RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 SPTLC3Q9NUV7 552 aa16.09■□□□□ 0.17
SNCAIP-209ENST00000508017 PTPRUQ92729 1446 aa16.09■□□□□ 0.17
SNCAIP-209ENST00000508017 NWD1Q149M9 1564 aa16.09■□□□□ 0.17
SNCAIP-209ENST00000508017 LTKP29376 864 aa16.09■□□□□ 0.17
SNCAIP-209ENST00000508017 NGDNQ8NEJ9 315 aaKnown RBP16.09■□□□□ 0.17
SNCAIP-209ENST00000508017 JAKMIP1Q96N16 626 aaKnown RBP16.09■□□□□ 0.17
SNCAIP-209ENST00000508017 SLC26A8Q96RN1 970 aa16.09■□□□□ 0.17
SNCAIP-209ENST00000508017 KCNF1Q9H3M0 494 aa16.09■□□□□ 0.17
SNCAIP-209ENST00000508017 TNRQ92752 1358 aa16.08■□□□□ 0.17
SNCAIP-209ENST00000508017 USHBP1Q8N6Y0 703 aa16.08■□□□□ 0.17
SNCAIP-209ENST00000508017 ESF1Q9H501 851 aaKnown RBP16.08■□□□□ 0.17
SNCAIP-209ENST00000508017 PYCARDQ9ULZ3 195 aa16.08■□□□□ 0.17
SNCAIP-209ENST00000508017 DIP2BQ9P265 1576 aa16.08■□□□□ 0.16
SNCAIP-209ENST00000508017 PRPF40BQ6NWY9 871 aaKnown RBP16.08■□□□□ 0.16
SNCAIP-209ENST00000508017 CCDC94Q9BW85 323 aaPredicted RBP16.08■□□□□ 0.16
SNCAIP-209ENST00000508017 VPS37CA5D8V6 355 aaPredicted RBP16.07■□□□□ 0.16
SNCAIP-209ENST00000508017 ANXA1P04083 346 aa16.07■□□□□ 0.16
SNCAIP-209ENST00000508017 HOXC9P31274 260 aa16.07■□□□□ 0.16
SNCAIP-209ENST00000508017 HMGN5P82970 282 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-209ENST00000508017 NECAB1Q8N987 351 aa16.07■□□□□ 0.16
SNCAIP-209ENST00000508017 SPC24Q8NBT2 197 aa16.07■□□□□ 0.16
SNCAIP-209ENST00000508017 DIAPH3Q9NSV4 1193 aa16.07■□□□□ 0.16
SNCAIP-209ENST00000508017 PDRG1Q9NUG6 133 aa16.07■□□□□ 0.16
SNCAIP-209ENST00000508017 ATP6V1DQ9Y5K8 247 aa16.07■□□□□ 0.16
SNCAIP-209ENST00000508017 GTF2F1P35269 517 aaKnown RBP eCLIP16.07■□□□□ 0.16
SNCAIP-209ENST00000508017 COL9A3Q14050 684 aaPredicted RBP16.07■□□□□ 0.16
SNCAIP-209ENST00000508017 NLRP6P59044 892 aa16.06■□□□□ 0.16
SNCAIP-209ENST00000508017 CHPF2Q9P2E5 772 aa16.06■□□□□ 0.16
SNCAIP-209ENST00000508017 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
SNCAIP-209ENST00000508017 OS9Q13438 667 aaPredicted RBP16.06■□□□□ 0.16
SNCAIP-209ENST00000508017 ME3Q16798 604 aa16.06■□□□□ 0.16
SNCAIP-209ENST00000508017 BEND3Q5T5X7 828 aa16.06■□□□□ 0.16
SNCAIP-209ENST00000508017 SMAP1Q8IYB5 467 aaPredicted RBP16.06■□□□□ 0.16
SNCAIP-209ENST00000508017 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
SNCAIP-209ENST00000508017 CHMP3Q9Y3E7 222 aa16.06■□□□□ 0.16
SNCAIP-209ENST00000508017 VPS53Q5VIR6 699 aa16.05■□□□□ 0.16
SNCAIP-209ENST00000508017 KIAA1524Q8TCG1 905 aa16.05■□□□□ 0.16
SNCAIP-209ENST00000508017 USP42Q9H9J4 1324 aaKnown RBP16.05■□□□□ 0.16
SNCAIP-209ENST00000508017 GLRX3O76003 335 aaKnown RBP16.05■□□□□ 0.16
SNCAIP-209ENST00000508017 FAM173BQ6P4H8 233 aa16.05■□□□□ 0.16
SNCAIP-209ENST00000508017 ZSWIM6Q9HCJ5 1215 aa16.05■□□□□ 0.16
SNCAIP-209ENST00000508017 DNAAF4Q8WXU2 420 aa16.04■□□□□ 0.16
SNCAIP-209ENST00000508017 MARF1Q9Y4F3 1742 aaKnown RBP16.04■□□□□ 0.16
SNCAIP-209ENST00000508017 KCNQ3O43525 872 aa16.04■□□□□ 0.16
SNCAIP-209ENST00000508017 TTC6Q86TZ1 520 aa16.04■□□□□ 0.16
SNCAIP-209ENST00000508017 FERMT3Q86UX7 667 aa16.04■□□□□ 0.16
SNCAIP-209ENST00000508017 KIF3AQ9Y496 699 aa16.04■□□□□ 0.16
SNCAIP-209ENST00000508017 CYP46A1Q9Y6A2 500 aa16.04■□□□□ 0.16
SNCAIP-209ENST00000508017 TTC41PQ6P2S7 1318 aa16.03■□□□□ 0.16
SNCAIP-209ENST00000508017 BCL2L12Q9HB09 334 aa16.03■□□□□ 0.16
SNCAIP-209ENST00000508017 BABAM1Q9NWV8 329 aa16.03■□□□□ 0.16
SNCAIP-209ENST00000508017 TPCN1Q9ULQ1 816 aa16.03■□□□□ 0.16
SNCAIP-209ENST00000508017 PA2G4Q9UQ80 394 aaKnown RBP16.03■□□□□ 0.16
SNCAIP-209ENST00000508017 LIG1P18858 919 aa16.03■□□□□ 0.16
SNCAIP-209ENST00000508017 CAMK4Q16566 473 aa16.03■□□□□ 0.16
SNCAIP-209ENST00000508017 LGR6Q9HBX8 967 aa16.03■□□□□ 0.16
SNCAIP-209ENST00000508017 AMOTL2Q9Y2J4 779 aa16.03■□□□□ 0.16
SNCAIP-209ENST00000508017 PLEKHG1Q9ULL1 1385 aa16.03■□□□□ 0.16
SNCAIP-209ENST00000508017 DIP2AQ14689 1571 aa16.02■□□□□ 0.16
SNCAIP-209ENST00000508017 ADCY9O60503 1353 aa16.02■□□□□ 0.16
SNCAIP-209ENST00000508017 EIF4A1P60842 406 aaKnown RBP16.02■□□□□ 0.16
SNCAIP-209ENST00000508017 CDC37L1Q7L3B6 337 aa16.02■□□□□ 0.16
SNCAIP-209ENST00000508017 RUFY2Q8WXA3 655 aa16.02■□□□□ 0.16
SNCAIP-209ENST00000508017 ZSCAN31Q96LW9 406 aaPredicted RBP16.02■□□□□ 0.16
SNCAIP-209ENST00000508017 SH2B1Q9NRF2 756 aaPredicted RBP16.02■□□□□ 0.16
SNCAIP-209ENST00000508017 CCDC192P0DO97 292 aa16.02■□□□□ 0.15
SNCAIP-209ENST00000508017 NECTIN1Q15223 517 aa16.02■□□□□ 0.15
SNCAIP-209ENST00000508017 ECHDC1Q9NTX5 307 aa16.02■□□□□ 0.15
SNCAIP-209ENST00000508017 RIOK3O14730 519 aaKnown RBP16.01■□□□□ 0.15
SNCAIP-209ENST00000508017 HSP90AB4PQ58FF6 505 aa16.01■□□□□ 0.15
SNCAIP-209ENST00000508017 CLASRPQ8N2M8 674 aaKnown RBP16.01■□□□□ 0.15
SNCAIP-209ENST00000508017 KCNB2Q92953 911 aa16.01■□□□□ 0.15
SNCAIP-209ENST00000508017 FAM227BQ96M60 508 aa16.01■□□□□ 0.15
SNCAIP-209ENST00000508017 TCEANC2Q96MN5 208 aa16.01■□□□□ 0.15
SNCAIP-209ENST00000508017 TM6SF1Q9BZW5 370 aa16.01■□□□□ 0.15
SNCAIP-209ENST00000508017 RBM8AQ9Y5S9 174 aaKnown RBP16.01■□□□□ 0.15
SNCAIP-209ENST00000508017 CCDC171Q6TFL3 1326 aa16.01■□□□□ 0.15
SNCAIP-209ENST00000508017 LARP1BQ659C4 914 aaKnown RBP16■□□□□ 0.15
SNCAIP-209ENST00000508017 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16■□□□□ 0.15
SNCAIP-209ENST00000508017 SETD1BQ9UPS6 1966 aaKnown RBP16■□□□□ 0.15
SNCAIP-209ENST00000508017 PTGS1P23219 599 aa16■□□□□ 0.15
SNCAIP-209ENST00000508017 CBX1P83916 185 aa16■□□□□ 0.15
SNCAIP-209ENST00000508017 CREB3L3Q68CJ9 461 aa16■□□□□ 0.15
SNCAIP-209ENST00000508017 LUZP1Q86V48 1076 aa16■□□□□ 0.15
SNCAIP-209ENST00000508017 MRVI1Q9Y6F6 885 aa16■□□□□ 0.15
SNCAIP-209ENST00000508017 ATP2B3Q16720 1220 aa15.99■□□□□ 0.15
SNCAIP-209ENST00000508017 PPP4R3BQ5MIZ7 849 aa15.99■□□□□ 0.15
SNCAIP-209ENST00000508017 TAF6LQ9Y6J9 622 aa15.99■□□□□ 0.15
SNCAIP-209ENST00000508017 CHD2O14647 1828 aaKnown RBP15.99■□□□□ 0.15
SNCAIP-209ENST00000508017 CEMIPQ8WUJ3 1361 aa15.99■□□□□ 0.15
SNCAIP-209ENST00000508017 TYRO3Q06418 890 aa15.99■□□□□ 0.15
SNCAIP-209ENST00000508017 CKAP2LQ8IYA6 745 aa15.99■□□□□ 0.15
SNCAIP-209ENST00000508017 FAM200AQ8TCP9 573 aa15.99■□□□□ 0.15
SNCAIP-209ENST00000508017 NUP62CLQ9H1M0 184 aa15.99■□□□□ 0.15
SNCAIP-209ENST00000508017 KDM3BQ7LBC6 1761 aa15.99■□□□□ 0.15
SNCAIP-209ENST00000508017 IFIT2P09913 472 aaKnown RBP15.98■□□□□ 0.15
SNCAIP-209ENST00000508017 KCNJ4P48050 445 aa15.98■□□□□ 0.15
SNCAIP-209ENST00000508017 KRT85P78386 507 aa15.98■□□□□ 0.15
SNCAIP-209ENST00000508017 NMIQ13287 307 aaPredicted RBP15.98■□□□□ 0.15
SNCAIP-209ENST00000508017 MAP3K11Q16584 847 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms