RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 WDR63Q8IWG1 891 aa16.18■□□□□ 0.18
PTCD2-209ENST00000511752 SETDB2Q96T68 719 aa16.18■□□□□ 0.18
PTCD2-209ENST00000511752 N4BP2Q86UW6 1770 aaPredicted RBP16.18■□□□□ 0.18
PTCD2-209ENST00000511752 KIAA1551Q9HCM1 1747 aa16.17■□□□□ 0.18
PTCD2-209ENST00000511752 ERVV-1B6SEH8 477 aa16.17■□□□□ 0.18
PTCD2-209ENST00000511752 DDX21Q9NR30 783 aaKnown RBP eCLIP16.17■□□□□ 0.18
PTCD2-209ENST00000511752 NUP98P52948 1817 aa16.17■□□□□ 0.18
PTCD2-209ENST00000511752 MAP3K15Q6ZN16 1313 aa16.17■□□□□ 0.18
PTCD2-209ENST00000511752 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
PTCD2-209ENST00000511752 NPHP1O15259 732 aa16.16■□□□□ 0.18
PTCD2-209ENST00000511752 CHMP4AQ9BY43 222 aa16.16■□□□□ 0.18
PTCD2-209ENST00000511752 TTLL7Q6ZT98 887 aa16.15■□□□□ 0.18
PTCD2-209ENST00000511752 TSR2Q969E8 191 aaKnown RBP16.15■□□□□ 0.18
PTCD2-209ENST00000511752 DBF4Q9UBU7 674 aaPredicted RBP16.15■□□□□ 0.18
PTCD2-209ENST00000511752 NIP7Q9Y221 180 aaKnown RBP eCLIP16.15■□□□□ 0.18
PTCD2-209ENST00000511752 A0A0G2JLW4 131 aa16.14■□□□□ 0.17
PTCD2-209ENST00000511752 ELL2O00472 640 aaPredicted RBP16.14■□□□□ 0.17
PTCD2-209ENST00000511752 ANXA1P04083 346 aa16.14■□□□□ 0.17
PTCD2-209ENST00000511752 DPEP1P16444 411 aa16.14■□□□□ 0.17
PTCD2-209ENST00000511752 HLFQ16534 295 aa16.14■□□□□ 0.17
PTCD2-209ENST00000511752 PROSER3Q2NL68 480 aa16.14■□□□□ 0.17
PTCD2-209ENST00000511752 LRP10Q7Z4F1 713 aa16.14■□□□□ 0.17
PTCD2-209ENST00000511752 CNBD1Q8NA66 436 aa16.14■□□□□ 0.17
PTCD2-209ENST00000511752 C8orf58Q8NAV2 365 aa16.14■□□□□ 0.17
PTCD2-209ENST00000511752 ZBTB3Q9H5J0 574 aa16.14■□□□□ 0.17
PTCD2-209ENST00000511752 CHPF2Q9P2E5 772 aa16.14■□□□□ 0.17
PTCD2-209ENST00000511752 GRIN3BO60391 1043 aa16.13■□□□□ 0.17
PTCD2-209ENST00000511752 YBX3P16989 372 aaKnown RBP eCLIP16.13■□□□□ 0.17
PTCD2-209ENST00000511752 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
PTCD2-209ENST00000511752 GIGYF2Q6Y7W6 1299 aaKnown RBP16.13■□□□□ 0.17
PTCD2-209ENST00000511752 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
PTCD2-209ENST00000511752 XAGE3Q8WTP9 111 aa16.13■□□□□ 0.17
PTCD2-209ENST00000511752 BRCA1P38398 1863 aaKnown RBP16.12■□□□□ 0.17
PTCD2-209ENST00000511752 ST5P78524 1137 aa16.12■□□□□ 0.17
PTCD2-209ENST00000511752 PRR5LQ6MZQ0 368 aa16.12■□□□□ 0.17
PTCD2-209ENST00000511752 PPP4R3CPQ6ZMV5 832 aa16.12■□□□□ 0.17
PTCD2-209ENST00000511752 COPS6Q7L5N1 327 aa16.12■□□□□ 0.17
PTCD2-209ENST00000511752 MIER1Q8N108 512 aa16.12■□□□□ 0.17
PTCD2-209ENST00000511752 MYH16Q9H6N6 1097 aa16.12■□□□□ 0.17
PTCD2-209ENST00000511752 HYPKQ9NX55 129 aa16.12■□□□□ 0.17
PTCD2-209ENST00000511752 WWC3Q9ULE0 1092 aa16.12■□□□□ 0.17
PTCD2-209ENST00000511752 CHD4Q14839 1912 aa16.11■□□□□ 0.17
PTCD2-209ENST00000511752 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
PTCD2-209ENST00000511752 CCDC30Q5VVM6 783 aa16.11■□□□□ 0.17
PTCD2-209ENST00000511752 TPTE2Q6XPS3 522 aa16.11■□□□□ 0.17
PTCD2-209ENST00000511752 PIM2Q9P1W9 311 aa16.11■□□□□ 0.17
PTCD2-209ENST00000511752 PDZRN3Q9UPQ7 1066 aa16.11■□□□□ 0.17
PTCD2-209ENST00000511752 ANKRD31Q8N7Z5 1873 aa16.11■□□□□ 0.17
PTCD2-209ENST00000511752 FANCIQ9NVI1 1328 aa16.11■□□□□ 0.17
PTCD2-209ENST00000511752 ANKRD36CQ5JPF3 1778 aa16.1■□□□□ 0.17
PTCD2-209ENST00000511752 DLEC1Q9Y238 1755 aa16.1■□□□□ 0.17
PTCD2-209ENST00000511752 CHRNA5P30532 468 aa16.1■□□□□ 0.17
PTCD2-209ENST00000511752 PDE6BP35913 854 aa16.1■□□□□ 0.17
PTCD2-209ENST00000511752 GOLGA2Q08379 1002 aa16.1■□□□□ 0.17
PTCD2-209ENST00000511752 TWISTNBQ3B726 338 aaPredicted RBP16.1■□□□□ 0.17
PTCD2-209ENST00000511752 TSPYL6Q8N831 410 aa16.1■□□□□ 0.17
PTCD2-209ENST00000511752 BRIP1Q9BX63 1249 aa16.1■□□□□ 0.17
PTCD2-209ENST00000511752 BCS1LQ9Y276 419 aa16.1■□□□□ 0.17
PTCD2-209ENST00000511752 FAM177BA6PVY3 158 aa16.09■□□□□ 0.17
PTCD2-209ENST00000511752 H0YIN7 160 aa16.09■□□□□ 0.17
PTCD2-209ENST00000511752 KCNA3P22001 575 aa16.09■□□□□ 0.17
PTCD2-209ENST00000511752 GTF2E1P29083 439 aaPredicted RBP16.09■□□□□ 0.17
PTCD2-209ENST00000511752 HSP90AB3PQ58FF7 597 aa16.09■□□□□ 0.17
PTCD2-209ENST00000511752 C2CD5Q86YS7 1000 aa16.09■□□□□ 0.17
PTCD2-209ENST00000511752 NYXQ9GZU5 481 aa16.09■□□□□ 0.17
PTCD2-209ENST00000511752 ARFGEF1Q9Y6D6 1849 aa16.08■□□□□ 0.17
PTCD2-209ENST00000511752 GPTP24298 496 aa16.08■□□□□ 0.16
PTCD2-209ENST00000511752 PARP10Q53GL7 1025 aa16.08■□□□□ 0.16
PTCD2-209ENST00000511752 ZNF34Q8IZ26 560 aa16.08■□□□□ 0.16
PTCD2-209ENST00000511752 CCDC24Q8N4L8 307 aa16.08■□□□□ 0.16
PTCD2-209ENST00000511752 PLBD2Q8NHP8 589 aa16.08■□□□□ 0.16
PTCD2-209ENST00000511752 STK31Q9BXU1 1019 aa16.08■□□□□ 0.16
PTCD2-209ENST00000511752 YY1P25490 414 aa16.07■□□□□ 0.16
PTCD2-209ENST00000511752 DALRD3Q5D0E6 543 aaKnown RBP16.07■□□□□ 0.16
PTCD2-209ENST00000511752 ANKRD13DQ6ZTN6 518 aa16.07■□□□□ 0.16
PTCD2-209ENST00000511752 PPP1R42Q7Z4L9 355 aa16.07■□□□□ 0.16
PTCD2-209ENST00000511752 ZNF521Q96K83 1311 aa16.07■□□□□ 0.16
PTCD2-209ENST00000511752 IBTKQ9P2D0 1353 aaPredicted RBP16.07■□□□□ 0.16
PTCD2-209ENST00000511752 UBN2Q6ZU65 1347 aa16.06■□□□□ 0.16
PTCD2-209ENST00000511752 EXOSC9Q06265 439 aaKnown RBP16.06■□□□□ 0.16
PTCD2-209ENST00000511752 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
PTCD2-209ENST00000511752 ARFGEF2Q9Y6D5 1785 aa16.05■□□□□ 0.16
PTCD2-209ENST00000511752 COL11A2P13942 1736 aaPredicted RBP16.05■□□□□ 0.16
PTCD2-209ENST00000511752 TCIRG1Q13488 830 aa16.05■□□□□ 0.16
PTCD2-209ENST00000511752 SUSD4Q5VX71 490 aa16.05■□□□□ 0.16
PTCD2-209ENST00000511752 PHAXQ9H814 394 aaKnown RBP16.05■□□□□ 0.16
PTCD2-209ENST00000511752 CACNA1FO60840 1977 aa16.04■□□□□ 0.16
PTCD2-209ENST00000511752 DDX58O95786 925 aaKnown RBP16.04■□□□□ 0.16
PTCD2-209ENST00000511752 RIC3Q7Z5B4 369 aa16.04■□□□□ 0.16
PTCD2-209ENST00000511752 TTLL6Q8N841 843 aa16.04■□□□□ 0.16
PTCD2-209ENST00000511752 ZNF622Q969S3 477 aaKnown RBP eCLIP16.04■□□□□ 0.16
PTCD2-209ENST00000511752 RNF123Q5XPI4 1314 aa16.03■□□□□ 0.16
PTCD2-209ENST00000511752 E9PSI1 815 aa16.03■□□□□ 0.16
PTCD2-209ENST00000511752 VAMP4O75379 141 aa16.03■□□□□ 0.16
PTCD2-209ENST00000511752 NTSR2O95665 410 aa16.03■□□□□ 0.16
PTCD2-209ENST00000511752 ERFEQ4G0M1 354 aa16.03■□□□□ 0.16
PTCD2-209ENST00000511752 NUTM1Q86Y26 1132 aa16.03■□□□□ 0.16
PTCD2-209ENST00000511752 UTP14AQ9BVJ6 771 aaKnown RBP16.03■□□□□ 0.16
PTCD2-209ENST00000511752 CACNA1SQ13698 1873 aa16.02■□□□□ 0.16
PTCD2-209ENST00000511752 TCERG1O14776 1098 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms