RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 WDR44Q5JSH3 913 aa11.24□□□□□ -0.61
COL6A4P1-204ENST00000508169 TRIM46Q7Z4K8 759 aa11.24□□□□□ -0.61
COL6A4P1-204ENST00000508169 ETFBKMTQ8IXQ9 262 aa11.24□□□□□ -0.61
COL6A4P1-204ENST00000508169 IFT43Q96FT9 208 aa11.24□□□□□ -0.61
COL6A4P1-204ENST00000508169 RBM47A0AV96 593 aaKnown RBP11.23□□□□□ -0.61
COL6A4P1-204ENST00000508169 NRG2O14511 850 aaPredicted RBP11.23□□□□□ -0.61
COL6A4P1-204ENST00000508169 FZD6O60353 706 aa11.23□□□□□ -0.61
COL6A4P1-204ENST00000508169 BCL2L13Q9BXK5 485 aa11.23□□□□□ -0.61
COL6A4P1-204ENST00000508169 CCDC87Q9NVE4 849 aa11.23□□□□□ -0.61
COL6A4P1-204ENST00000508169 GPC6Q9Y625 555 aaPredicted RBP11.23□□□□□ -0.61
COL6A4P1-204ENST00000508169 GFRA3O60609 400 aa11.22□□□□□ -0.61
COL6A4P1-204ENST00000508169 SOS2Q07890 1332 aaPredicted RBP11.22□□□□□ -0.61
COL6A4P1-204ENST00000508169 ATCAYQ86WG3 371 aa11.22□□□□□ -0.61
COL6A4P1-204ENST00000508169 CITED4Q96RK1 184 aa11.22□□□□□ -0.61
COL6A4P1-204ENST00000508169 AXIN1O15169 862 aa11.21□□□□□ -0.61
COL6A4P1-204ENST00000508169 RHOQP17081 205 aa11.21□□□□□ -0.61
COL6A4P1-204ENST00000508169 ZAP70P43403 619 aa11.21□□□□□ -0.61
COL6A4P1-204ENST00000508169 BICDL1Q6ZP65 573 aa11.21□□□□□ -0.61
COL6A4P1-204ENST00000508169 TMC7Q7Z402 723 aa11.21□□□□□ -0.61
COL6A4P1-204ENST00000508169 TIMMDC1Q9NPL8 285 aa11.21□□□□□ -0.61
COL6A4P1-204ENST00000508169 A0A1B0GTH6 734 aa11.2□□□□□ -0.62
COL6A4P1-204ENST00000508169 FIGNL2A6NMB9 653 aa11.2□□□□□ -0.62
COL6A4P1-204ENST00000508169 ATP4AP20648 1035 aa11.2□□□□□ -0.62
COL6A4P1-204ENST00000508169 TREML1Q86YW5 311 aa11.2□□□□□ -0.62
COL6A4P1-204ENST00000508169 CRIPAKQ8N1N5 446 aa11.2□□□□□ -0.62
COL6A4P1-204ENST00000508169 TMC1Q8TDI8 760 aa11.2□□□□□ -0.62
COL6A4P1-204ENST00000508169 C7orf43Q8WVR3 580 aa11.2□□□□□ -0.62
COL6A4P1-204ENST00000508169 ZFP42Q96MM3 310 aa11.2□□□□□ -0.62
COL6A4P1-204ENST00000508169 BCS1LQ9Y276 419 aa11.2□□□□□ -0.62
COL6A4P1-204ENST00000508169 TGFBR3LH3BV60 316 aa11.19□□□□□ -0.62
COL6A4P1-204ENST00000508169 SUSD3Q96L08 255 aa11.19□□□□□ -0.62
COL6A4P1-204ENST00000508169 MZF1P28698 734 aaPredicted RBP11.18□□□□□ -0.62
COL6A4P1-204ENST00000508169 DNM1Q05193 864 aaKnown RBP11.18□□□□□ -0.62
COL6A4P1-204ENST00000508169 GIPC2Q8TF65 315 aa11.18□□□□□ -0.62
COL6A4P1-204ENST00000508169 EDEM1Q92611 657 aa11.18□□□□□ -0.62
COL6A4P1-204ENST00000508169 POLIQ9UNA4 740 aa11.18□□□□□ -0.62
COL6A4P1-204ENST00000508169 MSX1P28360 303 aa11.17□□□□□ -0.62
COL6A4P1-204ENST00000508169 PDE3BQ13370 1112 aa11.17□□□□□ -0.62
COL6A4P1-204ENST00000508169 COL19A1Q14993 1142 aa11.17□□□□□ -0.62
COL6A4P1-204ENST00000508169 ARSJQ5FYB0 599 aaPredicted RBP11.17□□□□□ -0.62
COL6A4P1-204ENST00000508169 IER5Q5VY09 327 aa11.17□□□□□ -0.62
COL6A4P1-204ENST00000508169 HSH2DQ96JZ2 352 aa11.17□□□□□ -0.62
COL6A4P1-204ENST00000508169 DMRTB1Q96MA1 342 aa11.17□□□□□ -0.62
COL6A4P1-204ENST00000508169 ANKIB1Q9P2G1 1089 aa11.17□□□□□ -0.62
COL6A4P1-204ENST00000508169 E9PSI1 815 aa11.16□□□□□ -0.62
COL6A4P1-204ENST00000508169 MICAL2O94851 1124 aa11.16□□□□□ -0.62
COL6A4P1-204ENST00000508169 ZNF16P17020 682 aaPredicted RBP11.16□□□□□ -0.62
COL6A4P1-204ENST00000508169 USP5P45974 858 aa11.16□□□□□ -0.62
COL6A4P1-204ENST00000508169 ZNF280CQ8ND82 737 aa11.16□□□□□ -0.62
COL6A4P1-204ENST00000508169 KLRG1Q96E93 195 aa11.16□□□□□ -0.62
COL6A4P1-204ENST00000508169 ZIC5Q96T25 663 aa11.16□□□□□ -0.62
COL6A4P1-204ENST00000508169 FAM129BQ96TA1 746 aa11.16□□□□□ -0.62
COL6A4P1-204ENST00000508169 NEUROD4Q9HD90 331 aa11.16□□□□□ -0.62
COL6A4P1-204ENST00000508169 FAM13BQ9NYF5 915 aa11.16□□□□□ -0.62
COL6A4P1-204ENST00000508169 DNMT3LQ9UJW3 386 aa11.16□□□□□ -0.62
COL6A4P1-204ENST00000508169 TREHO43280 583 aa11.15□□□□□ -0.62
COL6A4P1-204ENST00000508169 PDGFAP04085 211 aa11.15□□□□□ -0.62
COL6A4P1-204ENST00000508169 FBXO33Q7Z6M2 555 aa11.15□□□□□ -0.62
COL6A4P1-204ENST00000508169 PCSK2P16519 638 aa11.14□□□□□ -0.63
COL6A4P1-204ENST00000508169 LAPTM4AQ15012 233 aa11.14□□□□□ -0.63
COL6A4P1-204ENST00000508169 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.14□□□□□ -0.63
COL6A4P1-204ENST00000508169 ZNF326Q5BKZ1 582 aaKnown RBP11.14□□□□□ -0.63
COL6A4P1-204ENST00000508169 GJD3Q8N144 294 aa11.14□□□□□ -0.63
COL6A4P1-204ENST00000508169 GPR152Q8TDT2 470 aa11.14□□□□□ -0.63
COL6A4P1-204ENST00000508169 UNCXA6NJT0 531 aa11.13□□□□□ -0.63
COL6A4P1-204ENST00000508169 IDH3AP50213 366 aa11.13□□□□□ -0.63
COL6A4P1-204ENST00000508169 EAPPQ56P03 285 aaPredicted RBP11.13□□□□□ -0.63
COL6A4P1-204ENST00000508169 ATP13A2Q9NQ11 1180 aa11.13□□□□□ -0.63
COL6A4P1-204ENST00000508169 DMGDHQ9UI17 866 aaKnown RBP11.13□□□□□ -0.63
COL6A4P1-204ENST00000508169 DYRK1BQ9Y463 629 aa11.13□□□□□ -0.63
COL6A4P1-204ENST00000508169 A0A1W2PNR3 127 aa11.12□□□□□ -0.63
COL6A4P1-204ENST00000508169 GPR182O15218 404 aa11.12□□□□□ -0.63
COL6A4P1-204ENST00000508169 IGHA2P01877 340 aa11.12□□□□□ -0.63
COL6A4P1-204ENST00000508169 P4HBP07237 508 aaKnown RBP11.12□□□□□ -0.63
COL6A4P1-204ENST00000508169 FMR1Q06787 632 aaKnown RBP eCLIP11.12□□□□□ -0.63
COL6A4P1-204ENST00000508169 LRRC69Q6ZNQ3 347 aa11.12□□□□□ -0.63
COL6A4P1-204ENST00000508169 NUDT16Q96DE0 195 aaKnown RBP11.12□□□□□ -0.63
COL6A4P1-204ENST00000508169 GPAMQ9HCL2 828 aa11.12□□□□□ -0.63
COL6A4P1-204ENST00000508169 ST8SIA5O15466 376 aa11.11□□□□□ -0.63
COL6A4P1-204ENST00000508169 MAN1A2O60476 641 aa11.11□□□□□ -0.63
COL6A4P1-204ENST00000508169 ARSDP51689 593 aa11.11□□□□□ -0.63
COL6A4P1-204ENST00000508169 BTLAQ7Z6A9 289 aa11.11□□□□□ -0.63
COL6A4P1-204ENST00000508169 PIK3R5Q8WYR1 880 aa11.11□□□□□ -0.63
COL6A4P1-204ENST00000508169 CRISPLD1Q9H336 500 aa11.11□□□□□ -0.63
COL6A4P1-204ENST00000508169 AAASQ9NRG9 546 aa11.11□□□□□ -0.63
COL6A4P1-204ENST00000508169 GJA3Q9Y6H8 435 aa11.11□□□□□ -0.63
COL6A4P1-204ENST00000508169 OPLAHO14841 1288 aa11.1□□□□□ -0.63
COL6A4P1-204ENST00000508169 F11P03951 625 aa11.1□□□□□ -0.63
COL6A4P1-204ENST00000508169 RPLP1P05386 114 aaKnown RBP11.1□□□□□ -0.63
COL6A4P1-204ENST00000508169 PLCB3Q01970 1234 aa11.1□□□□□ -0.63
COL6A4P1-204ENST00000508169 EHHADHQ08426 723 aa11.1□□□□□ -0.63
COL6A4P1-204ENST00000508169 DSC3Q14574 896 aa11.1□□□□□ -0.63
COL6A4P1-204ENST00000508169 PGBD3Q8N328 593 aa11.1□□□□□ -0.63
COL6A4P1-204ENST00000508169 TTC16Q8NEE8 873 aa11.1□□□□□ -0.63
COL6A4P1-204ENST00000508169 ALKBH8Q96BT7 664 aaKnown RBP11.1□□□□□ -0.63
COL6A4P1-204ENST00000508169 GAS2L1Q99501 681 aaPredicted RBP11.1□□□□□ -0.63
COL6A4P1-204ENST00000508169 RUBCNLQ9H714 662 aa11.1□□□□□ -0.63
COL6A4P1-204ENST00000508169 INPP5BP32019 993 aa11.08□□□□□ -0.64
COL6A4P1-204ENST00000508169 MAPK8P45983 427 aa11.08□□□□□ -0.64
COL6A4P1-204ENST00000508169 TAGLNQ01995 201 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms