RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 ABCF2Q9UG63 623 aa15.34■□□□□ 0.05
LIN54-210ENST00000510877 DNAAF4Q8WXU2 420 aa15.34■□□□□ 0.05
LIN54-210ENST00000510877 CCDC136Q96JN2 1154 aa15.34■□□□□ 0.05
LIN54-210ENST00000510877 PHACTR3Q96KR7 559 aa15.34■□□□□ 0.05
LIN54-210ENST00000510877 NOP58Q9Y2X3 529 aaKnown RBP15.34■□□□□ 0.05
LIN54-210ENST00000510877 UFL1O94874 794 aa15.34■□□□□ 0.05
LIN54-210ENST00000510877 TCIRG1Q13488 830 aa15.34■□□□□ 0.05
LIN54-210ENST00000510877 TNIP1Q15025 636 aa15.34■□□□□ 0.05
LIN54-210ENST00000510877 MAP3K2Q9Y2U5 619 aa15.34■□□□□ 0.05
LIN54-210ENST00000510877 APPP05067 770 aa15.33■□□□□ 0.05
LIN54-210ENST00000510877 COL23A1Q86Y22 540 aaPredicted RBP15.33■□□□□ 0.05
LIN54-210ENST00000510877 SULF1Q8IWU6 871 aa15.33■□□□□ 0.05
LIN54-210ENST00000510877 WWC1Q8IX03 1113 aa15.33■□□□□ 0.05
LIN54-210ENST00000510877 SIL1Q9H173 461 aa15.33■□□□□ 0.05
LIN54-210ENST00000510877 NARFQ9UHQ1 456 aa15.33■□□□□ 0.05
LIN54-210ENST00000510877 IGSF1Q8N6C5 1336 aa15.33■□□□□ 0.05
LIN54-210ENST00000510877 DCPSQ96C86 337 aaKnown RBP15.33■□□□□ 0.04
LIN54-210ENST00000510877 SYT17Q9BSW7 474 aa15.33■□□□□ 0.04
LIN54-210ENST00000510877 LTBP4Q8N2S1 1624 aa15.33■□□□□ 0.04
LIN54-210ENST00000510877 PRKCSHP14314 528 aaPredicted RBP15.33■□□□□ 0.04
LIN54-210ENST00000510877 CCDC158Q5M9N0 1113 aa15.33■□□□□ 0.04
LIN54-210ENST00000510877 MASTLQ96GX5 879 aa15.33■□□□□ 0.04
LIN54-210ENST00000510877 GGA1Q9UJY5 639 aa15.33■□□□□ 0.04
LIN54-210ENST00000510877 MROH1Q8NDA8 1641 aa15.33■□□□□ 0.04
LIN54-210ENST00000510877 F8W031 263 aaPredicted RBP15.32■□□□□ 0.04
LIN54-210ENST00000510877 UPF2Q9HAU5 1272 aaKnown RBP15.32■□□□□ 0.04
LIN54-210ENST00000510877 POLR1AO95602 1720 aaPredicted RBP15.32■□□□□ 0.04
LIN54-210ENST00000510877 PI4KAP2A4QPH2 592 aa15.32■□□□□ 0.04
LIN54-210ENST00000510877 PI4KAP1Q8N8J0 262 aa15.32■□□□□ 0.04
LIN54-210ENST00000510877 ANO8Q9HCE9 1232 aaPredicted RBP15.32■□□□□ 0.04
LIN54-210ENST00000510877 RTN4Q9NQC3 1192 aaKnown RBP15.32■□□□□ 0.04
LIN54-210ENST00000510877 SLF2Q8IX21 1173 aa15.32■□□□□ 0.04
LIN54-210ENST00000510877 USP16Q9Y5T5 823 aa15.32■□□□□ 0.04
LIN54-210ENST00000510877 DDX21Q9NR30 783 aaKnown RBP eCLIP15.31■□□□□ 0.04
LIN54-210ENST00000510877 CD2APQ9Y5K6 639 aa15.31■□□□□ 0.04
LIN54-210ENST00000510877 NPR1P16066 1061 aa15.31■□□□□ 0.04
LIN54-210ENST00000510877 JARID2Q92833 1246 aaPredicted RBP15.31■□□□□ 0.04
LIN54-210ENST00000510877 VSIG10Q8N0Z9 540 aa15.31■□□□□ 0.04
LIN54-210ENST00000510877 RAI14Q9P0K7 980 aa15.31■□□□□ 0.04
LIN54-210ENST00000510877 LAMC1P11047 1609 aa15.31■□□□□ 0.04
LIN54-210ENST00000510877 CCT4P50991 539 aaKnown RBP15.3■□□□□ 0.04
LIN54-210ENST00000510877 RC3H1Q5TC82 1133 aaKnown RBP15.3■□□□□ 0.04
LIN54-210ENST00000510877 ZNF804AQ7Z570 1209 aa15.3■□□□□ 0.04
LIN54-210ENST00000510877 DZIP1Q86YF9 867 aaKnown RBP15.3■□□□□ 0.04
LIN54-210ENST00000510877 WDR63Q8IWG1 891 aa15.3■□□□□ 0.04
LIN54-210ENST00000510877 FAM89AQ96GI7 184 aa15.3■□□□□ 0.04
LIN54-210ENST00000510877 NAP1L5Q96NT1 182 aaPredicted RBP15.3■□□□□ 0.04
LIN54-210ENST00000510877 MED1Q15648 1581 aaPredicted RBP15.3■□□□□ 0.04
LIN54-210ENST00000510877 ANKRD2Q9GZV1 360 aa15.29■□□□□ 0.04
LIN54-210ENST00000510877 CHRNA5P30532 468 aa15.29■□□□□ 0.04
LIN54-210ENST00000510877 LRP2BPQ9P2M1 347 aa15.29■□□□□ 0.04
LIN54-210ENST00000510877 BIN2Q9UBW5 565 aaPredicted RBP15.29■□□□□ 0.04
LIN54-210ENST00000510877 CAMKK2Q96RR4 588 aa15.29■□□□□ 0.04
LIN54-210ENST00000510877 SLC5A1P13866 664 aa15.29■□□□□ 0.04
LIN54-210ENST00000510877 DPEP1P16444 411 aa15.29■□□□□ 0.04
LIN54-210ENST00000510877 WDR78Q5VTH9 848 aa15.29■□□□□ 0.04
LIN54-210ENST00000510877 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
LIN54-210ENST00000510877 TTC39AQ5SRH9 613 aa15.28■□□□□ 0.04
LIN54-210ENST00000510877 SURF6O75683 361 aaKnown RBP15.28■□□□□ 0.04
LIN54-210ENST00000510877 CDK11BP21127 795 aaKnown RBP15.28■□□□□ 0.04
LIN54-210ENST00000510877 SLC4A3P48751 1232 aa15.28■□□□□ 0.04
LIN54-210ENST00000510877 IKQ13123 557 aaPredicted RBP15.28■□□□□ 0.04
LIN54-210ENST00000510877 C9orf131Q5VYM1 1079 aa15.28■□□□□ 0.04
LIN54-210ENST00000510877 TNNI2P48788 182 aa15.28■□□□□ 0.04
LIN54-210ENST00000510877 CRACR2BQ8N4Y2 399 aaPredicted RBP15.28■□□□□ 0.04
LIN54-210ENST00000510877 SMIM5Q71RC9 77 aa15.27■□□□□ 0.04
LIN54-210ENST00000510877 RSPH6AQ9H0K4 717 aa15.27■□□□□ 0.04
LIN54-210ENST00000510877 TGFB2P61812 414 aa15.27■□□□□ 0.04
LIN54-210ENST00000510877 FLIIQ13045 1269 aa15.27■□□□□ 0.04
LIN54-210ENST00000510877 IL17REQ8NFR9 667 aa15.27■□□□□ 0.03
LIN54-210ENST00000510877 TRIM6-TRIM34B2RNG4 842 aa15.27■□□□□ 0.03
LIN54-210ENST00000510877 KIAA1211Q6ZU35 1233 aa15.26■□□□□ 0.03
LIN54-210ENST00000510877 RGS12O14924 1447 aa15.26■□□□□ 0.03
LIN54-210ENST00000510877 ATP2B2Q01814 1243 aa15.26■□□□□ 0.03
LIN54-210ENST00000510877 PLBD2Q8NHP8 589 aa15.26■□□□□ 0.03
LIN54-210ENST00000510877 RBM19Q9Y4C8 960 aaKnown RBP15.26■□□□□ 0.03
LIN54-210ENST00000510877 ATRNO75882 1429 aa15.26■□□□□ 0.03
LIN54-210ENST00000510877 PPEF1O14829 653 aaPredicted RBP15.25■□□□□ 0.03
LIN54-210ENST00000510877 BRIP1Q9BX63 1249 aa15.25■□□□□ 0.03
LIN54-210ENST00000510877 RPS8P62241 208 aaKnown RBP15.25■□□□□ 0.03
LIN54-210ENST00000510877 CLEC4GQ6UXB4 293 aa15.25■□□□□ 0.03
LIN54-210ENST00000510877 CLASRPQ8N2M8 674 aaKnown RBP15.25■□□□□ 0.03
LIN54-210ENST00000510877 ZNF142P52746 1687 aaPredicted RBP15.25■□□□□ 0.03
LIN54-210ENST00000510877 PRKG1Q13976 671 aa15.25■□□□□ 0.03
LIN54-210ENST00000510877 NFIXQ14938 502 aa15.25■□□□□ 0.03
LIN54-210ENST00000510877 RCAN3Q9UKA8 241 aa15.25■□□□□ 0.03
LIN54-210ENST00000510877 AKAP2Q9Y2D5 859 aa15.25■□□□□ 0.03
LIN54-210ENST00000510877 VEGFAP15692 232 aaPredicted RBP15.24■□□□□ 0.03
LIN54-210ENST00000510877 KSR2Q6VAB6 950 aa15.24■□□□□ 0.03
LIN54-210ENST00000510877 MBIPQ9NS73 344 aa15.24■□□□□ 0.03
LIN54-210ENST00000510877 BBOX1O75936 387 aa15.24■□□□□ 0.03
LIN54-210ENST00000510877 LDHCP07864 332 aa15.24■□□□□ 0.03
LIN54-210ENST00000510877 BABAM1Q9NWV8 329 aa15.24■□□□□ 0.03
LIN54-210ENST00000510877 ATF7IPQ6VMQ6 1270 aa15.24■□□□□ 0.03
LIN54-210ENST00000510877 LINC00116Q8NCU8 138 aa15.24■□□□□ 0.03
LIN54-210ENST00000510877 DHX16O60231 1041 aaKnown RBP15.24■□□□□ 0.03
LIN54-210ENST00000510877 ARHGEF6Q15052 776 aa15.24■□□□□ 0.03
LIN54-210ENST00000510877 TMC4Q7Z404 712 aa15.24■□□□□ 0.03
LIN54-210ENST00000510877 DZIP1LQ8IYY4 767 aaKnown RBP15.24■□□□□ 0.03
LIN54-210ENST00000510877 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms