RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	TPM2	P07951	284 aa		6.67	□□□□□ -1.34
TUSC3-205	ENST00000507316	MCC	P23508	829 aa		6.67	□□□□□ -1.34
TUSC3-205	ENST00000507316	SET	Q01105	290 aa	Predicted RBP	6.67	□□□□□ -1.34
TUSC3-205	ENST00000507316	TICAM2	Q86XR7	235 aa		6.67	□□□□□ -1.34
TUSC3-205	ENST00000507316	LOC105371045	A0A1W2PR82	267 aa		6.66	□□□□□ -1.34
TUSC3-205	ENST00000507316	THBS1	P07996	1170 aa		6.66	□□□□□ -1.34
TUSC3-205	ENST00000507316	GPC1	P35052	558 aa		6.66	□□□□□ -1.34
TUSC3-205	ENST00000507316	OXLD1	Q5BKU9	147 aa		6.66	□□□□□ -1.34
TUSC3-205	ENST00000507316	UTP14C	Q5TAP6	766 aa	Known RBP	6.66	□□□□□ -1.34
TUSC3-205	ENST00000507316	SMAP1	Q8IYB5	467 aa	Predicted RBP	6.66	□□□□□ -1.34
TUSC3-205	ENST00000507316	OSBPL3	Q9H4L5	887 aa		6.66	□□□□□ -1.34
TUSC3-205	ENST00000507316	PRDM4	Q9UKN5	801 aa		6.66	□□□□□ -1.34
TUSC3-205	ENST00000507316	DOLK	Q9UPQ8	538 aa		6.66	□□□□□ -1.34
TUSC3-205	ENST00000507316	GTF2E1	P29083	439 aa	Predicted RBP	6.65	□□□□□ -1.34
TUSC3-205	ENST00000507316	CLN3	Q13286	438 aa		6.65	□□□□□ -1.34
TUSC3-205	ENST00000507316	ZNF622	Q969S3	477 aa	Known RBP eCLIP	6.65	□□□□□ -1.34
TUSC3-205	ENST00000507316	CCDC85A	Q96PX6	553 aa	Predicted RBP	6.65	□□□□□ -1.34
TUSC3-205	ENST00000507316	CDCA7	Q9BWT1	371 aa	Predicted RBP	6.65	□□□□□ -1.34
TUSC3-205	ENST00000507316	PCMTD2	Q9NV79	361 aa		6.65	□□□□□ -1.34
TUSC3-205	ENST00000507316	RNF112	Q9ULX5	631 aa		6.65	□□□□□ -1.34
TUSC3-205	ENST00000507316	GOLGA6L3	A6NEY3	463 aa		6.64	□□□□□ -1.35
TUSC3-205	ENST00000507316	NEURL1B	A8MQ27	555 aa		6.64	□□□□□ -1.35
TUSC3-205	ENST00000507316	F11	P03951	625 aa		6.64	□□□□□ -1.35
TUSC3-205	ENST00000507316	SEMA3F	Q13275	785 aa		6.64	□□□□□ -1.35
TUSC3-205	ENST00000507316	IRF5	Q13568	498 aa		6.64	□□□□□ -1.35
TUSC3-205	ENST00000507316	WASHC4	Q2M389	1173 aa		6.64	□□□□□ -1.35
TUSC3-205	ENST00000507316	PRRT3	Q5FWE3	981 aa		6.64	□□□□□ -1.35
TUSC3-205	ENST00000507316	CNKSR1	Q969H4	720 aa		6.64	□□□□□ -1.35
TUSC3-205	ENST00000507316		A6NJR5	290 aa		6.63	□□□□□ -1.35
TUSC3-205	ENST00000507316	TRAK2	O60296	914 aa		6.63	□□□□□ -1.35
TUSC3-205	ENST00000507316	GNRH1	P01148	92 aa		6.63	□□□□□ -1.35
TUSC3-205	ENST00000507316	USP4	Q13107	963 aa		6.63	□□□□□ -1.35
TUSC3-205	ENST00000507316	MCM6	Q14566	821 aa		6.63	□□□□□ -1.35
TUSC3-205	ENST00000507316	WWC1	Q8IX03	1113 aa		6.63	□□□□□ -1.35
TUSC3-205	ENST00000507316	PUS7	Q96PZ0	661 aa	Known RBP	6.63	□□□□□ -1.35
TUSC3-205	ENST00000507316	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	6.63	□□□□□ -1.35
TUSC3-205	ENST00000507316	EEA1	Q15075	1411 aa		6.62	□□□□□ -1.35
TUSC3-205	ENST00000507316	KIF20A	O95235	890 aa		6.62	□□□□□ -1.35
TUSC3-205	ENST00000507316	UBTF	P17480	764 aa	Known RBP	6.62	□□□□□ -1.35
TUSC3-205	ENST00000507316	TERF1	P54274	439 aa		6.62	□□□□□ -1.35
TUSC3-205	ENST00000507316	ESCO1	Q5FWF5	840 aa		6.62	□□□□□ -1.35
TUSC3-205	ENST00000507316	TAS1R3	Q7RTX0	852 aa		6.62	□□□□□ -1.35
TUSC3-205	ENST00000507316	SIRT1	Q96EB6	747 aa		6.62	□□□□□ -1.35
TUSC3-205	ENST00000507316	TIMMDC1	Q9NPL8	285 aa		6.62	□□□□□ -1.35
TUSC3-205	ENST00000507316	WASL	O00401	505 aa	Predicted RBP	6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	RAD21	O60216	631 aa		6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	PHKA2	P46019	1235 aa		6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	CTBS	Q01459	385 aa		6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	CENPC	Q03188	943 aa		6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	TSGA10IP	Q3SY00	556 aa		6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	L1TD1	Q5T7N2	865 aa	Known RBP	6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	TMEM214	Q6NUQ4	689 aa	Known RBP	6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	NBPF10	Q6P3W6	841 aa	Known RBP	6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	NBPF15	Q8N660	670 aa		6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	CEP120	Q8N960	986 aa		6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	ESYT1	Q9BSJ8	1104 aa		6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	GRIP2	Q9C0E4	1043 aa		6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	PNN	Q9H307	717 aa	Known RBP	6.61	□□□□□ -1.35
TUSC3-205	ENST00000507316	IL2RA	P01589	272 aa		6.6	□□□□□ -1.35
TUSC3-205	ENST00000507316	MMP14	P50281	582 aa		6.6	□□□□□ -1.35
TUSC3-205	ENST00000507316	GNAS	Q5JWF2	1037 aa		6.6	□□□□□ -1.35
TUSC3-205	ENST00000507316	SPDYE3	A6NKU9	549 aa		6.59	□□□□□ -1.35
TUSC3-205	ENST00000507316	ARAF	P10398	606 aa		6.59	□□□□□ -1.35
TUSC3-205	ENST00000507316	SLC20A2	Q08357	652 aa		6.59	□□□□□ -1.35
TUSC3-205	ENST00000507316	LCE5A	Q5TCM9	118 aa		6.59	□□□□□ -1.35
TUSC3-205	ENST00000507316	NACC1	Q96RE7	527 aa		6.59	□□□□□ -1.35
TUSC3-205	ENST00000507316	PLCD4	Q9BRC7	762 aa		6.59	□□□□□ -1.35
TUSC3-205	ENST00000507316	CHMP4B	Q9H444	224 aa	Known RBP	6.59	□□□□□ -1.35
TUSC3-205	ENST00000507316	C1orf115	Q9H7X2	142 aa		6.59	□□□□□ -1.35
TUSC3-205	ENST00000507316	GPAM	Q9HCL2	828 aa		6.59	□□□□□ -1.35
TUSC3-205	ENST00000507316	PPP4R2	Q9NY27	417 aa		6.59	□□□□□ -1.35
TUSC3-205	ENST00000507316	SPATA31C2	B4DYI2	1134 aa		6.58	□□□□□ -1.36
TUSC3-205	ENST00000507316	FAM229A	H3BQW9	127 aa		6.58	□□□□□ -1.36
TUSC3-205	ENST00000507316	STAU1	O95793	577 aa	Known RBP	6.58	□□□□□ -1.36
TUSC3-205	ENST00000507316	FGFR3	P22607	806 aa		6.58	□□□□□ -1.36
TUSC3-205	ENST00000507316	SOX11	P35716	441 aa		6.58	□□□□□ -1.36
TUSC3-205	ENST00000507316	TLR1	Q15399	786 aa		6.58	□□□□□ -1.36
TUSC3-205	ENST00000507316	PHTF2	Q8N3S3	785 aa		6.58	□□□□□ -1.36
TUSC3-205	ENST00000507316	PLPP7	Q8NBV4	271 aa		6.58	□□□□□ -1.36
TUSC3-205	ENST00000507316	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	6.58	□□□□□ -1.36
TUSC3-205	ENST00000507316	COG6	Q9Y2V7	657 aa		6.58	□□□□□ -1.36
TUSC3-205	ENST00000507316	IRX3	P78415	501 aa	Predicted RBP	6.57	□□□□□ -1.36
TUSC3-205	ENST00000507316	UBAP2L	Q14157	1087 aa	Known RBP	6.57	□□□□□ -1.36
TUSC3-205	ENST00000507316	GRIK4	Q16099	956 aa		6.57	□□□□□ -1.36
TUSC3-205	ENST00000507316	MAP7D1	Q3KQU3	841 aa		6.57	□□□□□ -1.36
TUSC3-205	ENST00000507316	SECISBP2L	Q93073	1101 aa	Known RBP	6.57	□□□□□ -1.36
TUSC3-205	ENST00000507316	ABHD17A	Q96GS6	310 aa		6.57	□□□□□ -1.36
TUSC3-205	ENST00000507316	PSMD1	Q99460	953 aa		6.57	□□□□□ -1.36
TUSC3-205	ENST00000507316	ETNK1	Q9HBU6	452 aa		6.57	□□□□□ -1.36
TUSC3-205	ENST00000507316	CSB-PGBD3	P0DP91	1061 aa		6.56	□□□□□ -1.36
TUSC3-205	ENST00000507316	WDR44	Q5JSH3	913 aa		6.56	□□□□□ -1.36
TUSC3-205	ENST00000507316	PGBD3	Q8N328	593 aa		6.56	□□□□□ -1.36
TUSC3-205	ENST00000507316	TP53INP1	Q96A56	240 aa		6.56	□□□□□ -1.36
TUSC3-205	ENST00000507316	XAGE2	Q96GT9	111 aa		6.56	□□□□□ -1.36
TUSC3-205	ENST00000507316	OAS3	Q9Y6K5	1087 aa	Known RBP	6.56	□□□□□ -1.36
TUSC3-205	ENST00000507316		A0A1B0GTH6	734 aa		6.55	□□□□□ -1.36
TUSC3-205	ENST00000507316	CCER2	I3L3R5	266 aa		6.55	□□□□□ -1.36
TUSC3-205	ENST00000507316	LETM1	O95202	739 aa	Predicted RBP	6.55	□□□□□ -1.36
TUSC3-205	ENST00000507316	SKI	P12755	728 aa		6.55	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms