RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 FIGNL1Q6PIW4 674 aa12.74□□□□□ -0.37
TRAPPC11-206ENST00000509857 CAPN12Q6ZSI9 719 aa12.74□□□□□ -0.37
TRAPPC11-206ENST00000509857 GPR161Q8N6U8 529 aaKnown RBP12.74□□□□□ -0.37
TRAPPC11-206ENST00000509857 GTPBP3Q969Y2 492 aaKnown RBP12.74□□□□□ -0.37
TRAPPC11-206ENST00000509857 NDFIP2Q9NV92 336 aa12.74□□□□□ -0.37
TRAPPC11-206ENST00000509857 HIF1AQ16665 826 aa12.73□□□□□ -0.37
TRAPPC11-206ENST00000509857 MKNK1Q9BUB5 465 aa12.73□□□□□ -0.37
TRAPPC11-206ENST00000509857 FOXR1Q6PIV2 292 aa12.72□□□□□ -0.37
TRAPPC11-206ENST00000509857 SUSD3Q96L08 255 aa12.72□□□□□ -0.37
TRAPPC11-206ENST00000509857 ZCCHC2Q9C0B9 1178 aaKnown RBP12.72□□□□□ -0.37
TRAPPC11-206ENST00000509857 ANKIB1Q9P2G1 1089 aa12.72□□□□□ -0.37
TRAPPC11-206ENST00000509857 COX20Q5RI15 118 aa12.71□□□□□ -0.37
TRAPPC11-206ENST00000509857 C16orf46Q6P387 395 aa12.71□□□□□ -0.37
TRAPPC11-206ENST00000509857 LRRC69Q6ZNQ3 347 aa12.71□□□□□ -0.37
TRAPPC11-206ENST00000509857 PCDHGC4Q9Y5F7 938 aa12.71□□□□□ -0.37
TRAPPC11-206ENST00000509857 FAM157BP0CG42 384 aa12.7□□□□□ -0.38
TRAPPC11-206ENST00000509857 IER5Q5VY09 327 aa12.7□□□□□ -0.38
TRAPPC11-206ENST00000509857 CFHR5Q9BXR6 569 aa12.7□□□□□ -0.38
TRAPPC11-206ENST00000509857 LRFN2Q9ULH4 789 aa12.7□□□□□ -0.38
TRAPPC11-206ENST00000509857 GJA3Q9Y6H8 435 aa12.7□□□□□ -0.38
TRAPPC11-206ENST00000509857 HSH2DQ96JZ2 352 aa12.69□□□□□ -0.38
TRAPPC11-206ENST00000509857 TRERF1Q96PN7 1200 aa12.69□□□□□ -0.38
TRAPPC11-206ENST00000509857 TRAIPQ9BWF2 469 aa12.69□□□□□ -0.38
TRAPPC11-206ENST00000509857 SAP130Q9H0E3 1048 aa12.69□□□□□ -0.38
TRAPPC11-206ENST00000509857 SEPT3Q9UH03 358 aa12.69□□□□□ -0.38
TRAPPC11-206ENST00000509857 BCS1LQ9Y276 419 aa12.69□□□□□ -0.38
TRAPPC11-206ENST00000509857 ATXN7O15265 892 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC11-206ENST00000509857 SCNN1AP37088 669 aa12.68□□□□□ -0.38
TRAPPC11-206ENST00000509857 DGKZQ13574 1117 aa12.68□□□□□ -0.38
TRAPPC11-206ENST00000509857 GAS6Q14393 721 aa12.68□□□□□ -0.38
TRAPPC11-206ENST00000509857 ZNF280CQ8ND82 737 aa12.68□□□□□ -0.38
TRAPPC11-206ENST00000509857 NEUROD4Q9HD90 331 aa12.68□□□□□ -0.38
TRAPPC11-206ENST00000509857 KLK14Q9P0G3 267 aa12.68□□□□□ -0.38
TRAPPC11-206ENST00000509857 ATXN7L1Q9ULK2 861 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC11-206ENST00000509857 TGFBR3LH3BV60 316 aa12.67□□□□□ -0.38
TRAPPC11-206ENST00000509857 GPR25O00155 361 aa12.67□□□□□ -0.38
TRAPPC11-206ENST00000509857 BNIP3LO60238 219 aa12.67□□□□□ -0.38
TRAPPC11-206ENST00000509857 C11orf91Q3C1V1 193 aa12.67□□□□□ -0.38
TRAPPC11-206ENST00000509857 PHF24Q9UPV7 400 aa12.67□□□□□ -0.38
TRAPPC11-206ENST00000509857 TNFRSF10BO14763 440 aa12.66□□□□□ -0.38
TRAPPC11-206ENST00000509857 EFSO43281 561 aa12.66□□□□□ -0.38
TRAPPC11-206ENST00000509857 BRD1O95696 1058 aa12.66□□□□□ -0.38
TRAPPC11-206ENST00000509857 GMPRP36959 345 aa12.66□□□□□ -0.38
TRAPPC11-206ENST00000509857 NAA30Q147X3 362 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC11-206ENST00000509857 DMGDHQ9UI17 866 aaKnown RBP12.66□□□□□ -0.38
TRAPPC11-206ENST00000509857 TNP2Q05952 138 aa12.65□□□□□ -0.38
TRAPPC11-206ENST00000509857 TYRO3Q06418 890 aa12.65□□□□□ -0.38
TRAPPC11-206ENST00000509857 ABHD17AQ96GS6 310 aa12.65□□□□□ -0.38
TRAPPC11-206ENST00000509857 COL25A1Q9BXS0 654 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC11-206ENST00000509857 KRT76Q01546 638 aa12.64□□□□□ -0.39
TRAPPC11-206ENST00000509857 LAMC2Q13753 1193 aa12.64□□□□□ -0.39
TRAPPC11-206ENST00000509857 RNFT1Q5M7Z0 435 aa12.64□□□□□ -0.39
TRAPPC11-206ENST00000509857 BTLAQ7Z6A9 289 aa12.64□□□□□ -0.39
TRAPPC11-206ENST00000509857 HELQQ8TDG4 1101 aa12.64□□□□□ -0.39
TRAPPC11-206ENST00000509857 HCN2Q9UL51 889 aa12.64□□□□□ -0.39
TRAPPC11-206ENST00000509857 MTMR7Q9Y216 660 aa12.64□□□□□ -0.39
TRAPPC11-206ENST00000509857 MAPTP10636 758 aaKnown RBP12.63□□□□□ -0.39
TRAPPC11-206ENST00000509857 ARID4AP29374 1257 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC11-206ENST00000509857 WIPF1O43516 503 aa12.62□□□□□ -0.39
TRAPPC11-206ENST00000509857 TXNDC2Q86VQ3 553 aa12.62□□□□□ -0.39
TRAPPC11-206ENST00000509857 IFT43Q96FT9 208 aa12.62□□□□□ -0.39
TRAPPC11-206ENST00000509857 DCDC2BA2VCK2 349 aa12.61□□□□□ -0.39
TRAPPC11-206ENST00000509857 FGFR3P22607 806 aa12.61□□□□□ -0.39
TRAPPC11-206ENST00000509857 GTF3C2Q8WUA4 911 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC11-206ENST00000509857 MBIPQ9NS73 344 aa12.61□□□□□ -0.39
TRAPPC11-206ENST00000509857 KHNYNO15037 678 aaKnown RBP12.6□□□□□ -0.39
TRAPPC11-206ENST00000509857 BRD2P25440 801 aaKnown RBP12.6□□□□□ -0.39
TRAPPC11-206ENST00000509857 KCNQ4P56696 695 aa12.6□□□□□ -0.39
TRAPPC11-206ENST00000509857 FAM182BQ5T319 152 aa12.6□□□□□ -0.39
TRAPPC11-206ENST00000509857 CEP63Q96MT8 703 aa12.6□□□□□ -0.39
TRAPPC11-206ENST00000509857 STIM2Q9P246 746 aa12.6□□□□□ -0.39
TRAPPC11-206ENST00000509857 ETFBKMTQ8IXQ9 262 aa12.59□□□□□ -0.39
TRAPPC11-206ENST00000509857 DNMT3AQ9Y6K1 912 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC11-206ENST00000509857 MICAL2O94851 1124 aa12.58□□□□□ -0.4
TRAPPC11-206ENST00000509857 INPP5BP32019 993 aa12.58□□□□□ -0.4
TRAPPC11-206ENST00000509857 FAM26DQ5JW98 314 aa12.58□□□□□ -0.4
TRAPPC11-206ENST00000509857 BRD7Q9NPI1 651 aa12.58□□□□□ -0.4
TRAPPC11-206ENST00000509857 STRN4Q9NRL3 753 aa12.58□□□□□ -0.4
TRAPPC11-206ENST00000509857 EGFL7Q9UHF1 273 aa12.58□□□□□ -0.4
TRAPPC11-206ENST00000509857 GNEQ9Y223 722 aaKnown RBP12.58□□□□□ -0.4
TRAPPC11-206ENST00000509857 MX2P20592 715 aa12.57□□□□□ -0.4
TRAPPC11-206ENST00000509857 SRSF11Q05519 484 aaKnown RBP12.57□□□□□ -0.4
TRAPPC11-206ENST00000509857 CNTNAP3BQ96NU0 1288 aa12.57□□□□□ -0.4
TRAPPC11-206ENST00000509857 CNTNAP3Q9BZ76 1288 aa12.57□□□□□ -0.4
TRAPPC11-206ENST00000509857 PDIA4P13667 645 aaKnown RBP12.56□□□□□ -0.4
TRAPPC11-206ENST00000509857 NPR3P17342 541 aa12.56□□□□□ -0.4
TRAPPC11-206ENST00000509857 IDH3AP50213 366 aa12.56□□□□□ -0.4
TRAPPC11-206ENST00000509857 TREML1Q86YW5 311 aa12.56□□□□□ -0.4
TRAPPC11-206ENST00000509857 ABTB2Q8N961 1025 aa12.56□□□□□ -0.4
TRAPPC11-206ENST00000509857 MARK1Q9P0L2 795 aa12.56□□□□□ -0.4
TRAPPC11-206ENST00000509857 CD33P20138 364 aa12.55□□□□□ -0.4
TRAPPC11-206ENST00000509857 CTBSQ01459 385 aa12.55□□□□□ -0.4
TRAPPC11-206ENST00000509857 SF3B2Q13435 895 aaKnown RBP12.55□□□□□ -0.4
TRAPPC11-206ENST00000509857 C2CD2LO14523 706 aa12.54□□□□□ -0.4
TRAPPC11-206ENST00000509857 SLURP2P0DP57 97 aa12.54□□□□□ -0.4
TRAPPC11-206ENST00000509857 SERPINB4P48594 390 aa12.54□□□□□ -0.4
TRAPPC11-206ENST00000509857 ARSDP51689 593 aa12.54□□□□□ -0.4
TRAPPC11-206ENST00000509857 KCNA1Q09470 495 aa12.54□□□□□ -0.4
TRAPPC11-206ENST00000509857 SFSWAPQ12872 951 aaKnown RBP12.54□□□□□ -0.4
TRAPPC11-206ENST00000509857 CCER1Q8TC90 406 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms