RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ADAMTS7Q9UKP4 1686 aa9.5□□□□□ -0.89
GYPB-206ENST00000506516 HEG1Q9ULI3 1381 aa9.5□□□□□ -0.89
GYPB-206ENST00000506516 PAPPAQ13219 1627 aa9.49□□□□□ -0.89
GYPB-206ENST00000506516 TTLL13PA6NNM8 815 aa9.49□□□□□ -0.89
GYPB-206ENST00000506516 C7P10643 843 aa9.49□□□□□ -0.89
GYPB-206ENST00000506516 DIEXFQ68CQ4 756 aaKnown RBP9.49□□□□□ -0.89
GYPB-206ENST00000506516 CCDC87Q9NVE4 849 aa9.49□□□□□ -0.89
GYPB-206ENST00000506516 TRIM35Q9UPQ4 493 aa9.49□□□□□ -0.89
GYPB-206ENST00000506516 LAS1LQ9Y4W2 734 aaKnown RBP9.49□□□□□ -0.89
GYPB-206ENST00000506516 SRCAPQ6ZRS2 3230 aa9.48□□□□□ -0.89
GYPB-206ENST00000506516 CCER2I3L3R5 266 aa9.48□□□□□ -0.89
GYPB-206ENST00000506516 MKRN3Q13064 507 aaKnown RBP9.48□□□□□ -0.89
GYPB-206ENST00000506516 INTS5Q6P9B9 1019 aaKnown RBP9.48□□□□□ -0.89
GYPB-206ENST00000506516 ARHGEF1Q92888 912 aaKnown RBP9.48□□□□□ -0.89
GYPB-206ENST00000506516 METRNQ9UJH8 293 aa9.48□□□□□ -0.89
GYPB-206ENST00000506516 C4BP0C0L5 1744 aa9.48□□□□□ -0.89
GYPB-206ENST00000506516 CANXP27824 592 aaKnown RBP9.47□□□□□ -0.89
GYPB-206ENST00000506516 PTGER2P43116 358 aa9.47□□□□□ -0.89
GYPB-206ENST00000506516 EIF4A1P60842 406 aaKnown RBP9.47□□□□□ -0.89
GYPB-206ENST00000506516 SMIM5Q71RC9 77 aa9.47□□□□□ -0.89
GYPB-206ENST00000506516 NLGN1Q8N2Q7 840 aa9.47□□□□□ -0.89
GYPB-206ENST00000506516 ARXQ96QS3 562 aa9.47□□□□□ -0.89
GYPB-206ENST00000506516 USP16Q9Y5T5 823 aa9.47□□□□□ -0.89
GYPB-206ENST00000506516 C5P01031 1676 aa9.47□□□□□ -0.89
GYPB-206ENST00000506516 ZNF831Q5JPB2 1677 aa9.47□□□□□ -0.89
GYPB-206ENST00000506516 KCPQ6ZWJ8 1503 aa9.46□□□□□ -0.89
GYPB-206ENST00000506516 A0A087WZG4 1122 aa9.46□□□□□ -0.9
GYPB-206ENST00000506516 CHL1O00533 1208 aa9.46□□□□□ -0.9
GYPB-206ENST00000506516 ZPR1O75312 459 aa9.46□□□□□ -0.9
GYPB-206ENST00000506516 GIGYF1O75420 1035 aaPredicted RBP9.46□□□□□ -0.9
GYPB-206ENST00000506516 CCDC27Q2M243 656 aa9.46□□□□□ -0.9
GYPB-206ENST00000506516 AMIGO3Q86WK7 504 aa9.46□□□□□ -0.9
GYPB-206ENST00000506516 NGEFQ8N5V2 710 aa9.46□□□□□ -0.9
GYPB-206ENST00000506516 ZBTB1Q9Y2K1 713 aa9.46□□□□□ -0.9
GYPB-206ENST00000506516 PPP1R37O75864 691 aa9.45□□□□□ -0.9
GYPB-206ENST00000506516 A1BGP04217 495 aa9.45□□□□□ -0.9
GYPB-206ENST00000506516 IL6STP40189 918 aaPredicted RBP9.45□□□□□ -0.9
GYPB-206ENST00000506516 EIF5P55010 431 aaKnown RBP9.45□□□□□ -0.9
GYPB-206ENST00000506516 GNAI1P63096 354 aa9.45□□□□□ -0.9
GYPB-206ENST00000506516 MSL1Q68DK7 614 aa9.45□□□□□ -0.9
GYPB-206ENST00000506516 SOS1Q07889 1333 aaPredicted RBP9.45□□□□□ -0.9
GYPB-206ENST00000506516 PRAMEF22A3QJZ6 481 aa9.44□□□□□ -0.9
GYPB-206ENST00000506516 POTEB2H3BUK9 544 aa9.44□□□□□ -0.9
GYPB-206ENST00000506516 WWC1Q8IX03 1113 aa9.44□□□□□ -0.9
GYPB-206ENST00000506516 IFT57Q9NWB7 429 aa9.44□□□□□ -0.9
GYPB-206ENST00000506516 NARFQ9UHQ1 456 aa9.44□□□□□ -0.9
GYPB-206ENST00000506516 ZNF330Q9Y3S2 320 aaPredicted RBP9.44□□□□□ -0.9
GYPB-206ENST00000506516 TAF1LQ8IZX4 1826 aa9.44□□□□□ -0.9
GYPB-206ENST00000506516 SIPA1L3O60292 1781 aaPredicted RBP9.43□□□□□ -0.9
GYPB-206ENST00000506516 CASZ1Q86V15 1759 aa9.43□□□□□ -0.9
GYPB-206ENST00000506516 QSER1Q2KHR3 1735 aa9.43□□□□□ -0.9
GYPB-206ENST00000506516 GYS1P13807 737 aa9.43□□□□□ -0.9
GYPB-206ENST00000506516 USPL1Q5W0Q7 1092 aa9.43□□□□□ -0.9
GYPB-206ENST00000506516 MS4A4AQ96JQ5 239 aa9.43□□□□□ -0.9
GYPB-206ENST00000506516 CHMP4AQ9BY43 222 aa9.43□□□□□ -0.9
GYPB-206ENST00000506516 SALL2Q9Y467 1007 aaPredicted RBP9.43□□□□□ -0.9
GYPB-206ENST00000506516 PARP3Q9Y6F1 533 aa9.43□□□□□ -0.9
GYPB-206ENST00000506516 VIRMAQ69YN4 1812 aaKnown RBP9.42□□□□□ -0.9
GYPB-206ENST00000506516 LRP5O75197 1615 aa9.42□□□□□ -0.9
GYPB-206ENST00000506516 COL15A1P39059 1388 aa9.42□□□□□ -0.9
GYPB-206ENST00000506516 USP42Q9H9J4 1324 aaKnown RBP9.42□□□□□ -0.9
GYPB-206ENST00000506516 SENP3-EIF4A1A0A087X0R7 540 aa9.42□□□□□ -0.9
GYPB-206ENST00000506516 ZNF853P0CG23 659 aa9.42□□□□□ -0.9
GYPB-206ENST00000506516 EIF2S2P20042 333 aaKnown RBP9.42□□□□□ -0.9
GYPB-206ENST00000506516 WDR63Q8IWG1 891 aa9.42□□□□□ -0.9
GYPB-206ENST00000506516 FHDC1Q9C0D6 1143 aaPredicted RBP9.42□□□□□ -0.9
GYPB-206ENST00000506516 MBIPQ9NS73 344 aa9.42□□□□□ -0.9
GYPB-206ENST00000506516 SRP68Q9UHB9 627 aaKnown RBP9.42□□□□□ -0.9
GYPB-206ENST00000506516 DLG5Q8TDM6 1919 aa9.42□□□□□ -0.9
GYPB-206ENST00000506516 IL16Q14005 1332 aa9.41□□□□□ -0.9
GYPB-206ENST00000506516 ERBB4Q15303 1308 aa9.41□□□□□ -0.9
GYPB-206ENST00000506516 MMP10P09238 476 aa9.41□□□□□ -0.9
GYPB-206ENST00000506516 HOXB7P09629 217 aa9.41□□□□□ -0.9
GYPB-206ENST00000506516 DZIP3Q86Y13 1208 aaKnown RBP9.41□□□□□ -0.9
GYPB-206ENST00000506516 SYT17Q9BSW7 474 aa9.41□□□□□ -0.9
GYPB-206ENST00000506516 TBC1D2BQ9UPU7 963 aa9.41□□□□□ -0.9
GYPB-206ENST00000506516 UBR2Q8IWV8 1755 aa9.41□□□□□ -0.9
GYPB-206ENST00000506516 COL5A3P25940 1745 aaPredicted RBP9.41□□□□□ -0.9
GYPB-206ENST00000506516 TJP1Q07157 1748 aa9.41□□□□□ -0.9
GYPB-206ENST00000506516 CICQ96RK0 1608 aaPredicted RBP9.41□□□□□ -0.9
GYPB-206ENST00000506516 MYL6BP14649 208 aa9.4□□□□□ -0.9
GYPB-206ENST00000506516 TM4SF1P30408 202 aa9.4□□□□□ -0.9
GYPB-206ENST00000506516 PIP4K2AP48426 406 aaPredicted RBP9.4□□□□□ -0.9
GYPB-206ENST00000506516 ZNF652Q9Y2D9 606 aa9.4□□□□□ -0.9
GYPB-206ENST00000506516 CD2APQ9Y5K6 639 aa9.4□□□□□ -0.9
GYPB-206ENST00000506516 UBR3Q6ZT12 1888 aa9.4□□□□□ -0.91
GYPB-206ENST00000506516 NBPF26B4DH59 902 aa9.39□□□□□ -0.91
GYPB-206ENST00000506516 IER5LQ5T953 404 aa9.39□□□□□ -0.91
GYPB-206ENST00000506516 HDGFL1Q5TGJ6 251 aa9.39□□□□□ -0.91
GYPB-206ENST00000506516 DUSP27Q5VZP5 1158 aa9.39□□□□□ -0.91
GYPB-206ENST00000506516 NBPF10Q6P3W6 841 aaKnown RBP9.39□□□□□ -0.91
GYPB-206ENST00000506516 CLEC4GQ6UXB4 293 aa9.39□□□□□ -0.91
GYPB-206ENST00000506516 KIF6Q6ZMV9 814 aa9.39□□□□□ -0.91
GYPB-206ENST00000506516 NBPF15Q8N660 670 aa9.39□□□□□ -0.91
GYPB-206ENST00000506516 TUBGCP6Q96RT7 1819 aa9.38□□□□□ -0.91
GYPB-206ENST00000506516 POTEFA5A3E0 1075 aa9.38□□□□□ -0.91
GYPB-206ENST00000506516 ERVV-1B6SEH8 477 aa9.38□□□□□ -0.91
GYPB-206ENST00000506516 ELL2O00472 640 aaPredicted RBP9.38□□□□□ -0.91
GYPB-206ENST00000506516 KRT24Q2M2I5 525 aa9.38□□□□□ -0.91
GYPB-206ENST00000506516 NECTIN2Q92692 538 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms