RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 MRPL50Q8N5N7 158 aaKnown RBP14.49□□□□□ -0.09
SGCA-205ENST00000505964 IPO8O15397 1037 aaKnown RBP14.48□□□□□ -0.09
SGCA-205ENST00000505964 SNRPA1P09661 255 aaKnown RBP14.48□□□□□ -0.09
SGCA-205ENST00000505964 TGFB2P61812 414 aa14.48□□□□□ -0.09
SGCA-205ENST00000505964 PDE3AQ14432 1141 aa14.48□□□□□ -0.09
SGCA-205ENST00000505964 C9orf131Q5VYM1 1079 aa14.48□□□□□ -0.09
SGCA-205ENST00000505964 ERICH6BQ5W0A0 696 aa14.48□□□□□ -0.09
SGCA-205ENST00000505964 C16orf71Q8IYS4 520 aaPredicted RBP14.48□□□□□ -0.09
SGCA-205ENST00000505964 ARHGAP45Q92619 1136 aa14.48□□□□□ -0.09
SGCA-205ENST00000505964 ZNF496Q96IT1 587 aaPredicted RBP14.48□□□□□ -0.09
SGCA-205ENST00000505964 BCL2L13Q9BXK5 485 aa14.48□□□□□ -0.09
SGCA-205ENST00000505964 TNRC6CQ9HCJ0 1690 aaKnown RBP14.48□□□□□ -0.09
SGCA-205ENST00000505964 MS4A1P11836 297 aa14.47□□□□□ -0.09
SGCA-205ENST00000505964 TRAPPC3LQ5T215 181 aa14.47□□□□□ -0.09
SGCA-205ENST00000505964 HDGFL1Q5TGJ6 251 aa14.47□□□□□ -0.09
SGCA-205ENST00000505964 ZKSCAN2Q63HK3 967 aa14.47□□□□□ -0.09
SGCA-205ENST00000505964 VSIG10Q8N0Z9 540 aa14.47□□□□□ -0.09
SGCA-205ENST00000505964 KLRG1Q96E93 195 aa14.47□□□□□ -0.09
SGCA-205ENST00000505964 STK31Q9BXU1 1019 aa14.47□□□□□ -0.09
SGCA-205ENST00000505964 ATG3Q9NT62 314 aa14.47□□□□□ -0.09
SGCA-205ENST00000505964 RTCBQ9Y3I0 505 aaKnown RBP14.47□□□□□ -0.09
SGCA-205ENST00000505964 CANXP27824 592 aaKnown RBP14.46□□□□□ -0.09
SGCA-205ENST00000505964 RBM46Q8TBY0 533 aaKnown RBP14.46□□□□□ -0.09
SGCA-205ENST00000505964 SLC4A9Q96Q91 983 aa14.46□□□□□ -0.09
SGCA-205ENST00000505964 RBM42Q9BTD8 480 aaKnown RBP14.46□□□□□ -0.09
SGCA-205ENST00000505964 CCDC87Q9NVE4 849 aa14.46□□□□□ -0.09
SGCA-205ENST00000505964 GTF3C3Q9Y5Q9 886 aa14.46□□□□□ -0.09
SGCA-205ENST00000505964 TJP1Q07157 1748 aa14.46□□□□□ -0.1
SGCA-205ENST00000505964 PLIN1O60240 522 aa14.45□□□□□ -0.1
SGCA-205ENST00000505964 FRAT1Q92837 279 aaPredicted RBP14.45□□□□□ -0.1
SGCA-205ENST00000505964 ARHGEF1Q92888 912 aaKnown RBP14.45□□□□□ -0.1
SGCA-205ENST00000505964 TEX13AQ9BXU3 409 aaPredicted RBP14.45□□□□□ -0.1
SGCA-205ENST00000505964 NOB1Q9ULX3 412 aaKnown RBP14.45□□□□□ -0.1
SGCA-205ENST00000505964 PARP3Q9Y6F1 533 aa14.45□□□□□ -0.1
SGCA-205ENST00000505964 PTPRCP08575 1304 aa14.44□□□□□ -0.1
SGCA-205ENST00000505964 ERBB4Q15303 1308 aa14.44□□□□□ -0.1
SGCA-205ENST00000505964 SLC4A2P04920 1241 aa14.44□□□□□ -0.1
SGCA-205ENST00000505964 GYS1P13807 737 aa14.44□□□□□ -0.1
SGCA-205ENST00000505964 KCNA3P22001 575 aa14.44□□□□□ -0.1
SGCA-205ENST00000505964 FKBP8Q14318 412 aa14.44□□□□□ -0.1
SGCA-205ENST00000505964 ATF7IPQ6VMQ6 1270 aa14.44□□□□□ -0.1
SGCA-205ENST00000505964 NLGN1Q8N2Q7 840 aa14.44□□□□□ -0.1
SGCA-205ENST00000505964 EIF2S2P20042 333 aaKnown RBP14.43□□□□□ -0.1
SGCA-205ENST00000505964 RFC4P35249 363 aa14.43□□□□□ -0.1
SGCA-205ENST00000505964 API5Q9BZZ5 524 aaKnown RBP14.43□□□□□ -0.1
SGCA-205ENST00000505964 RRAGCQ9HB90 399 aa14.43□□□□□ -0.1
SGCA-205ENST00000505964 RNF181Q9P0P0 153 aa14.43□□□□□ -0.1
SGCA-205ENST00000505964 DBF4Q9UBU7 674 aaPredicted RBP14.43□□□□□ -0.1
SGCA-205ENST00000505964 AFDNP55196 1824 aaKnown RBP14.43□□□□□ -0.1
SGCA-205ENST00000505964 TCERG1O14776 1098 aaKnown RBP14.42□□□□□ -0.1
SGCA-205ENST00000505964 TNS4Q8IZW8 715 aa14.42□□□□□ -0.1
SGCA-205ENST00000505964 JMYQ8N9B5 988 aa14.42□□□□□ -0.1
SGCA-205ENST00000505964 DDX21Q9NR30 783 aaKnown RBP eCLIP14.42□□□□□ -0.1
SGCA-205ENST00000505964 PRAMEF22A3QJZ6 481 aa14.41□□□□□ -0.1
SGCA-205ENST00000505964 PTCD1O75127 700 aaKnown RBP14.41□□□□□ -0.1
SGCA-205ENST00000505964 TRIM27P14373 513 aa14.41□□□□□ -0.1
SGCA-205ENST00000505964 FSTL1Q12841 308 aa14.41□□□□□ -0.1
SGCA-205ENST00000505964 DZIP1LQ8IYY4 767 aaKnown RBP14.41□□□□□ -0.1
SGCA-205ENST00000505964 HYPKQ9NX55 129 aa14.41□□□□□ -0.1
SGCA-205ENST00000505964 CHPF2Q9P2E5 772 aa14.41□□□□□ -0.1
SGCA-205ENST00000505964 SRP68Q9UHB9 627 aaKnown RBP14.41□□□□□ -0.1
SGCA-205ENST00000505964 USP16Q9Y5T5 823 aa14.41□□□□□ -0.1
SGCA-205ENST00000505964 CHRNA5P30532 468 aa14.4□□□□□ -0.1
SGCA-205ENST00000505964 IRX6P78412 446 aaPredicted RBP14.4□□□□□ -0.1
SGCA-205ENST00000505964 C20orf194Q5TEA3 1177 aa14.4□□□□□ -0.1
SGCA-205ENST00000505964 FTSJ3Q8IY81 847 aaKnown RBP14.4□□□□□ -0.1
SGCA-205ENST00000505964 PIM2Q9P1W9 311 aa14.4□□□□□ -0.1
SGCA-205ENST00000505964 TIAM2Q8IVF5 1701 aa14.4□□□□□ -0.1
SGCA-205ENST00000505964 ABCC4O15439 1325 aa14.4□□□□□ -0.1
SGCA-205ENST00000505964 KDM2BQ8NHM5 1336 aa14.4□□□□□ -0.1
SGCA-205ENST00000505964 CNTNAP4Q9C0A0 1308 aa14.4□□□□□ -0.1
SGCA-205ENST00000505964 RPS6KA4O75676 772 aa14.39□□□□□ -0.11
SGCA-205ENST00000505964 ADRA2BP18089 450 aa14.39□□□□□ -0.11
SGCA-205ENST00000505964 FLIIQ13045 1269 aa14.39□□□□□ -0.11
SGCA-205ENST00000505964 PDIA6Q15084 440 aa14.39□□□□□ -0.11
SGCA-205ENST00000505964 DALRD3Q5D0E6 543 aaKnown RBP14.39□□□□□ -0.11
SGCA-205ENST00000505964 RC3H1Q5TC82 1133 aaKnown RBP14.39□□□□□ -0.11
SGCA-205ENST00000505964 G2E3Q7L622 706 aa14.39□□□□□ -0.11
SGCA-205ENST00000505964 NECTIN2Q92692 538 aa14.39□□□□□ -0.11
SGCA-205ENST00000505964 STARD3NLO95772 234 aa14.38□□□□□ -0.11
SGCA-205ENST00000505964 RASSF7Q02833 373 aa14.38□□□□□ -0.11
SGCA-205ENST00000505964 DDR1Q08345 913 aa14.38□□□□□ -0.11
SGCA-205ENST00000505964 AAMPQ13685 434 aa14.38□□□□□ -0.11
SGCA-205ENST00000505964 CRBNQ96SW2 442 aa14.38□□□□□ -0.11
SGCA-205ENST00000505964 RLBP1P12271 317 aa14.37□□□□□ -0.11
SGCA-205ENST00000505964 MVPQ14764 893 aaKnown RBP14.37□□□□□ -0.11
SGCA-205ENST00000505964 DNAJC10Q8IXB1 793 aa14.37□□□□□ -0.11
SGCA-205ENST00000505964 PANK1Q8TE04 598 aa14.37□□□□□ -0.11
SGCA-205ENST00000505964 TNNQ9UQP3 1299 aa14.37□□□□□ -0.11
SGCA-205ENST00000505964 DLEC1Q9Y238 1755 aa14.37□□□□□ -0.11
SGCA-205ENST00000505964 ARFGEF2Q9Y6D5 1785 aa14.37□□□□□ -0.11
SGCA-205ENST00000505964 CRKLP46109 303 aaKnown RBP14.36□□□□□ -0.11
SGCA-205ENST00000505964 PRELPP51888 382 aa14.36□□□□□ -0.11
SGCA-205ENST00000505964 FKBP5Q13451 457 aaPredicted RBP14.36□□□□□ -0.11
SGCA-205ENST00000505964 LRP10Q7Z4F1 713 aa14.36□□□□□ -0.11
SGCA-205ENST00000505964 CLUAP1Q96AJ1 413 aa14.36□□□□□ -0.11
SGCA-205ENST00000505964 PHAXQ9H814 394 aaKnown RBP14.36□□□□□ -0.11
SGCA-205ENST00000505964 CYP19A1P11511 503 aaPredicted RBP14.35□□□□□ -0.11
SGCA-205ENST00000505964 PROSER3Q2NL68 480 aa14.35□□□□□ -0.11
SGCA-205ENST00000505964 INTS3Q68E01 1043 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms