaPredicted RBP13.16□□□□□ -0.3
LDB2-214ENST00000512345 ARHGAP45Q92619 1136 aa13.16□□□□□ -0.3
LDB2-214ENST00000512345 NARFQ9UHQ1 456 aa13.16□□□□□ -0.3
LDB2-214ENST00000512345 COL15A1P39059 1388 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms