RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 CHMP4AQ9BY43 222 aa25.73■■□□□ 1.71
SNX25-204ENST00000506896 RGL2O15211 777 aa25.72■■□□□ 1.71
SNX25-204ENST00000506896 TBC1D9BQ66K14 1250 aa25.72■■□□□ 1.71
SNX25-204ENST00000506896 WWC3Q9ULE0 1092 aa25.72■■□□□ 1.71
SNX25-204ENST00000506896 TSR2Q969E8 191 aaKnown RBP25.71■■□□□ 1.71
SNX25-204ENST00000506896 BCORQ6W2J9 1755 aa25.71■■□□□ 1.71
SNX25-204ENST00000506896 HDGFL1Q5TGJ6 251 aa25.7■■□□□ 1.7
SNX25-204ENST00000506896 ZNF521Q96K83 1311 aa25.69■■□□□ 1.7
SNX25-204ENST00000506896 MYL6BP14649 208 aa25.69■■□□□ 1.7
SNX25-204ENST00000506896 MYH16Q9H6N6 1097 aa25.69■■□□□ 1.7
SNX25-204ENST00000506896 ZNF652Q9Y2D9 606 aa25.69■■□□□ 1.7
SNX25-204ENST00000506896 PDIA6Q15084 440 aa25.68■■□□□ 1.7
SNX25-204ENST00000506896 CLEC4GQ6UXB4 293 aa25.68■■□□□ 1.7
SNX25-204ENST00000506896 BICDL1Q6ZP65 573 aa25.68■■□□□ 1.7
SNX25-204ENST00000506896 ZNF784Q8NCA9 323 aaPredicted RBP25.68■■□□□ 1.7
SNX25-204ENST00000506896 DDX21Q9NR30 783 aaKnown RBP eCLIP25.68■■□□□ 1.7
SNX25-204ENST00000506896 FANCIQ9NVI1 1328 aa25.67■■□□□ 1.7
SNX25-204ENST00000506896 C8orf58Q8NAV2 365 aa25.67■■□□□ 1.7
SNX25-204ENST00000506896 DBF4Q9UBU7 674 aaPredicted RBP25.67■■□□□ 1.7
SNX25-204ENST00000506896 GOLGA2Q08379 1002 aa25.66■■□□□ 1.7
SNX25-204ENST00000506896 KIF6Q6ZMV9 814 aa25.66■■□□□ 1.7
SNX25-204ENST00000506896 NECTIN2Q92692 538 aa25.66■■□□□ 1.7
SNX25-204ENST00000506896 PIM2Q9P1W9 311 aa25.66■■□□□ 1.7
SNX25-204ENST00000506896 BCS1LQ9Y276 419 aa25.66■■□□□ 1.7
SNX25-204ENST00000506896 ERVV-1B6SEH8 477 aa25.65■■□□□ 1.7
SNX25-204ENST00000506896 CHRNA5P30532 468 aa25.65■■□□□ 1.7
SNX25-204ENST00000506896 ARFGEF1Q9Y6D6 1849 aa25.65■■□□□ 1.7
SNX25-204ENST00000506896 ELL2O00472 640 aaPredicted RBP25.64■■□□□ 1.7
SNX25-204ENST00000506896 LRP10Q7Z4F1 713 aa25.64■■□□□ 1.7
SNX25-204ENST00000506896 SETDB2Q96T68 719 aa25.64■■□□□ 1.7
SNX25-204ENST00000506896 CHPF2Q9P2E5 772 aa25.64■■□□□ 1.7
SNX25-204ENST00000506896 PROSER3Q2NL68 480 aa25.63■■□□□ 1.69
SNX25-204ENST00000506896 CARMIL3Q8ND23 1372 aa25.63■■□□□ 1.69
SNX25-204ENST00000506896 MAP3K15Q6ZN16 1313 aa25.63■■□□□ 1.69
SNX25-204ENST00000506896 ANKRD31Q8N7Z5 1873 aa25.62■■□□□ 1.69
SNX25-204ENST00000506896 TWISTNBQ3B726 338 aaPredicted RBP25.62■■□□□ 1.69
SNX25-204ENST00000506896 CCDC30Q5VVM6 783 aa25.62■■□□□ 1.69
SNX25-204ENST00000506896 PRR5LQ6MZQ0 368 aa25.62■■□□□ 1.69
SNX25-204ENST00000506896 TSPYL6Q8N831 410 aa25.62■■□□□ 1.69
SNX25-204ENST00000506896 SPINK5Q9NQ38 1064 aaPredicted RBP25.62■■□□□ 1.69
SNX25-204ENST00000506896 HYPKQ9NX55 129 aa25.62■■□□□ 1.69
SNX25-204ENST00000506896 TTLL7Q6ZT98 887 aa25.61■■□□□ 1.69
SNX25-204ENST00000506896 DLEC1Q9Y238 1755 aa25.6■■□□□ 1.69
SNX25-204ENST00000506896 E9PSI1 815 aa25.6■■□□□ 1.69
SNX25-204ENST00000506896 ANXA1P04083 346 aa25.6■■□□□ 1.69
SNX25-204ENST00000506896 NUP98P52948 1817 aa25.59■■□□□ 1.69
SNX25-204ENST00000506896 HLFQ16534 295 aa25.59■■□□□ 1.69
SNX25-204ENST00000506896 DALRD3Q5D0E6 543 aaKnown RBP25.59■■□□□ 1.69
SNX25-204ENST00000506896 BRIP1Q9BX63 1249 aa25.59■■□□□ 1.69
SNX25-204ENST00000506896 COPS6Q7L5N1 327 aa25.58■■□□□ 1.69
SNX25-204ENST00000506896 XAGE3Q8WTP9 111 aa25.58■■□□□ 1.69
SNX25-204ENST00000506896 EXOSC9Q06265 439 aaKnown RBP25.57■■□□□ 1.68
SNX25-204ENST00000506896 ZBTB3Q9H5J0 574 aa25.57■■□□□ 1.68
SNX25-204ENST00000506896 GIGYF2Q6Y7W6 1299 aaKnown RBP25.56■■□□□ 1.68
SNX25-204ENST00000506896 C2CD5Q86YS7 1000 aa25.56■■□□□ 1.68
SNX25-204ENST00000506896 CCDC24Q8N4L8 307 aa25.56■■□□□ 1.68
SNX25-204ENST00000506896 STK31Q9BXU1 1019 aa25.56■■□□□ 1.68
SNX25-204ENST00000506896 PDZRN3Q9UPQ7 1066 aa25.56■■□□□ 1.68
SNX25-204ENST00000506896 NIP7Q9Y221 180 aaKnown RBP eCLIP25.56■■□□□ 1.68
SNX25-204ENST00000506896 ATP10DQ9P241 1426 aa25.55■■□□□ 1.68
SNX25-204ENST00000506896 H0YIN7 160 aa25.55■■□□□ 1.68
SNX25-204ENST00000506896 PDE6BP35913 854 aa25.55■■□□□ 1.68
SNX25-204ENST00000506896 AIMP1Q12904 312 aaKnown RBP25.55■■□□□ 1.68
SNX25-204ENST00000506896 ARHGAP27Q6ZUM4 889 aa25.55■■□□□ 1.68
SNX25-204ENST00000506896 CNBD1Q8NA66 436 aa25.55■■□□□ 1.68
SNX25-204ENST00000506896 ADCY9O60503 1353 aa25.55■■□□□ 1.68
SNX25-204ENST00000506896 SLFN5Q08AF3 891 aa25.54■■□□□ 1.68
SNX25-204ENST00000506896 VAMP4O75379 141 aa25.53■■□□□ 1.68
SNX25-204ENST00000506896 HSP90AB3PQ58FF7 597 aa25.53■■□□□ 1.68
SNX25-204ENST00000506896 NBPF5PQ86XG9 351 aaPredicted RBP25.52■■□□□ 1.68
SNX25-204ENST00000506896 TTLL6Q8N841 843 aa25.52■■□□□ 1.68
SNX25-204ENST00000506896 PLBD2Q8NHP8 589 aa25.52■■□□□ 1.68
SNX25-204ENST00000506896 NPHP1O15259 732 aa25.51■■□□□ 1.67
SNX25-204ENST00000506896 ST5P78524 1137 aa25.51■■□□□ 1.67
SNX25-204ENST00000506896 TPTE2Q6XPS3 522 aa25.51■■□□□ 1.67
SNX25-204ENST00000506896 ANKRD13DQ6ZTN6 518 aa25.51■■□□□ 1.67
SNX25-204ENST00000506896 COL11A2P13942 1736 aaPredicted RBP25.51■■□□□ 1.67
SNX25-204ENST00000506896 HNRNPUQ00839 825 aaKnown RBP eCLIP25.5■■□□□ 1.67
SNX25-204ENST00000506896 SBF1O95248 1867 aa25.49■■□□□ 1.67
SNX25-204ENST00000506896 KLRG2A4D1S0 409 aaPredicted RBP25.49■■□□□ 1.67
SNX25-204ENST00000506896 PARP10Q53GL7 1025 aa25.49■■□□□ 1.67
SNX25-204ENST00000506896 ZNF34Q8IZ26 560 aa25.49■■□□□ 1.67
SNX25-204ENST00000506896 PHAXQ9H814 394 aaKnown RBP25.49■■□□□ 1.67
SNX25-204ENST00000506896 DDX58O95786 925 aaKnown RBP25.48■■□□□ 1.67
SNX25-204ENST00000506896 TRMT2AQ8IZ69 625 aaKnown RBP25.48■■□□□ 1.67
SNX25-204ENST00000506896 CDCA7LQ96GN5 454 aa25.48■■□□□ 1.67
SNX25-204ENST00000506896 NYXQ9GZU5 481 aa25.48■■□□□ 1.67
SNX25-204ENST00000506896 IBTKQ9P2D0 1353 aaPredicted RBP25.47■■□□□ 1.67
SNX25-204ENST00000506896 SLC4A2P04920 1241 aa25.47■■□□□ 1.67
SNX25-204ENST00000506896 SRGNP10124 158 aa25.47■■□□□ 1.67
SNX25-204ENST00000506896 TCIRG1Q13488 830 aa25.47■■□□□ 1.67
SNX25-204ENST00000506896 ZNF622Q969S3 477 aaKnown RBP eCLIP25.47■■□□□ 1.67
SNX25-204ENST00000506896 CACNA1FO60840 1977 aa25.47■■□□□ 1.67
SNX25-204ENST00000506896 GPTP24298 496 aa25.46■■□□□ 1.67
SNX25-204ENST00000506896 RIC3Q7Z5B4 369 aa25.46■■□□□ 1.67
SNX25-204ENST00000506896 UBN2Q6ZU65 1347 aa25.45■■□□□ 1.66
SNX25-204ENST00000506896 FAM177BA6PVY3 158 aa25.45■■□□□ 1.66
SNX25-204ENST00000506896 STYK1Q6J9G0 422 aa25.45■■□□□ 1.66
SNX25-204ENST00000506896 PPP1R42Q7Z4L9 355 aa25.45■■□□□ 1.66
SNX25-204ENST00000506896 ANKRD36CQ5JPF3 1778 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms