RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 PHLDB3Q6NSJ2 640 aa13.51□□□□□ -0.25
CHD1-205ENST00000508756 GPC6Q9Y625 555 aaPredicted RBP13.51□□□□□ -0.25
CHD1-205ENST00000508756 ZNF280CQ8ND82 737 aa13.5□□□□□ -0.25
CHD1-205ENST00000508756 ZCCHC2Q9C0B9 1178 aaKnown RBP13.5□□□□□ -0.25
CHD1-205ENST00000508756 NAA30Q147X3 362 aaPredicted RBP13.49□□□□□ -0.25
CHD1-205ENST00000508756 FOXR1Q6PIV2 292 aa13.49□□□□□ -0.25
CHD1-205ENST00000508756 SUSD3Q96L08 255 aa13.49□□□□□ -0.25
CHD1-205ENST00000508756 NEUROD4Q9HD90 331 aa13.49□□□□□ -0.25
CHD1-205ENST00000508756 KLK14Q9P0G3 267 aa13.49□□□□□ -0.25
CHD1-205ENST00000508756 SEPT3Q9UH03 358 aa13.49□□□□□ -0.25
CHD1-205ENST00000508756 GAS6Q14393 721 aa13.48□□□□□ -0.25
CHD1-205ENST00000508756 RNFT1Q5M7Z0 435 aa13.48□□□□□ -0.25
CHD1-205ENST00000508756 COL26A1Q96A83 441 aa13.48□□□□□ -0.25
CHD1-205ENST00000508756 COL25A1Q9BXS0 654 aaPredicted RBP13.48□□□□□ -0.25
CHD1-205ENST00000508756 SAP130Q9H0E3 1048 aa13.48□□□□□ -0.25
CHD1-205ENST00000508756 LRFN2Q9ULH4 789 aa13.48□□□□□ -0.25
CHD1-205ENST00000508756 BNIP3LO60238 219 aa13.47□□□□□ -0.25
CHD1-205ENST00000508756 KRT76Q01546 638 aa13.47□□□□□ -0.25
CHD1-205ENST00000508756 DGKZQ13574 1117 aa13.47□□□□□ -0.25
CHD1-205ENST00000508756 COX20Q5RI15 118 aa13.47□□□□□ -0.25
CHD1-205ENST00000508756 FIGNL1Q6PIW4 674 aa13.47□□□□□ -0.25
CHD1-205ENST00000508756 ABHD17AQ96GS6 310 aa13.47□□□□□ -0.25
CHD1-205ENST00000508756 MYO19Q96H55 970 aa13.47□□□□□ -0.25
CHD1-205ENST00000508756 TRERF1Q96PN7 1200 aa13.47□□□□□ -0.25
CHD1-205ENST00000508756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.47□□□□□ -0.252e-6■■■■■ 84.9
CHD1-205ENST00000508756 ATXN7O15265 892 aaPredicted RBP13.46□□□□□ -0.25
CHD1-205ENST00000508756 PTCD1O75127 700 aaKnown RBP13.46□□□□□ -0.25
CHD1-205ENST00000508756 NDFIP2Q9NV92 336 aa13.46□□□□□ -0.25
CHD1-205ENST00000508756 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
CHD1-205ENST00000508756 PCDHGC4Q9Y5F7 938 aa13.46□□□□□ -0.25
CHD1-205ENST00000508756 DCDC2BA2VCK2 349 aa13.45□□□□□ -0.26
CHD1-205ENST00000508756 PDE4CQ08493 712 aa13.44□□□□□ -0.26
CHD1-205ENST00000508756 SAMD5Q5TGI4 173 aa13.44□□□□□ -0.26
CHD1-205ENST00000508756 C16orf46Q6P387 395 aa13.44□□□□□ -0.26
CHD1-205ENST00000508756 ANKIB1Q9P2G1 1089 aa13.43□□□□□ -0.26
CHD1-205ENST00000508756 HCN2Q9UL51 889 aa13.43□□□□□ -0.26
CHD1-205ENST00000508756 KHNYNO15037 678 aaKnown RBP13.42□□□□□ -0.26
CHD1-205ENST00000508756 CNTNAP3BQ96NU0 1288 aa13.42□□□□□ -0.26
CHD1-205ENST00000508756 CFHR5Q9BXR6 569 aa13.42□□□□□ -0.26
CHD1-205ENST00000508756 CNTNAP3Q9BZ76 1288 aa13.42□□□□□ -0.26
CHD1-205ENST00000508756 ATXN7L1Q9ULK2 861 aaPredicted RBP13.42□□□□□ -0.26
CHD1-205ENST00000508756 FAM157BP0CG42 384 aa13.41□□□□□ -0.26
CHD1-205ENST00000508756 TNP2Q05952 138 aa13.41□□□□□ -0.26
CHD1-205ENST00000508756 HIF1AQ16665 826 aa13.41□□□□□ -0.26
CHD1-205ENST00000508756 C11orf91Q3C1V1 193 aa13.41□□□□□ -0.26
CHD1-205ENST00000508756 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
CHD1-205ENST00000508756 PHF24Q9UPV7 400 aa13.41□□□□□ -0.26
CHD1-205ENST00000508756 TGFBR3LH3BV60 316 aa13.4□□□□□ -0.26
CHD1-205ENST00000508756 MAPTP10636 758 aaKnown RBP13.4□□□□□ -0.26
CHD1-205ENST00000508756 CEP63Q96MT8 703 aa13.4□□□□□ -0.26
CHD1-205ENST00000508756 TNFRSF10BO14763 440 aa13.39□□□□□ -0.27
CHD1-205ENST00000508756 EFSO43281 561 aa13.39□□□□□ -0.27
CHD1-205ENST00000508756 FGFR3P22607 806 aa13.39□□□□□ -0.27
CHD1-205ENST00000508756 TYRO3Q06418 890 aa13.39□□□□□ -0.27
CHD1-205ENST00000508756 BTLAQ7Z6A9 289 aa13.39□□□□□ -0.27
CHD1-205ENST00000508756 STRN4Q9NRL3 753 aa13.39□□□□□ -0.27
CHD1-205ENST00000508756 FAM26DQ5JW98 314 aa13.38□□□□□ -0.27
CHD1-205ENST00000508756 IFT43Q96FT9 208 aa13.38□□□□□ -0.27
CHD1-205ENST00000508756 DMGDHQ9UI17 866 aaKnown RBP13.38□□□□□ -0.27
CHD1-205ENST00000508756 CD33P20138 364 aa13.37□□□□□ -0.27
CHD1-205ENST00000508756 MX2P20592 715 aa13.37□□□□□ -0.27
CHD1-205ENST00000508756 IER5Q5VY09 327 aa13.37□□□□□ -0.27
CHD1-205ENST00000508756 GTF3C2Q8WUA4 911 aaPredicted RBP13.37□□□□□ -0.27
CHD1-205ENST00000508756 MBIPQ9NS73 344 aa13.37□□□□□ -0.27
CHD1-205ENST00000508756 CTBSQ01459 385 aa13.36□□□□□ -0.27
CHD1-205ENST00000508756 BRD7Q9NPI1 651 aa13.36□□□□□ -0.27
CHD1-205ENST00000508756 WIPF1O43516 503 aa13.35□□□□□ -0.27
CHD1-205ENST00000508756 SFSWAPQ12872 951 aaKnown RBP13.35□□□□□ -0.27
CHD1-205ENST00000508756 ETFBKMTQ8IXQ9 262 aa13.35□□□□□ -0.27
CHD1-205ENST00000508756 DNMT3AQ9Y6K1 912 aaPredicted RBP13.35□□□□□ -0.27
CHD1-205ENST00000508756 IDH3AP50213 366 aa13.34□□□□□ -0.27
CHD1-205ENST00000508756 MTMR3Q13615 1198 aa13.34□□□□□ -0.27
CHD1-205ENST00000508756 GRIN2CQ14957 1233 aa13.34□□□□□ -0.27
CHD1-205ENST00000508756 MICAL2O94851 1124 aa13.33□□□□□ -0.28
CHD1-205ENST00000508756 BRD2P25440 801 aaKnown RBP13.33□□□□□ -0.28
CHD1-205ENST00000508756 TREML1Q86YW5 311 aa13.33□□□□□ -0.28
CHD1-205ENST00000508756 HELQQ8TDG4 1101 aa13.33□□□□□ -0.28
CHD1-205ENST00000508756 IGF1RP08069 1367 aa13.32□□□□□ -0.28
CHD1-205ENST00000508756 C2CD2LO14523 706 aa13.32□□□□□ -0.28
CHD1-205ENST00000508756 SERPINB4P48594 390 aa13.32□□□□□ -0.28
CHD1-205ENST00000508756 TRAIPQ9BWF2 469 aa13.32□□□□□ -0.28
CHD1-205ENST00000508756 MARK1Q9P0L2 795 aa13.32□□□□□ -0.28
CHD1-205ENST00000508756 STIM2Q9P246 746 aa13.32□□□□□ -0.28
CHD1-205ENST00000508756 MTMR7Q9Y216 660 aa13.32□□□□□ -0.28
CHD1-205ENST00000508756 ADAMTS2O95450 1211 aa13.31□□□□□ -0.28
CHD1-205ENST00000508756 ABL1P00519 1130 aa13.31□□□□□ -0.28
CHD1-205ENST00000508756 BMP4P12644 408 aa13.31□□□□□ -0.28
CHD1-205ENST00000508756 ARID4AP29374 1257 aaPredicted RBP13.31□□□□□ -0.28
CHD1-205ENST00000508756 INPP5BP32019 993 aa13.31□□□□□ -0.28
CHD1-205ENST00000508756 ZNF211Q13398 564 aaPredicted RBP13.31□□□□□ -0.28
CHD1-205ENST00000508756 LAMC2Q13753 1193 aa13.31□□□□□ -0.28
CHD1-205ENST00000508756 ANO2Q9NQ90 1003 aa13.31□□□□□ -0.28
CHD1-205ENST00000508756 BRD1O95696 1058 aa13.3□□□□□ -0.28
CHD1-205ENST00000508756 SRSF11Q05519 484 aaKnown RBP13.3□□□□□ -0.28
CHD1-205ENST00000508756 ZBTB39O15060 712 aa13.29□□□□□ -0.28
CHD1-205ENST00000508756 GRNP28799 593 aaKnown RBP13.29□□□□□ -0.28
CHD1-205ENST00000508756 TXNDC2Q86VQ3 553 aa13.29□□□□□ -0.28
CHD1-205ENST00000508756 KCNH4Q9UQ05 1017 aa13.29□□□□□ -0.28
CHD1-205ENST00000508756 USP20Q9Y2K6 914 aa13.29□□□□□ -0.28
CHD1-205ENST00000508756 OPLAHO14841 1288 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms