RNA–Protein interactions for RNA: ENST00000512028.5

SPDL1-211, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 4

Gene SPDL1, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-211ENST00000512028 CLCN1P35523 988 aa11.94□□□□□ -0.5
SPDL1-211ENST00000512028 GPCPD1Q9NPB8 672 aa11.94□□□□□ -0.5
SPDL1-211ENST00000512028 KDM4AO75164 1064 aa11.93□□□□□ -0.5
SPDL1-211ENST00000512028 DDB1Q16531 1140 aa11.93□□□□□ -0.5
SPDL1-211ENST00000512028 PLA2G2CQ5R387 149 aa11.93□□□□□ -0.5
SPDL1-211ENST00000512028 TRIM67Q6ZTA4 783 aa11.93□□□□□ -0.5
SPDL1-211ENST00000512028 FAM160A2Q8N612 972 aaPredicted RBP11.93□□□□□ -0.5
SPDL1-211ENST00000512028 CPDO75976 1380 aa11.92□□□□□ -0.5
SPDL1-211ENST00000512028 COL5A2P05997 1499 aaPredicted RBP11.92□□□□□ -0.5
SPDL1-211ENST00000512028 LCE2BO14633 110 aa11.92□□□□□ -0.5
SPDL1-211ENST00000512028 USP46P62068 366 aa11.92□□□□□ -0.5
SPDL1-211ENST00000512028 PRR20EP86478 221 aa11.92□□□□□ -0.5
SPDL1-211ENST00000512028 PRR20CP86479 221 aa11.92□□□□□ -0.5
SPDL1-211ENST00000512028 PRR20DP86480 221 aa11.92□□□□□ -0.5
SPDL1-211ENST00000512028 PRR20BP86481 221 aa11.92□□□□□ -0.5
SPDL1-211ENST00000512028 PRR20AP86496 221 aa11.92□□□□□ -0.5
SPDL1-211ENST00000512028 Q3C1V9 767 aa11.92□□□□□ -0.5
SPDL1-211ENST00000512028 MSS51Q4VC12 460 aa11.92□□□□□ -0.5
SPDL1-211ENST00000512028 ZNF697Q5TEC3 545 aa11.92□□□□□ -0.5
SPDL1-211ENST00000512028 TRAK1Q9UPV9 953 aa11.92□□□□□ -0.5
SPDL1-211ENST00000512028 CRB1P82279 1406 aa11.92□□□□□ -0.5
SPDL1-211ENST00000512028 WNK3Q9BYP7 1800 aa11.91□□□□□ -0.5
SPDL1-211ENST00000512028 KAT6BQ8WYB5 2073 aa11.9□□□□□ -0.5
SPDL1-211ENST00000512028 HSPA6P17066 643 aa11.9□□□□□ -0.5
SPDL1-211ENST00000512028 PPARGC1BQ86YN6 1023 aaKnown RBP11.9□□□□□ -0.5
SPDL1-211ENST00000512028 KRI1Q8N9T8 703 aaKnown RBP11.9□□□□□ -0.5
SPDL1-211ENST00000512028 MARCH10Q8NA82 808 aaPredicted RBP11.9□□□□□ -0.5
SPDL1-211ENST00000512028 FAM217BQ9NTX9 383 aaPredicted RBP11.9□□□□□ -0.5
SPDL1-211ENST00000512028 BCL9O00512 1426 aa11.89□□□□□ -0.51
SPDL1-211ENST00000512028 RPIAP49247 311 aa11.89□□□□□ -0.51
SPDL1-211ENST00000512028 RNF19BQ6ZMZ0 732 aa11.89□□□□□ -0.51
SPDL1-211ENST00000512028 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
SPDL1-211ENST00000512028 NUDT16Q96DE0 195 aaKnown RBP11.89□□□□□ -0.51
SPDL1-211ENST00000512028 ADGRB1O14514 1584 aa11.88□□□□□ -0.51
SPDL1-211ENST00000512028 ZMYND10O75800 440 aa11.88□□□□□ -0.51
SPDL1-211ENST00000512028 FCF1Q9Y324 198 aaKnown RBP11.88□□□□□ -0.51
SPDL1-211ENST00000512028 AATKQ6ZMQ8 1374 aa11.88□□□□□ -0.51
SPDL1-211ENST00000512028 USP19O94966 1318 aa11.87□□□□□ -0.51
SPDL1-211ENST00000512028 GDF9O60383 454 aa11.87□□□□□ -0.51
SPDL1-211ENST00000512028 GCP02774 474 aa11.87□□□□□ -0.51
SPDL1-211ENST00000512028 TOPAZ1Q8N9V7 1692 aa11.87□□□□□ -0.51
SPDL1-211ENST00000512028 ACEP12821 1306 aa11.86□□□□□ -0.51
SPDL1-211ENST00000512028 PAPPAQ13219 1627 aa11.86□□□□□ -0.51
SPDL1-211ENST00000512028 ZBTB7CA1YPR0 619 aa11.86□□□□□ -0.51
SPDL1-211ENST00000512028 TOM1L2Q6ZVM7 507 aa11.86□□□□□ -0.51
SPDL1-211ENST00000512028 ZC3H15Q8WU90 426 aaKnown RBP11.86□□□□□ -0.51
SPDL1-211ENST00000512028 PRDM9Q9NQV7 894 aa11.86□□□□□ -0.51
SPDL1-211ENST00000512028 POLR3AO14802 1390 aaPredicted RBP11.86□□□□□ -0.51
SPDL1-211ENST00000512028 COL24A1Q17RW2 1714 aa11.86□□□□□ -0.51
SPDL1-211ENST00000512028 ATP10DQ9P241 1426 aa11.86□□□□□ -0.51
SPDL1-211ENST00000512028 HOXA2O43364 376 aa11.85□□□□□ -0.51
SPDL1-211ENST00000512028 NLRP13Q86W25 1043 aa11.85□□□□□ -0.51
SPDL1-211ENST00000512028 NLGN2Q8NFZ4 835 aa11.85□□□□□ -0.51
SPDL1-211ENST00000512028 GPBP1L1Q9HC44 474 aaPredicted RBP11.85□□□□□ -0.51
SPDL1-211ENST00000512028 GRIN3BO60391 1043 aa11.84□□□□□ -0.51
SPDL1-211ENST00000512028 YBX3P16989 372 aaKnown RBP eCLIP11.84□□□□□ -0.51
SPDL1-211ENST00000512028 POLD1P28340 1107 aa11.84□□□□□ -0.51
SPDL1-211ENST00000512028 MPHOSPH9Q99550 1183 aa11.84□□□□□ -0.51
SPDL1-211ENST00000512028 CDCA7Q9BWT1 371 aaPredicted RBP11.84□□□□□ -0.51
SPDL1-211ENST00000512028 RGPD5Q99666 1765 aa11.84□□□□□ -0.51
SPDL1-211ENST00000512028 PCNTO95613 3336 aa11.84□□□□□ -0.51
SPDL1-211ENST00000512028 COL18A1P39060 1754 aa11.83□□□□□ -0.52
SPDL1-211ENST00000512028 DGAT1O75907 488 aa11.83□□□□□ -0.52
SPDL1-211ENST00000512028 CD2BP2O95400 341 aaKnown RBP11.83□□□□□ -0.52
SPDL1-211ENST00000512028 MMP16P51512 607 aa11.83□□□□□ -0.52
SPDL1-211ENST00000512028 ZNF827Q17R98 1081 aa11.83□□□□□ -0.52
SPDL1-211ENST00000512028 USB1Q9BQ65 265 aaKnown RBP11.83□□□□□ -0.52
SPDL1-211ENST00000512028 NHSQ6T4R5 1651 aa11.83□□□□□ -0.52
SPDL1-211ENST00000512028 QSER1Q2KHR3 1735 aa11.83□□□□□ -0.52
SPDL1-211ENST00000512028 NUTM1Q86Y26 1132 aa11.82□□□□□ -0.52
SPDL1-211ENST00000512028 CDK19Q9BWU1 502 aa11.82□□□□□ -0.52
SPDL1-211ENST00000512028 ARHGEF28Q8N1W1 1705 aaKnown RBP11.82□□□□□ -0.52
SPDL1-211ENST00000512028 BTAF1O14981 1849 aa11.81□□□□□ -0.52
SPDL1-211ENST00000512028 PLEKHG3A1L390 1219 aa11.81□□□□□ -0.52
SPDL1-211ENST00000512028 EXOC5O00471 708 aa11.81□□□□□ -0.52
SPDL1-211ENST00000512028 PKDCCQ504Y2 493 aa11.81□□□□□ -0.52
SPDL1-211ENST00000512028 ZNF526Q8TF50 670 aaPredicted RBP11.81□□□□□ -0.52
SPDL1-211ENST00000512028 SLC16A10Q8TF71 515 aa11.81□□□□□ -0.52
SPDL1-211ENST00000512028 REPIN1Q9BWE0 567 aaKnown RBP11.81□□□□□ -0.52
SPDL1-211ENST00000512028 WDR17Q8IZU2 1322 aa11.81□□□□□ -0.52
SPDL1-211ENST00000512028 TNFRSF10AO00220 468 aa11.8□□□□□ -0.52
SPDL1-211ENST00000512028 ZBTB24O43167 697 aaPredicted RBP11.8□□□□□ -0.52
SPDL1-211ENST00000512028 AMHR2Q16671 573 aa11.8□□□□□ -0.52
SPDL1-211ENST00000512028 HLA-CQ95604 372 aa11.8□□□□□ -0.52
SPDL1-211ENST00000512028 ACSBG1Q96GR2 724 aa11.8□□□□□ -0.52
SPDL1-211ENST00000512028 TUBGCP6Q96RT7 1819 aa11.8□□□□□ -0.52
SPDL1-211ENST00000512028 SSTR3P32745 418 aaPredicted RBP11.79□□□□□ -0.52
SPDL1-211ENST00000512028 LRRC4BQ9NT99 713 aa11.79□□□□□ -0.52
SPDL1-211ENST00000512028 PKD2L1Q9P0L9 805 aa11.79□□□□□ -0.52
SPDL1-211ENST00000512028 DXOO77932 396 aaKnown RBP11.78□□□□□ -0.52
SPDL1-211ENST00000512028 SLIT3O75094 1523 aa11.77□□□□□ -0.52
SPDL1-211ENST00000512028 TTLL12Q14166 644 aaPredicted RBP11.77□□□□□ -0.53
SPDL1-211ENST00000512028 CARD10Q9BWT7 1032 aa11.77□□□□□ -0.53
SPDL1-211ENST00000512028 PNPLA7Q6ZV29 1317 aa11.77□□□□□ -0.53
SPDL1-211ENST00000512028 ADCY9O60503 1353 aa11.77□□□□□ -0.53
SPDL1-211ENST00000512028 USP6P35125 1406 aa11.77□□□□□ -0.53
SPDL1-211ENST00000512028 CSB-PGBD3P0DP91 1061 aa11.76□□□□□ -0.53
SPDL1-211ENST00000512028 FOXC1Q12948 553 aa11.76□□□□□ -0.53
SPDL1-211ENST00000512028 DNAJC5GQ8N7S2 189 aa11.76□□□□□ -0.53
SPDL1-211ENST00000512028 BRD4O60885 1362 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms