RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 MAMSTRQ6ZN01 415 aa9.65□□□□□ -0.86
TRIO-213ENST00000509354 NFATC2IPQ8NCF5 419 aa9.65□□□□□ -0.86
TRIO-213ENST00000509354 CFAP53Q96M91 514 aa9.65□□□□□ -0.86
TRIO-213ENST00000509354 YTHDC1Q96MU7 727 aaKnown RBP9.65□□□□□ -0.86
TRIO-213ENST00000509354 ARXQ96QS3 562 aa9.65□□□□□ -0.86
TRIO-213ENST00000509354 RSPH6AQ9H0K4 717 aa9.65□□□□□ -0.86
TRIO-213ENST00000509354 KIF13BQ9NQT8 1826 aa9.65□□□□□ -0.86
TRIO-213ENST00000509354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.64□□□□□ -0.87
TRIO-213ENST00000509354 GNPATO15228 680 aa9.64□□□□□ -0.87
TRIO-213ENST00000509354 PRKAR2BP31323 418 aa9.64□□□□□ -0.87
TRIO-213ENST00000509354 SLC16A10Q8TF71 515 aa9.64□□□□□ -0.87
TRIO-213ENST00000509354 SCUBE2Q9NQ36 999 aa9.64□□□□□ -0.87
TRIO-213ENST00000509354 N4BP2Q86UW6 1770 aaPredicted RBP9.64□□□□□ -0.87
TRIO-213ENST00000509354 KDM3BQ7LBC6 1761 aa9.63□□□□□ -0.87
TRIO-213ENST00000509354 POTEFA5A3E0 1075 aa9.63□□□□□ -0.87
TRIO-213ENST00000509354 SLC39A6Q13433 755 aa9.63□□□□□ -0.87
TRIO-213ENST00000509354 PHACTR3Q96KR7 559 aa9.63□□□□□ -0.87
TRIO-213ENST00000509354 SLC52A2Q9HAB3 445 aa9.63□□□□□ -0.87
TRIO-213ENST00000509354 AFDNP55196 1824 aaKnown RBP9.63□□□□□ -0.87
TRIO-213ENST00000509354 LAMB4A4D0S4 1761 aa9.63□□□□□ -0.87
TRIO-213ENST00000509354 SCN7AQ01118 1682 aa9.62□□□□□ -0.87
TRIO-213ENST00000509354 U2AF1L5P0DN76 240 aaPredicted RBP9.62□□□□□ -0.87
TRIO-213ENST00000509354 SSFA2P28290 1259 aa9.62□□□□□ -0.87
TRIO-213ENST00000509354 POLD1P28340 1107 aa9.62□□□□□ -0.87
TRIO-213ENST00000509354 FOXK1P85037 733 aa9.62□□□□□ -0.87
TRIO-213ENST00000509354 U2AF1Q01081 240 aaKnown RBP eCLIP9.62□□□□□ -0.87
TRIO-213ENST00000509354 NLGN2Q8NFZ4 835 aa9.62□□□□□ -0.87
TRIO-213ENST00000509354 SYT17Q9BSW7 474 aa9.62□□□□□ -0.87
TRIO-213ENST00000509354 BRCA1P38398 1863 aaKnown RBP9.62□□□□□ -0.87
TRIO-213ENST00000509354 CNTNAP4Q9C0A0 1308 aa9.61□□□□□ -0.87
TRIO-213ENST00000509354 TULP1O00294 542 aaPredicted RBP9.61□□□□□ -0.87
TRIO-213ENST00000509354 GAS2L2Q8NHY3 880 aa9.61□□□□□ -0.87
TRIO-213ENST00000509354 KCNV2Q8TDN2 545 aa9.61□□□□□ -0.87
TRIO-213ENST00000509354 ARHGEF1Q92888 912 aaKnown RBP9.61□□□□□ -0.87
TRIO-213ENST00000509354 BCORQ6W2J9 1755 aa9.6□□□□□ -0.87
TRIO-213ENST00000509354 C2orf72A6NCS6 295 aa9.6□□□□□ -0.87
TRIO-213ENST00000509354 GNAT3A8MTJ3 354 aa9.6□□□□□ -0.87
TRIO-213ENST00000509354 CRKLP46109 303 aaKnown RBP9.6□□□□□ -0.87
TRIO-213ENST00000509354 DNAJC10Q8IXB1 793 aa9.6□□□□□ -0.87
TRIO-213ENST00000509354 FLAD1Q8NFF5 587 aa9.6□□□□□ -0.87
TRIO-213ENST00000509354 IL17REQ8NFR9 667 aa9.6□□□□□ -0.87
TRIO-213ENST00000509354 NUDCQ9Y266 331 aa9.6□□□□□ -0.87
TRIO-213ENST00000509354 CEMIPQ8WUJ3 1361 aa9.6□□□□□ -0.87
TRIO-213ENST00000509354 HNRNPUQ00839 825 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRIO-213ENST00000509354 TEFQ10587 303 aa9.58□□□□□ -0.88
TRIO-213ENST00000509354 DSG2Q14126 1118 aa9.58□□□□□ -0.88
TRIO-213ENST00000509354 DCTN1Q14203 1278 aa9.58□□□□□ -0.88
TRIO-213ENST00000509354 RC3H1Q5TC82 1133 aaKnown RBP9.58□□□□□ -0.88
TRIO-213ENST00000509354 INTS5Q6P9B9 1019 aaKnown RBP9.58□□□□□ -0.88
TRIO-213ENST00000509354 FAM9BQ8IZU0 186 aa9.58□□□□□ -0.88
TRIO-213ENST00000509354 SRP68Q9UHB9 627 aaKnown RBP9.58□□□□□ -0.88
TRIO-213ENST00000509354 RTCBQ9Y3I0 505 aaKnown RBP9.58□□□□□ -0.88
TRIO-213ENST00000509354 NRXN2Q9P2S2 1712 aa9.57□□□□□ -0.88
TRIO-213ENST00000509354 KIF3CO14782 793 aa9.57□□□□□ -0.88
TRIO-213ENST00000509354 KCNQ3O43525 872 aa9.57□□□□□ -0.88
TRIO-213ENST00000509354 RPS6KA4O75676 772 aa9.57□□□□□ -0.88
TRIO-213ENST00000509354 CYP19A1P11511 503 aaPredicted RBP9.57□□□□□ -0.88
TRIO-213ENST00000509354 MCM10Q7L590 875 aa9.57□□□□□ -0.88
TRIO-213ENST00000509354 PLPP6Q8IY26 295 aa9.57□□□□□ -0.88
TRIO-213ENST00000509354 CCDC87Q9NVE4 849 aa9.57□□□□□ -0.88
TRIO-213ENST00000509354 CACNA1SQ13698 1873 aa9.57□□□□□ -0.88
TRIO-213ENST00000509354 ANKRD31Q8N7Z5 1873 aa9.57□□□□□ -0.88
TRIO-213ENST00000509354 ZNF521Q96K83 1311 aa9.56□□□□□ -0.88
TRIO-213ENST00000509354 DLEC1Q9Y238 1755 aa9.56□□□□□ -0.88
TRIO-213ENST00000509354 COL15A1P39059 1388 aa9.56□□□□□ -0.88
TRIO-213ENST00000509354 HEG1Q9ULI3 1381 aa9.56□□□□□ -0.88
TRIO-213ENST00000509354 FCHSD2O94868 740 aa9.56□□□□□ -0.88
TRIO-213ENST00000509354 MMP10P09238 476 aa9.56□□□□□ -0.88
TRIO-213ENST00000509354 GYS1P13807 737 aa9.56□□□□□ -0.88
TRIO-213ENST00000509354 CAMK2BQ13554 666 aa9.56□□□□□ -0.88
TRIO-213ENST00000509354 NGEFQ8N5V2 710 aa9.56□□□□□ -0.88
TRIO-213ENST00000509354 ZNF496Q96IT1 587 aaPredicted RBP9.56□□□□□ -0.88
TRIO-213ENST00000509354 WWC3Q9ULE0 1092 aa9.56□□□□□ -0.88
TRIO-213ENST00000509354 ZBTB1Q9Y2K1 713 aa9.56□□□□□ -0.88
TRIO-213ENST00000509354 ARFGEF1Q9Y6D6 1849 aa9.56□□□□□ -0.88
TRIO-213ENST00000509354 COL11A2P13942 1736 aaPredicted RBP9.56□□□□□ -0.88
TRIO-213ENST00000509354 C10orf71Q711Q0 1435 aa9.56□□□□□ -0.88
TRIO-213ENST00000509354 SOS1Q07889 1333 aaPredicted RBP9.56□□□□□ -0.88
TRIO-213ENST00000509354 USP42Q9H9J4 1324 aaKnown RBP9.56□□□□□ -0.88
TRIO-213ENST00000509354 PXDNLA1KZ92 1463 aa9.55□□□□□ -0.88
TRIO-213ENST00000509354 YBX3P16989 372 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRIO-213ENST00000509354 HMGB2P26583 209 aaKnown RBP9.55□□□□□ -0.88
TRIO-213ENST00000509354 RFC4P35249 363 aa9.55□□□□□ -0.88
TRIO-213ENST00000509354 TRAPPC3LQ5T215 181 aa9.55□□□□□ -0.88
TRIO-213ENST00000509354 ZNF790Q6PG37 636 aa9.55□□□□□ -0.88
TRIO-213ENST00000509354 TTC5Q8N0Z6 440 aa9.55□□□□□ -0.88
TRIO-213ENST00000509354 PLEKHF1Q96S99 279 aa9.55□□□□□ -0.88
TRIO-213ENST00000509354 ADAMTS8Q9UP79 889 aa9.55□□□□□ -0.88
TRIO-213ENST00000509354 RNF123Q5XPI4 1314 aa9.55□□□□□ -0.88
TRIO-213ENST00000509354 YY1P25490 414 aa9.54□□□□□ -0.88
TRIO-213ENST00000509354 THUMPD2Q9BTF0 503 aaKnown RBP9.54□□□□□ -0.88
TRIO-213ENST00000509354 ARIH1Q9Y4X5 557 aaPredicted RBP9.54□□□□□ -0.88
TRIO-213ENST00000509354 PRAMEF22A3QJZ6 481 aa9.53□□□□□ -0.88
TRIO-213ENST00000509354 BTBD11A6QL63 1104 aa9.53□□□□□ -0.88
TRIO-213ENST00000509354 CANXP27824 592 aaKnown RBP9.53□□□□□ -0.88
TRIO-213ENST00000509354 DDR1Q08345 913 aa9.53□□□□□ -0.88
TRIO-213ENST00000509354 NFE2L2Q16236 605 aa9.53□□□□□ -0.88
TRIO-213ENST00000509354 GPR162Q16538 588 aa9.53□□□□□ -0.88
TRIO-213ENST00000509354 RTF1Q92541 710 aaKnown RBP9.53□□□□□ -0.88
TRIO-213ENST00000509354 NUP98P52948 1817 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms