RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 U2AF1L5P0DN76 240 aaPredicted RBP21.35■■□□□ 1.01
RAB40C-202ENST00000509637 PDE6BP35913 854 aa21.35■■□□□ 1.01
RAB40C-202ENST00000509637 U2AF1Q01081 240 aaKnown RBP eCLIP21.35■■□□□ 1.01
RAB40C-202ENST00000509637 SETDB2Q96T68 719 aa21.35■■□□□ 1.01
RAB40C-202ENST00000509637 POTEIP0CG38 1075 aa21.34■■□□□ 1.01
RAB40C-202ENST00000509637 POTEJP0CG39 1038 aa21.34■■□□□ 1.01
RAB40C-202ENST00000509637 COL13A1Q5TAT6 717 aaPredicted RBP21.34■■□□□ 1.01
RAB40C-202ENST00000509637 OLFM4Q6UX06 510 aa21.34■■□□□ 1.01
RAB40C-202ENST00000509637 CACNA1SQ13698 1873 aa21.34■■□□□ 1.01
RAB40C-202ENST00000509637 CNBD1Q8NA66 436 aa21.33■■□□□ 1.01
RAB40C-202ENST00000509637 HLFQ16534 295 aa21.32■■□□□ 1
RAB40C-202ENST00000509637 STYK1Q6J9G0 422 aa21.32■■□□□ 1
RAB40C-202ENST00000509637 PRPF40BQ6NWY9 871 aaKnown RBP21.32■■□□□ 1
RAB40C-202ENST00000509637 DDNO94850 711 aaPredicted RBP21.31■■□□□ 1
RAB40C-202ENST00000509637 SNRPA1P09661 255 aaKnown RBP21.31■■□□□ 1
RAB40C-202ENST00000509637 ERFEQ4G0M1 354 aa21.31■■□□□ 1
RAB40C-202ENST00000509637 CFAP53Q96M91 514 aa21.31■■□□□ 1
RAB40C-202ENST00000509637 LTBP3Q9NS15 1303 aa21.3■■□□□ 1
RAB40C-202ENST00000509637 KLRG2A4D1S0 409 aaPredicted RBP21.3■■□□□ 1
RAB40C-202ENST00000509637 SLC51AQ86UW1 340 aa21.29■■□□□ 1
RAB40C-202ENST00000509637 MASTLQ96GX5 879 aa21.29■■□□□ 1
RAB40C-202ENST00000509637 PDZRN3Q9UPQ7 1066 aa21.29■■□□□ 1
RAB40C-202ENST00000509637 NUDCQ9Y266 331 aa21.29■■□□□ 1
RAB40C-202ENST00000509637 ARFGEF2Q9Y6D5 1785 aa21.28■■□□□ 1
RAB40C-202ENST00000509637 CLEC4GQ6UXB4 293 aa21.28■■□□□ 1
RAB40C-202ENST00000509637 CNKSR1Q969H4 720 aa21.28■■□□□ 1
RAB40C-202ENST00000509637 TAOK3Q9H2K8 898 aa21.28■■□□□ 1
RAB40C-202ENST00000509637 FAM177BA6PVY3 158 aa21.27■■□□□ 1
RAB40C-202ENST00000509637 NBPF5PQ86XG9 351 aaPredicted RBP21.27■■□□□ 1
RAB40C-202ENST00000509637 PLEKHF1Q96S99 279 aa21.27■■□□□ 1
RAB40C-202ENST00000509637 ST5P78524 1137 aa21.26■□□□□ 0.99
RAB40C-202ENST00000509637 TAF7Q15545 349 aaPredicted RBP21.26■□□□□ 0.99
RAB40C-202ENST00000509637 THUMPD2Q9BTF0 503 aaKnown RBP21.26■□□□□ 0.99
RAB40C-202ENST00000509637 DLG5Q8TDM6 1919 aa21.25■□□□□ 0.99
RAB40C-202ENST00000509637 HTATSF1O43719 755 aaKnown RBP21.25■□□□□ 0.99
RAB40C-202ENST00000509637 DPY19L2Q6NUT2 758 aa21.25■□□□□ 0.99
RAB40C-202ENST00000509637 RTF1Q92541 710 aaKnown RBP21.25■□□□□ 0.99
RAB40C-202ENST00000509637 NIP7Q9Y221 180 aaKnown RBP eCLIP21.25■□□□□ 0.99
RAB40C-202ENST00000509637 SNED1Q8TER0 1413 aa21.23■□□□□ 0.99
RAB40C-202ENST00000509637 TTLL7Q6ZT98 887 aa21.23■□□□□ 0.99
RAB40C-202ENST00000509637 ZNF541Q9H0D2 1346 aa21.23■□□□□ 0.99
RAB40C-202ENST00000509637 ABCC12Q96J65 1359 aa21.23■□□□□ 0.99
RAB40C-202ENST00000509637 PCNTO95613 3336 aa21.22■□□□□ 0.99
RAB40C-202ENST00000509637 NPR1P16066 1061 aa21.22■□□□□ 0.99
RAB40C-202ENST00000509637 NGEFQ8N5V2 710 aa21.22■□□□□ 0.99
RAB40C-202ENST00000509637 ZNF277Q9NRM2 450 aaPredicted RBP21.22■□□□□ 0.99
RAB40C-202ENST00000509637 KDM3BQ7LBC6 1761 aa21.21■□□□□ 0.99
RAB40C-202ENST00000509637 NPHP1O15259 732 aa21.21■□□□□ 0.99
RAB40C-202ENST00000509637 EIF4A1P60842 406 aaKnown RBP21.21■□□□□ 0.99
RAB40C-202ENST00000509637 NPM2Q86SE8 214 aaKnown RBP21.21■□□□□ 0.99
RAB40C-202ENST00000509637 CHADLQ6NUI6 762 aa21.2■□□□□ 0.98
RAB40C-202ENST00000509637 TPTE2Q6XPS3 522 aa21.2■□□□□ 0.98
RAB40C-202ENST00000509637 NUTM1Q86Y26 1132 aa21.2■□□□□ 0.98
RAB40C-202ENST00000509637 COL4A5P29400 1685 aa21.2■□□□□ 0.98
RAB40C-202ENST00000509637 HSPA1AP0DMV8 641 aaKnown RBP21.19■□□□□ 0.98
RAB40C-202ENST00000509637 HSPA1BP0DMV9 641 aaKnown RBP21.19■□□□□ 0.98
RAB40C-202ENST00000509637 FKBP4Q02790 459 aaKnown RBP eCLIP21.19■□□□□ 0.98
RAB40C-202ENST00000509637 CCDC93Q567U6 631 aa21.19■□□□□ 0.98
RAB40C-202ENST00000509637 NUP98P52948 1817 aa21.18■□□□□ 0.98
RAB40C-202ENST00000509637 RGL2O15211 777 aa21.18■□□□□ 0.98
RAB40C-202ENST00000509637 C3orf67Q6ZVT6 689 aa21.18■□□□□ 0.98
RAB40C-202ENST00000509637 L3MBTL3Q96JM7 780 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-202ENST00000509637 TAF1DQ9H5J8 278 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-202ENST00000509637 ZNF652Q9Y2D9 606 aa21.18■□□□□ 0.98
RAB40C-202ENST00000509637 UBN2Q6ZU65 1347 aa21.18■□□□□ 0.98
RAB40C-202ENST00000509637 LAMB4A4D0S4 1761 aa21.18■□□□□ 0.98
RAB40C-202ENST00000509637 LRP10Q7Z4F1 713 aa21.17■□□□□ 0.98
RAB40C-202ENST00000509637 RRP7AQ9Y3A4 280 aaKnown RBP21.17■□□□□ 0.98
RAB40C-202ENST00000509637 PASKQ96RG2 1323 aa21.16■□□□□ 0.98
RAB40C-202ENST00000509637 ITGBL1O95965 494 aaPredicted RBP21.16■□□□□ 0.98
RAB40C-202ENST00000509637 CRY2Q49AN0 593 aa21.16■□□□□ 0.98
RAB40C-202ENST00000509637 SOGA3Q5TF21 947 aa21.16■□□□□ 0.98
RAB40C-202ENST00000509637 SYNE4Q8N205 404 aa21.16■□□□□ 0.98
RAB40C-202ENST00000509637 MKRN1Q9UHC7 482 aaKnown RBP21.16■□□□□ 0.98
RAB40C-202ENST00000509637 MAP3K15Q6ZN16 1313 aa21.15■□□□□ 0.98
RAB40C-202ENST00000509637 NFE2L2Q16236 605 aa21.15■□□□□ 0.98
RAB40C-202ENST00000509637 SUSD4Q5VX71 490 aa21.15■□□□□ 0.98
RAB40C-202ENST00000509637 ERVV-1B6SEH8 477 aa21.14■□□□□ 0.97
RAB40C-202ENST00000509637 FZD9O00144 591 aa21.14■□□□□ 0.97
RAB40C-202ENST00000509637 GPTP24298 496 aa21.14■□□□□ 0.97
RAB40C-202ENST00000509637 PDIA6Q15084 440 aa21.14■□□□□ 0.97
RAB40C-202ENST00000509637 ADAMTSL1Q8N6G6 1762 aa21.13■□□□□ 0.97
RAB40C-202ENST00000509637 MYL6BP14649 208 aa21.13■□□□□ 0.97
RAB40C-202ENST00000509637 ZNF34Q8IZ26 560 aa21.13■□□□□ 0.97
RAB40C-202ENST00000509637 ZBTB3Q9H5J0 574 aa21.13■□□□□ 0.97
RAB40C-202ENST00000509637 CREBZFQ9NS37 354 aa21.13■□□□□ 0.97
RAB40C-202ENST00000509637 SCN4AP35499 1836 aa21.13■□□□□ 0.97
RAB40C-202ENST00000509637 IARSP41252 1262 aaKnown RBP21.12■□□□□ 0.97
RAB40C-202ENST00000509637 PROSER3Q2NL68 480 aa21.12■□□□□ 0.97
RAB40C-202ENST00000509637 ANXA1P04083 346 aa21.11■□□□□ 0.97
RAB40C-202ENST00000509637 LTBP1Q14766 1721 aa21.1■□□□□ 0.97
RAB40C-202ENST00000509637 CAPN15O75808 1086 aa21.1■□□□□ 0.97
RAB40C-202ENST00000509637 NTSR2O95665 410 aa21.1■□□□□ 0.97
RAB40C-202ENST00000509637 HOXA10P31260 410 aaPredicted RBP21.1■□□□□ 0.97
RAB40C-202ENST00000509637 LDHDQ86WU2 507 aa21.1■□□□□ 0.97
RAB40C-202ENST00000509637 RTKN2Q8IZC4 609 aa21.1■□□□□ 0.97
RAB40C-202ENST00000509637 TNS4Q8IZW8 715 aa21.1■□□□□ 0.97
RAB40C-202ENST00000509637 PNISRQ8TF01 805 aaKnown RBP21.1■□□□□ 0.97
RAB40C-202ENST00000509637 RNF123Q5XPI4 1314 aa21.09■□□□□ 0.97
RAB40C-202ENST00000509637 ALDH1B1P30837 517 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms