RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 TIMM10P62072 90 aa11.44□□□□□ -0.58
PHF3-208ENST00000506783 GNL2Q13823 731 aaKnown RBP11.44□□□□□ -0.58
PHF3-208ENST00000506783 PKNOX2Q96KN3 472 aa11.44□□□□□ -0.58
PHF3-208ENST00000506783 PTPRCP08575 1304 aa11.44□□□□□ -0.58
PHF3-208ENST00000506783 CFAP74Q9C0B2 1584 aa11.44□□□□□ -0.58
PHF3-208ENST00000506783 BECN2A8MW95 431 aa11.44□□□□□ -0.58
PHF3-208ENST00000506783 RXRAP19793 462 aa11.44□□□□□ -0.58
PHF3-208ENST00000506783 PTMSP20962 102 aa11.44□□□□□ -0.58
PHF3-208ENST00000506783 NMIQ13287 307 aaPredicted RBP11.44□□□□□ -0.58
PHF3-208ENST00000506783 CADPS2Q86UW7 1296 aa11.44□□□□□ -0.58
PHF3-208ENST00000506783 NCOA5Q9HCD5 579 aaKnown RBP11.44□□□□□ -0.58
PHF3-208ENST00000506783 RBM8AQ9Y5S9 174 aaKnown RBP11.44□□□□□ -0.58
PHF3-208ENST00000506783 MBD3O95983 291 aa11.44□□□□□ -0.58
PHF3-208ENST00000506783 POLR3DP05423 398 aaPredicted RBP11.44□□□□□ -0.58
PHF3-208ENST00000506783 BLOC1S2Q6QNY1 142 aa11.44□□□□□ -0.58
PHF3-208ENST00000506783 BICC1Q9H694 974 aaKnown RBP11.44□□□□□ -0.58
PHF3-208ENST00000506783 LIMCH1Q9UPQ0 1083 aa11.44□□□□□ -0.58
PHF3-208ENST00000506783 SPHKAPQ2M3C7 1700 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 PLXNC1O60486 1568 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 ZNF335Q9H4Z2 1342 aaPredicted RBP11.43□□□□□ -0.58
PHF3-208ENST00000506783 PIBF1Q8WXW3 757 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 DIP2CQ9Y2E4 1556 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 CHAF1AQ13111 956 aaPredicted RBP11.43□□□□□ -0.58
PHF3-208ENST00000506783 ZNF594Q96JF6 807 aaPredicted RBP11.43□□□□□ -0.58
PHF3-208ENST00000506783 DACT1Q9NYF0 836 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 CCDC39Q9UFE4 941 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.43□□□□□ -0.58
PHF3-208ENST00000506783 UBAP1LF5GYI3 381 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 GOLIM4O00461 696 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 SLC4A8Q2Y0W8 1093 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 XAGE3Q8WTP9 111 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 UBE2Q2Q8WVN8 375 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 RUFY2Q8WXA3 655 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 SPATA32Q96LK8 384 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 CEP152O94986 1710 aa11.43□□□□□ -0.58
PHF3-208ENST00000506783 RUFY3Q7L099 469 aa11.42□□□□□ -0.58
PHF3-208ENST00000506783 BRF1Q92994 677 aa11.42□□□□□ -0.58
PHF3-208ENST00000506783 TNMDQ9H2S6 317 aa11.42□□□□□ -0.58
PHF3-208ENST00000506783 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.42□□□□□ -0.58
PHF3-208ENST00000506783 LRMPQ12912 555 aa11.42□□□□□ -0.58
PHF3-208ENST00000506783 EFCAB6Q5THR3 1501 aa11.42□□□□□ -0.58
PHF3-208ENST00000506783 RNF17Q9BXT8 1623 aaKnown RBP11.42□□□□□ -0.58
PHF3-208ENST00000506783 PHF14O94880 888 aa11.42□□□□□ -0.58
PHF3-208ENST00000506783 CDC37L1Q7L3B6 337 aa11.42□□□□□ -0.58
PHF3-208ENST00000506783 SDF4Q9BRK5 362 aa11.42□□□□□ -0.58
PHF3-208ENST00000506783 KIF1BO60333 1816 aa11.41□□□□□ -0.58
PHF3-208ENST00000506783 GPTP24298 496 aa11.41□□□□□ -0.58
PHF3-208ENST00000506783 CCAR2Q8N163 923 aaKnown RBP11.41□□□□□ -0.58
PHF3-208ENST00000506783 ECHDC1Q9NTX5 307 aa11.41□□□□□ -0.58
PHF3-208ENST00000506783 A0A087WZG4 1122 aa11.41□□□□□ -0.58
PHF3-208ENST00000506783 GOLGA6L19H0YKK7 550 aa11.41□□□□□ -0.58
PHF3-208ENST00000506783 ZSCAN22P10073 491 aaPredicted RBP11.41□□□□□ -0.58
PHF3-208ENST00000506783 ME1P48163 572 aa11.41□□□□□ -0.58
PHF3-208ENST00000506783 MEX3CQ5U5Q3 659 aaKnown RBP11.41□□□□□ -0.58
PHF3-208ENST00000506783 EAF2Q96CJ1 260 aaPredicted RBP11.41□□□□□ -0.58
PHF3-208ENST00000506783 DNAJC25Q9H1X3 360 aa11.41□□□□□ -0.58
PHF3-208ENST00000506783 LRRC7Q96NW7 1537 aa11.41□□□□□ -0.58
PHF3-208ENST00000506783 PTGS1P23219 599 aa11.4□□□□□ -0.58
PHF3-208ENST00000506783 ME3Q16798 604 aa11.4□□□□□ -0.58
PHF3-208ENST00000506783 RRP12Q5JTH9 1297 aaKnown RBP11.4□□□□□ -0.58
PHF3-208ENST00000506783 LARP1Q6PKG0 1096 aaKnown RBP11.4□□□□□ -0.58
PHF3-208ENST00000506783 LIG1P18858 919 aa11.4□□□□□ -0.58
PHF3-208ENST00000506783 PLEKHO1Q53GL0 409 aaPredicted RBP11.4□□□□□ -0.58
PHF3-208ENST00000506783 SASS6Q6UVJ0 657 aa11.4□□□□□ -0.58
PHF3-208ENST00000506783 SUCLG2Q96I99 432 aa11.4□□□□□ -0.58
PHF3-208ENST00000506783 NRBP1Q9UHY1 535 aa11.4□□□□□ -0.58
PHF3-208ENST00000506783 A0A0D9SFI3 127 aa11.4□□□□□ -0.58
PHF3-208ENST00000506783 GLRX3O76003 335 aaKnown RBP11.4□□□□□ -0.58
PHF3-208ENST00000506783 GJB4Q9NTQ9 266 aa11.4□□□□□ -0.58
PHF3-208ENST00000506783 ZKSCAN5Q9Y2L8 839 aa11.4□□□□□ -0.58
PHF3-208ENST00000506783 USP16Q9Y5T5 823 aa11.39□□□□□ -0.59
PHF3-208ENST00000506783 A2ML1A8K2U0 1454 aa11.39□□□□□ -0.59
PHF3-208ENST00000506783 FAM135BQ49AJ0 1406 aa11.39□□□□□ -0.59
PHF3-208ENST00000506783 A0A0U1RQG5 324 aaPredicted RBP11.39□□□□□ -0.59
PHF3-208ENST00000506783 GCP02774 474 aa11.39□□□□□ -0.59
PHF3-208ENST00000506783 CCDC186Q7Z3E2 898 aa11.39□□□□□ -0.59
PHF3-208ENST00000506783 ANKRD24Q8TF21 1146 aa11.39□□□□□ -0.59
PHF3-208ENST00000506783 IQSEC3Q9UPP2 1182 aaPredicted RBP11.39□□□□□ -0.59
PHF3-208ENST00000506783 PPRC1Q5VV67 1664 aaKnown RBP11.39□□□□□ -0.59
PHF3-208ENST00000506783 BRD1O95696 1058 aa11.39□□□□□ -0.59
PHF3-208ENST00000506783 NAA30Q147X3 362 aaPredicted RBP11.39□□□□□ -0.59
PHF3-208ENST00000506783 TTLL5Q6EMB2 1281 aa11.39□□□□□ -0.59
PHF3-208ENST00000506783 F13A1P00488 732 aa11.38□□□□□ -0.59
PHF3-208ENST00000506783 TPD52L1Q16890 204 aaPredicted RBP11.38□□□□□ -0.59
PHF3-208ENST00000506783 ZNF589Q86UQ0 364 aaPredicted RBP11.38□□□□□ -0.59
PHF3-208ENST00000506783 NUP62CLQ9H1M0 184 aa11.38□□□□□ -0.59
PHF3-208ENST00000506783 ATP6V1DQ9Y5K8 247 aa11.38□□□□□ -0.59
PHF3-208ENST00000506783 SGSM2O43147 1006 aa11.38□□□□□ -0.59
PHF3-208ENST00000506783 KRT85P78386 507 aa11.38□□□□□ -0.59
PHF3-208ENST00000506783 TFCP2Q12800 502 aa11.38□□□□□ -0.59
PHF3-208ENST00000506783 ANO6Q4KMQ2 910 aa11.38□□□□□ -0.59
PHF3-208ENST00000506783 TRERF1Q96PN7 1200 aa11.38□□□□□ -0.59
PHF3-208ENST00000506783 TPCN1Q9ULQ1 816 aa11.38□□□□□ -0.59
PHF3-208ENST00000506783 QRICH2Q9H0J4 1663 aa11.38□□□□□ -0.59
PHF3-208ENST00000506783 DDX58O95786 925 aaKnown RBP11.38□□□□□ -0.59
PHF3-208ENST00000506783 DBNDD2Q9BQY9 259 aa11.38□□□□□ -0.59
PHF3-208ENST00000506783 GPHNQ9NQX3 736 aaPredicted RBP11.38□□□□□ -0.59
PHF3-208ENST00000506783 DBF4Q9UBU7 674 aaPredicted RBP11.38□□□□□ -0.59
PHF3-208ENST00000506783 GLI2P10070 1586 aa11.38□□□□□ -0.59
PHF3-208ENST00000506783 IQSEC2Q5JU85 1478 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms