RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 A0A0G2JLW4 131 aa23.69■■□□□ 1.38
CLDND1-220ENST00000508902 DPEP1P16444 411 aa23.69■■□□□ 1.38
CLDND1-220ENST00000508902 GNAI1P63096 354 aa23.69■■□□□ 1.38
CLDND1-220ENST00000508902 DUSP27Q5VZP5 1158 aa23.69■■□□□ 1.38
CLDND1-220ENST00000508902 C8orf58Q8NAV2 365 aa23.69■■□□□ 1.38
CLDND1-220ENST00000508902 SPINK5Q9NQ38 1064 aaPredicted RBP23.69■■□□□ 1.38
CLDND1-220ENST00000508902 ANKRD36CQ5JPF3 1778 aa23.68■■□□□ 1.38
CLDND1-220ENST00000508902 CCDC24Q8N4L8 307 aa23.68■■□□□ 1.38
CLDND1-220ENST00000508902 TNRC6CQ9HCJ0 1690 aaKnown RBP23.67■■□□□ 1.38
CLDND1-220ENST00000508902 MAP3K15Q6ZN16 1313 aa23.67■■□□□ 1.38
CLDND1-220ENST00000508902 PRR5LQ6MZQ0 368 aa23.67■■□□□ 1.38
CLDND1-220ENST00000508902 TSPYL6Q8N831 410 aa23.67■■□□□ 1.38
CLDND1-220ENST00000508902 CHPF2Q9P2E5 772 aa23.67■■□□□ 1.38
CLDND1-220ENST00000508902 ARFGEF1Q9Y6D6 1849 aa23.67■■□□□ 1.38
CLDND1-220ENST00000508902 HOXB7P09629 217 aa23.66■■□□□ 1.38
CLDND1-220ENST00000508902 CHRNA5P30532 468 aa23.66■■□□□ 1.38
CLDND1-220ENST00000508902 TGFB2P61812 414 aa23.66■■□□□ 1.38
CLDND1-220ENST00000508902 PELP1Q8IZL8 1130 aaKnown RBP23.66■■□□□ 1.38
CLDND1-220ENST00000508902 ATP10DQ9P241 1426 aa23.66■■□□□ 1.38
CLDND1-220ENST00000508902 ZNF521Q96K83 1311 aa23.65■■□□□ 1.38
CLDND1-220ENST00000508902 CALD1Q05682 793 aaKnown RBP23.65■■□□□ 1.38
CLDND1-220ENST00000508902 GPR162Q16538 588 aa23.65■■□□□ 1.38
CLDND1-220ENST00000508902 HDGFL1Q5TGJ6 251 aa23.65■■□□□ 1.38
CLDND1-220ENST00000508902 CLEC4GQ6UXB4 293 aa23.65■■□□□ 1.38
CLDND1-220ENST00000508902 ZBTB3Q9H5J0 574 aa23.65■■□□□ 1.38
CLDND1-220ENST00000508902 IL16Q14005 1332 aa23.64■■□□□ 1.38
CLDND1-220ENST00000508902 UBN2Q6ZU65 1347 aa23.64■■□□□ 1.38
CLDND1-220ENST00000508902 CCER2I3L3R5 266 aa23.64■■□□□ 1.37
CLDND1-220ENST00000508902 ELL2O00472 640 aaPredicted RBP23.64■■□□□ 1.37
CLDND1-220ENST00000508902 RGL2O15211 777 aa23.64■■□□□ 1.37
CLDND1-220ENST00000508902 ARFGEF2Q9Y6D5 1785 aa23.63■■□□□ 1.37
CLDND1-220ENST00000508902 DDX21Q9NR30 783 aaKnown RBP eCLIP23.63■■□□□ 1.37
CLDND1-220ENST00000508902 FANCIQ9NVI1 1328 aa23.62■■□□□ 1.37
CLDND1-220ENST00000508902 ERVV-1B6SEH8 477 aa23.62■■□□□ 1.37
CLDND1-220ENST00000508902 NPM2Q86SE8 214 aaKnown RBP23.62■■□□□ 1.37
CLDND1-220ENST00000508902 MIER1Q8N108 512 aa23.62■■□□□ 1.37
CLDND1-220ENST00000508902 XAGE3Q8WTP9 111 aa23.62■■□□□ 1.37
CLDND1-220ENST00000508902 SETDB2Q96T68 719 aa23.62■■□□□ 1.37
CLDND1-220ENST00000508902 DIEXFQ68CQ4 756 aaKnown RBP23.61■■□□□ 1.37
CLDND1-220ENST00000508902 COPS6Q7L5N1 327 aa23.61■■□□□ 1.37
CLDND1-220ENST00000508902 NIP7Q9Y221 180 aaKnown RBP eCLIP23.61■■□□□ 1.37
CLDND1-220ENST00000508902 ABCC12Q96J65 1359 aa23.61■■□□□ 1.37
CLDND1-220ENST00000508902 CACNA1SQ13698 1873 aa23.6■■□□□ 1.37
CLDND1-220ENST00000508902 GIGYF2Q6Y7W6 1299 aaKnown RBP23.59■■□□□ 1.37
CLDND1-220ENST00000508902 KIF6Q6ZMV9 814 aa23.59■■□□□ 1.37
CLDND1-220ENST00000508902 WDR63Q8IWG1 891 aa23.59■■□□□ 1.37
CLDND1-220ENST00000508902 ZNF652Q9Y2D9 606 aa23.59■■□□□ 1.37
CLDND1-220ENST00000508902 AIMP1Q12904 312 aaKnown RBP23.58■■□□□ 1.37
CLDND1-220ENST00000508902 ZNF34Q8IZ26 560 aa23.58■■□□□ 1.37
CLDND1-220ENST00000508902 CNBD1Q8NA66 436 aa23.58■■□□□ 1.37
CLDND1-220ENST00000508902 GPTP24298 496 aa23.57■■□□□ 1.36
CLDND1-220ENST00000508902 DCAF8L1A6NGE4 600 aa23.56■■□□□ 1.36
CLDND1-220ENST00000508902 FAM177BA6PVY3 158 aa23.56■■□□□ 1.36
CLDND1-220ENST00000508902 PHAXQ9H814 394 aaKnown RBP23.56■■□□□ 1.36
CLDND1-220ENST00000508902 SLX4Q8IY92 1834 aa23.55■■□□□ 1.36
CLDND1-220ENST00000508902 SUSD4Q5VX71 490 aa23.55■■□□□ 1.36
CLDND1-220ENST00000508902 NBPF5PQ86XG9 351 aaPredicted RBP23.55■■□□□ 1.36
CLDND1-220ENST00000508902 BRIP1Q9BX63 1249 aa23.55■■□□□ 1.36
CLDND1-220ENST00000508902 DBF4Q9UBU7 674 aaPredicted RBP23.55■■□□□ 1.36
CLDND1-220ENST00000508902 BCS1LQ9Y276 419 aa23.55■■□□□ 1.36
CLDND1-220ENST00000508902 TCERG1O14776 1098 aaKnown RBP23.54■■□□□ 1.36
CLDND1-220ENST00000508902 C2CD5Q86YS7 1000 aa23.54■■□□□ 1.36
CLDND1-220ENST00000508902 LAMB2P55268 1798 aa23.54■■□□□ 1.36
CLDND1-220ENST00000508902 IBTKQ9P2D0 1353 aaPredicted RBP23.53■■□□□ 1.36
CLDND1-220ENST00000508902 NTSR2O95665 410 aa23.53■■□□□ 1.36
CLDND1-220ENST00000508902 NUTM1Q86Y26 1132 aa23.53■■□□□ 1.36
CLDND1-220ENST00000508902 GRIN3BO60391 1043 aa23.52■■□□□ 1.36
CLDND1-220ENST00000508902 YY1P25490 414 aa23.52■■□□□ 1.36
CLDND1-220ENST00000508902 EXOSC9Q06265 439 aaKnown RBP23.52■■□□□ 1.36
CLDND1-220ENST00000508902 TWISTNBQ3B726 338 aaPredicted RBP23.52■■□□□ 1.36
CLDND1-220ENST00000508902 PIM2Q9P1W9 311 aa23.52■■□□□ 1.36
CLDND1-220ENST00000508902 DDX60Q8IY21 1712 aaKnown RBP23.51■■□□□ 1.35
CLDND1-220ENST00000508902 HYPKQ9NX55 129 aa23.51■■□□□ 1.35
CLDND1-220ENST00000508902 SBF1O95248 1867 aa23.5■■□□□ 1.35
CLDND1-220ENST00000508902 KLRG2A4D1S0 409 aaPredicted RBP23.5■■□□□ 1.35
CLDND1-220ENST00000508902 ERFEQ4G0M1 354 aa23.5■■□□□ 1.35
CLDND1-220ENST00000508902 C3orf67Q6ZVT6 689 aa23.5■■□□□ 1.35
CLDND1-220ENST00000508902 ZNF428Q96B54 188 aa23.5■■□□□ 1.35
CLDND1-220ENST00000508902 RIC1Q4ADV7 1423 aa23.5■■□□□ 1.35
CLDND1-220ENST00000508902 VAMP4O75379 141 aa23.49■■□□□ 1.35
CLDND1-220ENST00000508902 SRGNP10124 158 aa23.49■■□□□ 1.35
CLDND1-220ENST00000508902 ST5P78524 1137 aa23.49■■□□□ 1.35
CLDND1-220ENST00000508902 DALRD3Q5D0E6 543 aaKnown RBP23.49■■□□□ 1.35
CLDND1-220ENST00000508902 G2E3Q7L622 706 aa23.49■■□□□ 1.35
CLDND1-220ENST00000508902 PLBD2Q8NHP8 589 aa23.49■■□□□ 1.35
CLDND1-220ENST00000508902 ADCY9O60503 1353 aa23.49■■□□□ 1.35
CLDND1-220ENST00000508902 CACNA1FO60840 1977 aa23.49■■□□□ 1.35
CLDND1-220ENST00000508902 PDE6BP35913 854 aa23.48■■□□□ 1.35
CLDND1-220ENST00000508902 TCIRG1Q13488 830 aa23.48■■□□□ 1.35
CLDND1-220ENST00000508902 NLRP10Q86W26 655 aa23.48■■□□□ 1.35
CLDND1-220ENST00000508902 SYNE4Q8N205 404 aa23.48■■□□□ 1.35
CLDND1-220ENST00000508902 FER1L6Q2WGJ9 1857 aa23.47■■□□□ 1.35
CLDND1-220ENST00000508902 H0YIN7 160 aa23.47■■□□□ 1.35
CLDND1-220ENST00000508902 CCDC30Q5VVM6 783 aa23.47■■□□□ 1.35
CLDND1-220ENST00000508902 TPTE2Q6XPS3 522 aa23.47■■□□□ 1.35
CLDND1-220ENST00000508902 ANKRD13DQ6ZTN6 518 aa23.47■■□□□ 1.35
CLDND1-220ENST00000508902 SLC51AQ86UW1 340 aa23.47■■□□□ 1.35
CLDND1-220ENST00000508902 ISCA1Q9BUE6 129 aa23.47■■□□□ 1.35
CLDND1-220ENST00000508902 COL4A1P02462 1669 aa23.46■■□□□ 1.35
CLDND1-220ENST00000508902 PRELPP51888 382 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms