RNA–Protein interactions for RNA: ENST00000507395.1

SFXN1-207, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-207ENST00000507395 RUNDC1Q96C34 613 aa23.28■■□□□ 1.32
SFXN1-207ENST00000507395 PDZRN3Q9UPQ7 1066 aa23.28■■□□□ 1.32
SFXN1-207ENST00000507395 LRP10Q7Z4F1 713 aa23.27■■□□□ 1.32
SFXN1-207ENST00000507395 TSPYL4Q9UJ04 414 aa23.27■■□□□ 1.32
SFXN1-207ENST00000507395 ZNF652Q9Y2D9 606 aa23.26■■□□□ 1.31
SFXN1-207ENST00000507395 NUP98P52948 1817 aa23.25■■□□□ 1.31
SFXN1-207ENST00000507395 KLRG2A4D1S0 409 aaPredicted RBP23.25■■□□□ 1.31
SFXN1-207ENST00000507395 SRGNP10124 158 aa23.25■■□□□ 1.31
SFXN1-207ENST00000507395 RASSF7Q02833 373 aa23.25■■□□□ 1.31
SFXN1-207ENST00000507395 LMOD3Q0VAK6 560 aa23.25■■□□□ 1.31
SFXN1-207ENST00000507395 PDIA6Q15084 440 aa23.25■■□□□ 1.31
SFXN1-207ENST00000507395 TTLL7Q6ZT98 887 aa23.25■■□□□ 1.31
SFXN1-207ENST00000507395 ERVV-1B6SEH8 477 aa23.24■■□□□ 1.31
SFXN1-207ENST00000507395 NFKBIEO00221 500 aa23.24■■□□□ 1.31
SFXN1-207ENST00000507395 WDR43Q15061 677 aaKnown RBP eCLIP23.24■■□□□ 1.31
SFXN1-207ENST00000507395 NIP7Q9Y221 180 aaKnown RBP eCLIP23.24■■□□□ 1.31
SFXN1-207ENST00000507395 ERBB4Q15303 1308 aa23.24■■□□□ 1.31
SFXN1-207ENST00000507395 ARFGEF2Q9Y6D5 1785 aa23.23■■□□□ 1.31
SFXN1-207ENST00000507395 CHL1O00533 1208 aa23.23■■□□□ 1.31
SFXN1-207ENST00000507395 ST5P78524 1137 aa23.23■■□□□ 1.31
SFXN1-207ENST00000507395 NEUROD2Q15784 382 aa23.23■■□□□ 1.31
SFXN1-207ENST00000507395 NBPF5PQ86XG9 351 aaPredicted RBP23.23■■□□□ 1.31
SFXN1-207ENST00000507395 RNF181Q9P0P0 153 aa23.23■■□□□ 1.31
SFXN1-207ENST00000507395 SLX4Q8IY92 1834 aa23.23■■□□□ 1.31
SFXN1-207ENST00000507395 MAP3K15Q6ZN16 1313 aa23.23■■□□□ 1.31
SFXN1-207ENST00000507395 CEP350Q5VT06 3117 aa23.23■■□□□ 1.31
SFXN1-207ENST00000507395 MYL6BP14649 208 aa23.22■■□□□ 1.31
SFXN1-207ENST00000507395 NGEFQ8N5V2 710 aa23.22■■□□□ 1.31
SFXN1-207ENST00000507395 ZNF622Q969S3 477 aaKnown RBP eCLIP23.22■■□□□ 1.312e-15■□□□□ 10.5
SFXN1-207ENST00000507395 FER1L6Q2WGJ9 1857 aa23.22■■□□□ 1.31
SFXN1-207ENST00000507395 SENP3-EIF4A1A0A087X0R7 540 aa23.21■■□□□ 1.31
SFXN1-207ENST00000507395 STYK1Q6J9G0 422 aa23.21■■□□□ 1.31
SFXN1-207ENST00000507395 TPTE2Q6XPS3 522 aa23.2■■□□□ 1.3
SFXN1-207ENST00000507395 NMRK2Q9NPI5 230 aa23.2■■□□□ 1.3
SFXN1-207ENST00000507395 C21orf2O43822 256 aa23.19■■□□□ 1.3
SFXN1-207ENST00000507395 ZEB1P37275 1124 aaPredicted RBP23.19■■□□□ 1.3
SFXN1-207ENST00000507395 PROSER3Q2NL68 480 aa23.19■■□□□ 1.3
SFXN1-207ENST00000507395 C7orf43Q8WVR3 580 aa23.19■■□□□ 1.3
SFXN1-207ENST00000507395 MASTLQ96GX5 879 aa23.19■■□□□ 1.3
SFXN1-207ENST00000507395 CACNA1SQ13698 1873 aa23.19■■□□□ 1.3
SFXN1-207ENST00000507395 CCDC88AQ3V6T2 1871 aa23.19■■□□□ 1.3
SFXN1-207ENST00000507395 TNRC6CQ9HCJ0 1690 aaKnown RBP23.19■■□□□ 1.3
SFXN1-207ENST00000507395 UBN2Q6ZU65 1347 aa23.18■■□□□ 1.3
SFXN1-207ENST00000507395 LMNB1P20700 586 aa23.18■■□□□ 1.3
SFXN1-207ENST00000507395 KRT24Q2M2I5 525 aa23.18■■□□□ 1.3
SFXN1-207ENST00000507395 CCDC184Q52MB2 194 aa23.17■■□□□ 1.3
SFXN1-207ENST00000507395 ZNF34Q8IZ26 560 aa23.17■■□□□ 1.3
SFXN1-207ENST00000507395 CNKSR1Q969H4 720 aa23.17■■□□□ 1.3
SFXN1-207ENST00000507395 ZBTB3Q9H5J0 574 aa23.17■■□□□ 1.3
SFXN1-207ENST00000507395 ZC3H4Q9UPT8 1303 aaKnown RBP23.16■■□□□ 1.3
SFXN1-207ENST00000507395 FAM177BA6PVY3 158 aa23.16■■□□□ 1.3
SFXN1-207ENST00000507395 NPHP1O15259 732 aa23.16■■□□□ 1.3
SFXN1-207ENST00000507395 ANXA1P04083 346 aa23.16■■□□□ 1.3
SFXN1-207ENST00000507395 EIF2S2P20042 333 aaKnown RBP23.16■■□□□ 1.3
SFXN1-207ENST00000507395 PRPF40BQ6NWY9 871 aaKnown RBP23.16■■□□□ 1.3
SFXN1-207ENST00000507395 GIGYF2Q6Y7W6 1299 aaKnown RBP23.16■■□□□ 1.3
SFXN1-207ENST00000507395 ABCC12Q96J65 1359 aa23.15■■□□□ 1.3
SFXN1-207ENST00000507395 KIF6Q6ZMV9 814 aa23.15■■□□□ 1.3
SFXN1-207ENST00000507395 ZNF219Q9P2Y4 722 aaPredicted RBP23.15■■□□□ 1.3
SFXN1-207ENST00000507395 TIAM2Q8IVF5 1701 aa23.15■■□□□ 1.3
SFXN1-207ENST00000507395 IBTKQ9P2D0 1353 aaPredicted RBP23.14■■□□□ 1.3
SFXN1-207ENST00000507395 LTBP3Q9NS15 1303 aa23.14■■□□□ 1.3
SFXN1-207ENST00000507395 ZNF853P0CG23 659 aa23.14■■□□□ 1.29
SFXN1-207ENST00000507395 NPR1P16066 1061 aa23.14■■□□□ 1.29
SFXN1-207ENST00000507395 SUSD4Q5VX71 490 aa23.14■■□□□ 1.29
SFXN1-207ENST00000507395 RIC1Q4ADV7 1423 aa23.14■■□□□ 1.29
SFXN1-207ENST00000507395 DICER1Q9UPY3 1922 aaKnown RBP23.14■■□□□ 1.29
SFXN1-207ENST00000507395 APAF1O14727 1248 aa23.13■■□□□ 1.29
SFXN1-207ENST00000507395 CRY2Q49AN0 593 aa23.13■■□□□ 1.29
SFXN1-207ENST00000507395 NUTM1Q86Y26 1132 aa23.13■■□□□ 1.29
SFXN1-207ENST00000507395 CFAP44Q96MT7 982 aa23.13■■□□□ 1.29
SFXN1-207ENST00000507395 TOMM70O94826 608 aa23.12■■□□□ 1.29
SFXN1-207ENST00000507395 NTSR2O95665 410 aa23.12■■□□□ 1.29
SFXN1-207ENST00000507395 GPTP24298 496 aa23.12■■□□□ 1.29
SFXN1-207ENST00000507395 ERFEQ4G0M1 354 aa23.12■■□□□ 1.29
SFXN1-207ENST00000507395 NYXQ9GZU5 481 aa23.12■■□□□ 1.29
SFXN1-207ENST00000507395 HSPA6P17066 643 aa23.11■■□□□ 1.29
SFXN1-207ENST00000507395 DDX21Q9NR30 783 aaKnown RBP eCLIP23.11■■□□□ 1.29
SFXN1-207ENST00000507395 LAS1LQ9Y4W2 734 aaKnown RBP23.11■■□□□ 1.29
SFXN1-207ENST00000507395 KDM2BQ8NHM5 1336 aa23.1■■□□□ 1.29
SFXN1-207ENST00000507395 SNED1Q8TER0 1413 aa23.1■■□□□ 1.29
SFXN1-207ENST00000507395 GLTPD2A6NH11 291 aa23.1■■□□□ 1.29
SFXN1-207ENST00000507395 NECTIN2Q92692 538 aa23.1■■□□□ 1.29
SFXN1-207ENST00000507395 HOXB7P09629 217 aa23.09■■□□□ 1.29
SFXN1-207ENST00000507395 COPS6Q7L5N1 327 aa23.09■■□□□ 1.29
SFXN1-207ENST00000507395 RRAGCQ9HB90 399 aa23.09■■□□□ 1.29
SFXN1-207ENST00000507395 MBIPQ9NS73 344 aa23.09■■□□□ 1.29
SFXN1-207ENST00000507395 ANKRD36CQ5JPF3 1778 aa23.09■■□□□ 1.29
SFXN1-207ENST00000507395 OLFM4Q6UX06 510 aa23.08■■□□□ 1.29
SFXN1-207ENST00000507395 XAGE3Q8WTP9 111 aa23.08■■□□□ 1.29
SFXN1-207ENST00000507395 TAOK3Q9H2K8 898 aa23.08■■□□□ 1.29
SFXN1-207ENST00000507395 ZNF316A6NFI3 1004 aaPredicted RBP23.07■■□□□ 1.28
SFXN1-207ENST00000507395 GTF2E1P29083 439 aaPredicted RBP23.07■■□□□ 1.28
SFXN1-207ENST00000507395 SOGA3Q5TF21 947 aa23.07■■□□□ 1.28
SFXN1-207ENST00000507395 C3orf67Q6ZVT6 689 aa23.07■■□□□ 1.28
SFXN1-207ENST00000507395 CHPF2Q9P2E5 772 aa23.07■■□□□ 1.28
SFXN1-207ENST00000507395 POTECB2RU33 542 aa23.06■■□□□ 1.28
SFXN1-207ENST00000507395 HOXA10P31260 410 aaPredicted RBP23.06■■□□□ 1.28
SFXN1-207ENST00000507395 PARP10Q53GL7 1025 aa23.06■■□□□ 1.28
SFXN1-207ENST00000507395 RBM46Q8TBY0 533 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms