RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ARHGAP4P98171 946 aa6.14□□□□□ -1.43
LSM6-205ENST00000507449 CCDC27Q2M243 656 aa6.14□□□□□ -1.43
LSM6-205ENST00000507449 SLC27A3Q5K4L6 730 aa6.14□□□□□ -1.43
LSM6-205ENST00000507449 TMEM214Q6NUQ4 689 aaKnown RBP6.14□□□□□ -1.43
LSM6-205ENST00000507449 C16orf46Q6P387 395 aa6.14□□□□□ -1.43
LSM6-205ENST00000507449 SVOPQ8N4V2 548 aa6.14□□□□□ -1.43
LSM6-205ENST00000507449 C7orf43Q8WVR3 580 aa6.14□□□□□ -1.43
LSM6-205ENST00000507449 KLRG1Q96E93 195 aa6.14□□□□□ -1.43
LSM6-205ENST00000507449 ZFP42Q96MM3 310 aa6.14□□□□□ -1.43
LSM6-205ENST00000507449 HCN4Q9Y3Q4 1203 aa6.14□□□□□ -1.43
LSM6-205ENST00000507449 NPR3P17342 541 aa6.13□□□□□ -1.43
LSM6-205ENST00000507449 PLA2G4AP47712 749 aa6.13□□□□□ -1.43
LSM6-205ENST00000507449 FKBP4Q02790 459 aaKnown RBP eCLIP6.13□□□□□ -1.43
LSM6-205ENST00000507449 DNAJC14Q6Y2X3 702 aaPredicted RBP6.13□□□□□ -1.43
LSM6-205ENST00000507449 ALDH16A1Q8IZ83 802 aa6.13□□□□□ -1.43
LSM6-205ENST00000507449 GALNT6Q8NCL4 622 aa6.13□□□□□ -1.43
LSM6-205ENST00000507449 VTI1AQ96AJ9 217 aa6.13□□□□□ -1.43
LSM6-205ENST00000507449 MYO19Q96H55 970 aa6.13□□□□□ -1.43
LSM6-205ENST00000507449 NGLY1Q96IV0 654 aa6.13□□□□□ -1.43
LSM6-205ENST00000507449 NIFKQ9BYG3 293 aaKnown RBP6.13□□□□□ -1.43
LSM6-205ENST00000507449 ZNF232Q9UNY5 417 aa6.13□□□□□ -1.43
LSM6-205ENST00000507449 SOS2Q07890 1332 aaPredicted RBP6.13□□□□□ -1.43
LSM6-205ENST00000507449 UPP2O95045 317 aa6.12□□□□□ -1.43
LSM6-205ENST00000507449 PHKA2P46019 1235 aa6.12□□□□□ -1.43
LSM6-205ENST00000507449 POU4F2Q12837 409 aa6.12□□□□□ -1.43
LSM6-205ENST00000507449 SF3B2Q13435 895 aaKnown RBP6.12□□□□□ -1.43
LSM6-205ENST00000507449 PRICKLE2Q7Z3G6 844 aa6.12□□□□□ -1.43
LSM6-205ENST00000507449 GLYCTKQ8IVS8 523 aa6.12□□□□□ -1.43
LSM6-205ENST00000507449 PHACTR1Q9C0D0 580 aa6.12□□□□□ -1.43
LSM6-205ENST00000507449 TTLL8A6PVC2 850 aa6.11□□□□□ -1.43
LSM6-205ENST00000507449 MPSTP25325 297 aa6.11□□□□□ -1.43
LSM6-205ENST00000507449 GNASQ5JWF2 1037 aa6.11□□□□□ -1.43
LSM6-205ENST00000507449 NBPF10Q6P3W6 841 aaKnown RBP6.11□□□□□ -1.43
LSM6-205ENST00000507449 Q8N3U1 123 aa6.11□□□□□ -1.43
LSM6-205ENST00000507449 BIN2Q9UBW5 565 aaPredicted RBP6.11□□□□□ -1.43
LSM6-205ENST00000507449 BCS1LQ9Y276 419 aa6.11□□□□□ -1.43
LSM6-205ENST00000507449 CHMP3Q9Y3E7 222 aa6.11□□□□□ -1.43
LSM6-205ENST00000507449 FIGNL2A6NMB9 653 aa6.1□□□□□ -1.43
LSM6-205ENST00000507449 ZBTB39O15060 712 aa6.1□□□□□ -1.43
LSM6-205ENST00000507449 RHOQP17081 205 aa6.1□□□□□ -1.43
LSM6-205ENST00000507449 ATP4AP20648 1035 aa6.1□□□□□ -1.43
LSM6-205ENST00000507449 DGKZQ13574 1117 aa6.1□□□□□ -1.43
LSM6-205ENST00000507449 RTN1Q16799 776 aa6.1□□□□□ -1.43
LSM6-205ENST00000507449 C1orf53Q5VUE5 145 aa6.1□□□□□ -1.43
LSM6-205ENST00000507449 LYSMD3Q7Z3D4 306 aa6.1□□□□□ -1.43
LSM6-205ENST00000507449 ETFBKMTQ8IXQ9 262 aa6.1□□□□□ -1.43
LSM6-205ENST00000507449 FOXD4L4Q8WXT5 416 aaPredicted RBP6.1□□□□□ -1.43
LSM6-205ENST00000507449 KLK14Q9P0G3 267 aa6.1□□□□□ -1.43
LSM6-205ENST00000507449 DNMT3LQ9UJW3 386 aa6.1□□□□□ -1.43
LSM6-205ENST00000507449 K7ELQ4 463 aaPredicted RBP6.09□□□□□ -1.43
LSM6-205ENST00000507449 MAN1A2O60476 641 aa6.09□□□□□ -1.43
LSM6-205ENST00000507449 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.09□□□□□ -1.43
LSM6-205ENST00000507449 ZDHHC3Q9NYG2 299 aa6.09□□□□□ -1.43
LSM6-205ENST00000507449 STIM2Q9P246 746 aa6.09□□□□□ -1.43
LSM6-205ENST00000507449 FZD6O60353 706 aa6.08□□□□□ -1.44
LSM6-205ENST00000507449 FAM13AO94988 1023 aa6.08□□□□□ -1.44
LSM6-205ENST00000507449 GTF2E1P29083 439 aaPredicted RBP6.08□□□□□ -1.44
LSM6-205ENST00000507449 EIF1AXP47813 144 aaKnown RBP6.08□□□□□ -1.44
LSM6-205ENST00000507449 WDR44Q5JSH3 913 aa6.08□□□□□ -1.44
LSM6-205ENST00000507449 ATCAYQ86WG3 371 aa6.08□□□□□ -1.44
LSM6-205ENST00000507449 SENP3-EIF4A1A0A087X0R7 540 aa6.07□□□□□ -1.44
LSM6-205ENST00000507449 SOBPA7XYQ1 873 aa6.07□□□□□ -1.44
LSM6-205ENST00000507449 C11orf91Q3C1V1 193 aa6.07□□□□□ -1.44
LSM6-205ENST00000507449 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
LSM6-205ENST00000507449 ZNF280CQ8ND82 737 aa6.07□□□□□ -1.44
LSM6-205ENST00000507449 AIDAQ96BJ3 306 aa6.07□□□□□ -1.44
LSM6-205ENST00000507449 CNTNAP3BQ96NU0 1288 aa6.07□□□□□ -1.44
LSM6-205ENST00000507449 CNTNAP3Q9BZ76 1288 aa6.07□□□□□ -1.44
LSM6-205ENST00000507449 MSX1P28360 303 aa6.06□□□□□ -1.44
LSM6-205ENST00000507449 NBPF1Q3BBV0 1214 aa6.06□□□□□ -1.44
LSM6-205ENST00000507449 RHPN1Q8TCX5 695 aa6.06□□□□□ -1.44
LSM6-205ENST00000507449 ZNF428Q96B54 188 aa6.06□□□□□ -1.44
LSM6-205ENST00000507449 IFT43Q96FT9 208 aa6.06□□□□□ -1.44
LSM6-205ENST00000507449 HSH2DQ96JZ2 352 aa6.06□□□□□ -1.44
LSM6-205ENST00000507449 TIMMDC1Q9NPL8 285 aa6.06□□□□□ -1.44
LSM6-205ENST00000507449 CCDC87Q9NVE4 849 aa6.06□□□□□ -1.44
LSM6-205ENST00000507449 DMGDHQ9UI17 866 aaKnown RBP6.06□□□□□ -1.44
LSM6-205ENST00000507449 DCTN4Q9UJW0 460 aa6.06□□□□□ -1.44
LSM6-205ENST00000507449 A0A1B0GTH6 734 aa6.05□□□□□ -1.44
LSM6-205ENST00000507449 PHF20L1A8MW92 1017 aa6.05□□□□□ -1.44
LSM6-205ENST00000507449 PPFIA3O75145 1194 aa6.05□□□□□ -1.44
LSM6-205ENST00000507449 IGHA2P01877 340 aa6.05□□□□□ -1.44
LSM6-205ENST00000507449 BRD2P25440 801 aaKnown RBP6.05□□□□□ -1.44
LSM6-205ENST00000507449 MAPK1P28482 360 aa6.05□□□□□ -1.44
LSM6-205ENST00000507449 NPAS4Q8IUM7 802 aa6.05□□□□□ -1.44
LSM6-205ENST00000507449 SUSD3Q96L08 255 aa6.05□□□□□ -1.44
LSM6-205ENST00000507449 ZIC5Q96T25 663 aa6.05□□□□□ -1.44
LSM6-205ENST00000507449 SPOCK3Q9BQ16 436 aa6.05□□□□□ -1.44
LSM6-205ENST00000507449 ANKRD33BA6NCL7 494 aa6.04□□□□□ -1.44
LSM6-205ENST00000507449 THBS1P07996 1170 aa6.04□□□□□ -1.44
LSM6-205ENST00000507449 MAP3K10Q02779 954 aa6.04□□□□□ -1.44
LSM6-205ENST00000507449 ZNF385CQ66K41 422 aaPredicted RBP6.04□□□□□ -1.44
LSM6-205ENST00000507449 TREML1Q86YW5 311 aa6.04□□□□□ -1.44
LSM6-205ENST00000507449 ABTB2Q8N961 1025 aa6.04□□□□□ -1.44
LSM6-205ENST00000507449 ASB16Q96NS5 453 aa6.04□□□□□ -1.44
LSM6-205ENST00000507449 RBCK1Q9BYM8 510 aa6.04□□□□□ -1.44
LSM6-205ENST00000507449 TGFBR3LH3BV60 316 aa6.03□□□□□ -1.44
LSM6-205ENST00000507449 TATP17735 454 aaPredicted RBP6.03□□□□□ -1.44
LSM6-205ENST00000507449 GRNP28799 593 aaKnown RBP6.03□□□□□ -1.44
LSM6-205ENST00000507449 ZAP70P43403 619 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms