RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 FBXO45P0C2W1 286 aa9.38□□□□□ -0.91
SMAD5-201ENST00000506223 ZNF326Q5BKZ1 582 aaKnown RBP9.38□□□□□ -0.91
SMAD5-201ENST00000506223 NKX2-3Q8TAU0 364 aa9.38□□□□□ -0.91
SMAD5-201ENST00000506223 PPP1R1BQ9UD71 204 aaPredicted RBP9.38□□□□□ -0.91
SMAD5-201ENST00000506223 RGPD8O14715 1765 aaPredicted RBP9.37□□□□□ -0.91
SMAD5-201ENST00000506223 THSD7AQ9UPZ6 1657 aa9.37□□□□□ -0.91
SMAD5-201ENST00000506223 ZBBXA8MT70 800 aa9.37□□□□□ -0.91
SMAD5-201ENST00000506223 SOX11P35716 441 aa9.37□□□□□ -0.91
SMAD5-201ENST00000506223 NR1H3Q13133 447 aa9.37□□□□□ -0.91
SMAD5-201ENST00000506223 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
SMAD5-201ENST00000506223 ARMC2Q8NEN0 867 aa9.37□□□□□ -0.91
SMAD5-201ENST00000506223 ALG2Q9H553 416 aa9.37□□□□□ -0.91
SMAD5-201ENST00000506223 S1PR4O95977 384 aa9.36□□□□□ -0.91
SMAD5-201ENST00000506223 EIF4G2P78344 907 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMAD5-201ENST00000506223 RNF166Q96A37 237 aaPredicted RBP9.36□□□□□ -0.91
SMAD5-201ENST00000506223 HCSTQ9UBK5 93 aa9.36□□□□□ -0.91
SMAD5-201ENST00000506223 HFM1A2PYH4 1435 aa9.36□□□□□ -0.91
SMAD5-201ENST00000506223 PRAG1Q86YV5 1406 aa9.36□□□□□ -0.91
SMAD5-201ENST00000506223 LRPPRCP42704 1394 aaKnown RBP9.36□□□□□ -0.91
SMAD5-201ENST00000506223 CLTCL1P53675 1640 aa9.35□□□□□ -0.91
SMAD5-201ENST00000506223 FAM83GA6ND36 823 aa9.35□□□□□ -0.91
SMAD5-201ENST00000506223 TRIM37O94972 964 aa9.35□□□□□ -0.91
SMAD5-201ENST00000506223 SEMA3FQ13275 785 aa9.35□□□□□ -0.91
SMAD5-201ENST00000506223 NBPF14Q5TI25 921 aa9.35□□□□□ -0.91
SMAD5-201ENST00000506223 SPON1Q9HCB6 807 aa9.35□□□□□ -0.91
SMAD5-201ENST00000506223 PCDH10Q9P2E7 1040 aa9.35□□□□□ -0.91
SMAD5-201ENST00000506223 KIF1AQ12756 1690 aa9.35□□□□□ -0.91
SMAD5-201ENST00000506223 FMN2Q9NZ56 1722 aa9.34□□□□□ -0.91
SMAD5-201ENST00000506223 NRKQ7Z2Y5 1582 aa9.34□□□□□ -0.91
SMAD5-201ENST00000506223 NAIPQ13075 1403 aa9.34□□□□□ -0.91
SMAD5-201ENST00000506223 KIF1BO60333 1816 aa9.34□□□□□ -0.91
SMAD5-201ENST00000506223 KCNQ2O43526 872 aa9.34□□□□□ -0.91
SMAD5-201ENST00000506223 PTCRAQ6ISU1 281 aaPredicted RBP9.34□□□□□ -0.91
SMAD5-201ENST00000506223 GPKOWQ92917 476 aaPredicted RBP eCLIP9.34□□□□□ -0.91
SMAD5-201ENST00000506223 UNC93B1Q9H1C4 597 aa9.34□□□□□ -0.91
SMAD5-201ENST00000506223 MYOM1P52179 1685 aa9.33□□□□□ -0.92
SMAD5-201ENST00000506223 CCDC144AA2RUR9 1427 aa9.33□□□□□ -0.92
SMAD5-201ENST00000506223 TNS3Q68CZ2 1445 aa9.33□□□□□ -0.92
SMAD5-201ENST00000506223 CASZ1Q86V15 1759 aa9.33□□□□□ -0.92
SMAD5-201ENST00000506223 APBA3O96018 575 aa9.33□□□□□ -0.92
SMAD5-201ENST00000506223 PDXDC2PQ6P474 469 aa9.33□□□□□ -0.92
SMAD5-201ENST00000506223 KRT28Q7Z3Y7 464 aa9.33□□□□□ -0.92
SMAD5-201ENST00000506223 SPNS2Q8IVW8 549 aa9.33□□□□□ -0.92
SMAD5-201ENST00000506223 FCF1Q9Y324 198 aaKnown RBP9.33□□□□□ -0.92
SMAD5-201ENST00000506223 GPSM3Q9Y4H4 160 aa9.33□□□□□ -0.92
SMAD5-201ENST00000506223 PARD3Q8TEW0 1356 aa9.33□□□□□ -0.92
SMAD5-201ENST00000506223 KCNC4Q03721 635 aa9.32□□□□□ -0.92
SMAD5-201ENST00000506223 PTK2Q05397 1052 aa9.32□□□□□ -0.92
SMAD5-201ENST00000506223 COL14A1Q05707 1796 aaKnown RBP9.32□□□□□ -0.92
SMAD5-201ENST00000506223 ITGBL1O95965 494 aaPredicted RBP9.31□□□□□ -0.92
SMAD5-201ENST00000506223 BTG4Q9NY30 223 aa9.31□□□□□ -0.92
SMAD5-201ENST00000506223 SPATA31A5Q5VU36 1347 aa9.31□□□□□ -0.92
SMAD5-201ENST00000506223 SPATA31A7Q8IWB4 1347 aa9.31□□□□□ -0.92
SMAD5-201ENST00000506223 NBPF8Q3BBV2 869 aa9.3□□□□□ -0.92
SMAD5-201ENST00000506223 UCN2Q96RP3 112 aa9.3□□□□□ -0.92
SMAD5-201ENST00000506223 OCSTAMPQ9BR26 566 aa9.3□□□□□ -0.92
SMAD5-201ENST00000506223 PPP1R12CQ9BZL4 782 aa9.3□□□□□ -0.92
SMAD5-201ENST00000506223 IFT172Q9UG01 1749 aa9.3□□□□□ -0.92
SMAD5-201ENST00000506223 FAM196AQ6ZSG2 479 aa9.29□□□□□ -0.92
SMAD5-201ENST00000506223 ARHGAP9Q9BRR9 750 aa9.29□□□□□ -0.92
SMAD5-201ENST00000506223 PPLO60437 1756 aa9.29□□□□□ -0.92
SMAD5-201ENST00000506223 PALM3A6NDB9 673 aaPredicted RBP9.28□□□□□ -0.92
SMAD5-201ENST00000506223 CFAP70Q5T0N1 1121 aa9.28□□□□□ -0.92
SMAD5-201ENST00000506223 WAPLQ7Z5K2 1190 aa9.28□□□□□ -0.92
SMAD5-201ENST00000506223 PDGFDQ9GZP0 370 aaPredicted RBP9.28□□□□□ -0.92
SMAD5-201ENST00000506223 ACIN1Q9UKV3 1341 aaKnown RBP9.28□□□□□ -0.92
SMAD5-201ENST00000506223 CRYBG1Q9Y4K1 1723 aa9.28□□□□□ -0.92
SMAD5-201ENST00000506223 SBNO1A3KN83 1393 aa9.27□□□□□ -0.93
SMAD5-201ENST00000506223 PLEKHH1Q9ULM0 1364 aa9.27□□□□□ -0.93
SMAD5-201ENST00000506223 SH3BP5LQ7L8J4 393 aa9.27□□□□□ -0.93
SMAD5-201ENST00000506223 BAP1Q92560 729 aa9.27□□□□□ -0.93
SMAD5-201ENST00000506223 TRPM3Q9HCF6 1732 aaPredicted RBP9.27□□□□□ -0.93
SMAD5-201ENST00000506223 KNDC1Q76NI1 1749 aa9.26□□□□□ -0.93
SMAD5-201ENST00000506223 PPEF1O14829 653 aaPredicted RBP9.26□□□□□ -0.93
SMAD5-201ENST00000506223 GIGYF1O75420 1035 aaPredicted RBP9.26□□□□□ -0.93
SMAD5-201ENST00000506223 RFX1P22670 979 aa9.26□□□□□ -0.93
SMAD5-201ENST00000506223 LINC01559Q495D7 138 aa9.26□□□□□ -0.93
SMAD5-201ENST00000506223 ZBTB33Q86T24 672 aa9.26□□□□□ -0.93
SMAD5-201ENST00000506223 ADAM32Q8TC27 787 aa9.26□□□□□ -0.93
SMAD5-201ENST00000506223 ZNF592Q92610 1267 aa9.26□□□□□ -0.93
SMAD5-201ENST00000506223 TFIP11Q9UBB9 837 aaKnown RBP9.26□□□□□ -0.93
SMAD5-201ENST00000506223 PCDHB9Q9Y5E1 797 aa9.26□□□□□ -0.93
SMAD5-201ENST00000506223 ALS2Q96Q42 1657 aa9.26□□□□□ -0.93
SMAD5-201ENST00000506223 ARHGEF10O15013 1369 aa9.25□□□□□ -0.93
SMAD5-201ENST00000506223 RNF223E7ERA6 249 aa9.25□□□□□ -0.93
SMAD5-201ENST00000506223 LMOD1P29536 600 aaPredicted RBP9.25□□□□□ -0.93
SMAD5-201ENST00000506223 PSME1Q06323 249 aa9.25□□□□□ -0.93
SMAD5-201ENST00000506223 TBC1D9Q6ZT07 1266 aa9.25□□□□□ -0.93
SMAD5-201ENST00000506223 CARD14Q9BXL6 1004 aa9.25□□□□□ -0.93
SMAD5-201ENST00000506223 STK26Q9P289 416 aa9.25□□□□□ -0.93
SMAD5-201ENST00000506223 NRXN1Q9ULB1 1477 aa9.25□□□□□ -0.93
SMAD5-201ENST00000506223 SBF2Q86WG5 1849 aa9.24□□□□□ -0.93
SMAD5-201ENST00000506223 TECPR2O15040 1411 aa9.24□□□□□ -0.93
SMAD5-201ENST00000506223 MAGEB6P1A0A0J9YX57 407 aa9.24□□□□□ -0.93
SMAD5-201ENST00000506223 ZBTB7AO95365 584 aa9.24□□□□□ -0.93
SMAD5-201ENST00000506223 GGCXP38435 758 aa9.24□□□□□ -0.93
SMAD5-201ENST00000506223 SH3RF1Q7Z6J0 888 aa9.24□□□□□ -0.93
SMAD5-201ENST00000506223 ZNF511Q8NB15 262 aa9.24□□□□□ -0.93
SMAD5-201ENST00000506223 PBXIP1Q96AQ6 731 aa9.24□□□□□ -0.93
SMAD5-201ENST00000506223 FHDC1Q9C0D6 1143 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms