RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 WDR43Q15061 677 aaKnown RBP eCLIP15.85■□□□□ 0.13
CHFR-208ENST00000511001 BRIP1Q9BX63 1249 aa15.85■□□□□ 0.13
CHFR-208ENST00000511001 TSPYL4Q9UJ04 414 aa15.85■□□□□ 0.13
CHFR-208ENST00000511001 TRIM35Q9UPQ4 493 aa15.85■□□□□ 0.13
CHFR-208ENST00000511001 FER1L6Q2WGJ9 1857 aa15.84■□□□□ 0.13
CHFR-208ENST00000511001 RGL2O15211 777 aa15.84■□□□□ 0.13
CHFR-208ENST00000511001 NEUROD2Q15784 382 aa15.84■□□□□ 0.13
CHFR-208ENST00000511001 HLFQ16534 295 aa15.84■□□□□ 0.13
CHFR-208ENST00000511001 BABAM1Q9NWV8 329 aa15.84■□□□□ 0.13
CHFR-208ENST00000511001 H0YIN7 160 aa15.83■□□□□ 0.12
CHFR-208ENST00000511001 TTLL6Q8N841 843 aa15.83■□□□□ 0.12
CHFR-208ENST00000511001 CNBD1Q8NA66 436 aa15.83■□□□□ 0.12
CHFR-208ENST00000511001 ZNF652Q9Y2D9 606 aa15.83■□□□□ 0.12
CHFR-208ENST00000511001 DICER1Q9UPY3 1922 aaKnown RBP15.82■□□□□ 0.12
CHFR-208ENST00000511001 PDE6BP35913 854 aa15.82■□□□□ 0.12
CHFR-208ENST00000511001 C9orf131Q5VYM1 1079 aa15.82■□□□□ 0.12
CHFR-208ENST00000511001 TTLL7Q6ZT98 887 aa15.82■□□□□ 0.12
CHFR-208ENST00000511001 LRP10Q7Z4F1 713 aa15.82■□□□□ 0.12
CHFR-208ENST00000511001 NGEFQ8N5V2 710 aa15.82■□□□□ 0.12
CHFR-208ENST00000511001 PDZRN3Q9UPQ7 1066 aa15.82■□□□□ 0.12
CHFR-208ENST00000511001 KIF3CO14782 793 aa15.81■□□□□ 0.12
CHFR-208ENST00000511001 ERBB4Q15303 1308 aa15.81■□□□□ 0.12
CHFR-208ENST00000511001 NIP7Q9Y221 180 aaKnown RBP eCLIP15.81■□□□□ 0.12
CHFR-208ENST00000511001 TNRC6CQ9HCJ0 1690 aaKnown RBP15.8■□□□□ 0.12
CHFR-208ENST00000511001 MAP3K15Q6ZN16 1313 aa15.8■□□□□ 0.12
CHFR-208ENST00000511001 ERVV-1B6SEH8 477 aa15.8■□□□□ 0.12
CHFR-208ENST00000511001 CHL1O00533 1208 aa15.8■□□□□ 0.12
CHFR-208ENST00000511001 MYL6BP14649 208 aa15.8■□□□□ 0.12
CHFR-208ENST00000511001 PRELPP51888 382 aa15.8■□□□□ 0.12
CHFR-208ENST00000511001 ST5P78524 1137 aa15.8■□□□□ 0.12
CHFR-208ENST00000511001 RASSF7Q02833 373 aa15.8■□□□□ 0.12
CHFR-208ENST00000511001 PDIA6Q15084 440 aa15.8■□□□□ 0.12
CHFR-208ENST00000511001 CCDC184Q52MB2 194 aa15.8■□□□□ 0.12
CHFR-208ENST00000511001 NBPF5PQ86XG9 351 aaPredicted RBP15.8■□□□□ 0.12
CHFR-208ENST00000511001 ANKRD36CQ5JPF3 1778 aa15.8■□□□□ 0.12
CHFR-208ENST00000511001 WDR90Q96KV7 1748 aa15.8■□□□□ 0.12
CHFR-208ENST00000511001 SRGNP10124 158 aa15.79■□□□□ 0.12
CHFR-208ENST00000511001 KRT24Q2M2I5 525 aa15.79■□□□□ 0.12
CHFR-208ENST00000511001 ZNF622Q969S3 477 aaKnown RBP eCLIP15.79■□□□□ 0.12
CHFR-208ENST00000511001 TIAM2Q8IVF5 1701 aa15.79■□□□□ 0.12
CHFR-208ENST00000511001 KLRG2A4D1S0 409 aaPredicted RBP15.78■□□□□ 0.12
CHFR-208ENST00000511001 NFKBIEO00221 500 aa15.78■□□□□ 0.12
CHFR-208ENST00000511001 EIF2S2P20042 333 aaKnown RBP15.78■□□□□ 0.12
CHFR-208ENST00000511001 PROSER3Q2NL68 480 aa15.78■□□□□ 0.12
CHFR-208ENST00000511001 RNF181Q9P0P0 153 aa15.78■□□□□ 0.12
CHFR-208ENST00000511001 ZNF316A6NFI3 1004 aaPredicted RBP15.77■□□□□ 0.12
CHFR-208ENST00000511001 FAM177BA6PVY3 158 aa15.77■□□□□ 0.12
CHFR-208ENST00000511001 APAF1O14727 1248 aa15.77■□□□□ 0.12
CHFR-208ENST00000511001 NPHP1O15259 732 aa15.77■□□□□ 0.12
CHFR-208ENST00000511001 ANXA1P04083 346 aa15.77■□□□□ 0.12
CHFR-208ENST00000511001 STYK1Q6J9G0 422 aa15.77■□□□□ 0.12
CHFR-208ENST00000511001 UBN2Q6ZU65 1347 aa15.76■□□□□ 0.11
CHFR-208ENST00000511001 TPTE2Q6XPS3 522 aa15.76■□□□□ 0.11
CHFR-208ENST00000511001 KIF6Q6ZMV9 814 aa15.76■□□□□ 0.11
CHFR-208ENST00000511001 MASTLQ96GX5 879 aa15.76■□□□□ 0.11
CHFR-208ENST00000511001 ZBTB3Q9H5J0 574 aa15.76■□□□□ 0.11
CHFR-208ENST00000511001 ABCC12Q96J65 1359 aa15.75■□□□□ 0.11
CHFR-208ENST00000511001 C21orf2O43822 256 aa15.75■□□□□ 0.11
CHFR-208ENST00000511001 GIGYF2Q6Y7W6 1299 aaKnown RBP15.75■□□□□ 0.11
CHFR-208ENST00000511001 ZNF34Q8IZ26 560 aa15.75■□□□□ 0.11
CHFR-208ENST00000511001 NECTIN2Q92692 538 aa15.75■□□□□ 0.11
CHFR-208ENST00000511001 CNKSR1Q969H4 720 aa15.75■□□□□ 0.11
CHFR-208ENST00000511001 NMRK2Q9NPI5 230 aa15.75■□□□□ 0.11
CHFR-208ENST00000511001 LAS1LQ9Y4W2 734 aaKnown RBP15.75■□□□□ 0.11
CHFR-208ENST00000511001 ZNF853P0CG23 659 aa15.74■□□□□ 0.11
CHFR-208ENST00000511001 LMNB1P20700 586 aa15.74■□□□□ 0.11
CHFR-208ENST00000511001 GPTP24298 496 aa15.74■□□□□ 0.11
CHFR-208ENST00000511001 APLP1P51693 650 aa15.74■□□□□ 0.11
CHFR-208ENST00000511001 PRPF40BQ6NWY9 871 aaKnown RBP15.74■□□□□ 0.11
CHFR-208ENST00000511001 CFAP44Q96MT7 982 aa15.74■□□□□ 0.11
CHFR-208ENST00000511001 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
CHFR-208ENST00000511001 IBTKQ9P2D0 1353 aaPredicted RBP15.74■□□□□ 0.11
CHFR-208ENST00000511001 LAMB2P55268 1798 aa15.73■□□□□ 0.11
CHFR-208ENST00000511001 NPR1P16066 1061 aa15.73■□□□□ 0.11
CHFR-208ENST00000511001 SUSD4Q5VX71 490 aa15.73■□□□□ 0.11
CHFR-208ENST00000511001 NUTM1Q86Y26 1132 aa15.73■□□□□ 0.11
CHFR-208ENST00000511001 C7orf43Q8WVR3 580 aa15.73■□□□□ 0.11
CHFR-208ENST00000511001 MBIPQ9NS73 344 aa15.73■□□□□ 0.11
CHFR-208ENST00000511001 RIC1Q4ADV7 1423 aa15.73■□□□□ 0.11
CHFR-208ENST00000511001 NTSR2O95665 410 aa15.72■□□□□ 0.11
CHFR-208ENST00000511001 ERFEQ4G0M1 354 aa15.72■□□□□ 0.11
CHFR-208ENST00000511001 COPS6Q7L5N1 327 aa15.72■□□□□ 0.11
CHFR-208ENST00000511001 NYXQ9GZU5 481 aa15.72■□□□□ 0.11
CHFR-208ENST00000511001 DDX21Q9NR30 783 aaKnown RBP eCLIP15.72■□□□□ 0.11
CHFR-208ENST00000511001 LTBP3Q9NS15 1303 aa15.71■□□□□ 0.11
CHFR-208ENST00000511001 ZC3H4Q9UPT8 1303 aaKnown RBP15.71■□□□□ 0.11
CHFR-208ENST00000511001 HOXB7P09629 217 aa15.71■□□□□ 0.11
CHFR-208ENST00000511001 XAGE3Q8WTP9 111 aa15.71■□□□□ 0.11
CHFR-208ENST00000511001 TOMM70O94826 608 aa15.7■□□□□ 0.1
CHFR-208ENST00000511001 GTF2E1P29083 439 aaPredicted RBP15.7■□□□□ 0.1
CHFR-208ENST00000511001 CRY2Q49AN0 593 aa15.7■□□□□ 0.1
CHFR-208ENST00000511001 CHPF2Q9P2E5 772 aa15.7■□□□□ 0.1
CHFR-208ENST00000511001 AIMP1Q12904 312 aaKnown RBP15.69■□□□□ 0.1
CHFR-208ENST00000511001 HDGFL1Q5TGJ6 251 aa15.69■□□□□ 0.1
CHFR-208ENST00000511001 DUSP27Q5VZP5 1158 aa15.69■□□□□ 0.1
CHFR-208ENST00000511001 DNAJC5GQ8N7S2 189 aa15.69■□□□□ 0.1
CHFR-208ENST00000511001 IFT57Q9NWB7 429 aa15.69■□□□□ 0.1
CHFR-208ENST00000511001 KDM2BQ8NHM5 1336 aa15.68■□□□□ 0.1
CHFR-208ENST00000511001 SNED1Q8TER0 1413 aa15.68■□□□□ 0.1
CHFR-208ENST00000511001 GLTPD2A6NH11 291 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms