RNA–Protein interactions for RNA: ENST00000505353.1

SIL1-206, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-206ENST00000505353 MIER1Q8N108 512 aa12.3□□□□□ -0.44
SIL1-206ENST00000505353 DDX21Q9NR30 783 aaKnown RBP eCLIP12.3□□□□□ -0.44
SIL1-206ENST00000505353 ZNF330Q9Y3S2 320 aaPredicted RBP12.3□□□□□ -0.44
SIL1-206ENST00000505353 MAP3K15Q6ZN16 1313 aa12.3□□□□□ -0.44
SIL1-206ENST00000505353 MYL6BP14649 208 aa12.29□□□□□ -0.44
SIL1-206ENST00000505353 TSR2Q969E8 191 aaKnown RBP12.29□□□□□ -0.44
SIL1-206ENST00000505353 A0A0G2JLW4 131 aa12.28□□□□□ -0.44
SIL1-206ENST00000505353 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
SIL1-206ENST00000505353 CHPF2Q9P2E5 772 aa12.28□□□□□ -0.44
SIL1-206ENST00000505353 CARMIL3Q8ND23 1372 aa12.28□□□□□ -0.44
SIL1-206ENST00000505353 NUP98P52948 1817 aa12.27□□□□□ -0.44
SIL1-206ENST00000505353 BRCA1P38398 1863 aaKnown RBP12.27□□□□□ -0.44
SIL1-206ENST00000505353 ELL2O00472 640 aaPredicted RBP12.27□□□□□ -0.45
SIL1-206ENST00000505353 DPEP1P16444 411 aa12.27□□□□□ -0.45
SIL1-206ENST00000505353 HDGFL1Q5TGJ6 251 aa12.27□□□□□ -0.45
SIL1-206ENST00000505353 PRR5LQ6MZQ0 368 aa12.27□□□□□ -0.45
SIL1-206ENST00000505353 GIGYF2Q6Y7W6 1299 aaKnown RBP12.27□□□□□ -0.45
SIL1-206ENST00000505353 BICDL1Q6ZP65 573 aa12.27□□□□□ -0.45
SIL1-206ENST00000505353 COPS6Q7L5N1 327 aa12.27□□□□□ -0.45
SIL1-206ENST00000505353 ZNF34Q8IZ26 560 aa12.27□□□□□ -0.45
SIL1-206ENST00000505353 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
SIL1-206ENST00000505353 SETDB2Q96T68 719 aa12.27□□□□□ -0.45
SIL1-206ENST00000505353 SALL2Q9Y467 1007 aaPredicted RBP12.27□□□□□ -0.45
SIL1-206ENST00000505353 N4BP2Q86UW6 1770 aaPredicted RBP12.27□□□□□ -0.45
SIL1-206ENST00000505353 ANKRD31Q8N7Z5 1873 aa12.26□□□□□ -0.45
SIL1-206ENST00000505353 KLRG2A4D1S0 409 aaPredicted RBP12.26□□□□□ -0.45
SIL1-206ENST00000505353 XAGE3Q8WTP9 111 aa12.26□□□□□ -0.45
SIL1-206ENST00000505353 DBF4Q9UBU7 674 aaPredicted RBP12.26□□□□□ -0.45
SIL1-206ENST00000505353 FANCIQ9NVI1 1328 aa12.26□□□□□ -0.45
SIL1-206ENST00000505353 ATP10DQ9P241 1426 aa12.26□□□□□ -0.45
SIL1-206ENST00000505353 VAMP4O75379 141 aa12.25□□□□□ -0.45
SIL1-206ENST00000505353 NPM2Q86SE8 214 aaKnown RBP12.25□□□□□ -0.45
SIL1-206ENST00000505353 BRIP1Q9BX63 1249 aa12.25□□□□□ -0.45
SIL1-206ENST00000505353 ZNF652Q9Y2D9 606 aa12.25□□□□□ -0.45
SIL1-206ENST00000505353 UBN2Q6ZU65 1347 aa12.25□□□□□ -0.45
SIL1-206ENST00000505353 CHRNA5P30532 468 aa12.24□□□□□ -0.45
SIL1-206ENST00000505353 GPR162Q16538 588 aa12.24□□□□□ -0.45
SIL1-206ENST00000505353 CCDC24Q8N4L8 307 aa12.24□□□□□ -0.45
SIL1-206ENST00000505353 ZBTB3Q9H5J0 574 aa12.24□□□□□ -0.45
SIL1-206ENST00000505353 NIP7Q9Y221 180 aaKnown RBP eCLIP12.24□□□□□ -0.45
SIL1-206ENST00000505353 SUSD4Q5VX71 490 aa12.23□□□□□ -0.45
SIL1-206ENST00000505353 TRMT2AQ8IZ69 625 aaKnown RBP12.23□□□□□ -0.45
SIL1-206ENST00000505353 PHAXQ9H814 394 aaKnown RBP12.23□□□□□ -0.45
SIL1-206ENST00000505353 HYPKQ9NX55 129 aa12.23□□□□□ -0.45
SIL1-206ENST00000505353 AIMP1Q12904 312 aaKnown RBP12.22□□□□□ -0.45
SIL1-206ENST00000505353 TCIRG1Q13488 830 aa12.22□□□□□ -0.45
SIL1-206ENST00000505353 TWISTNBQ3B726 338 aaPredicted RBP12.22□□□□□ -0.45
SIL1-206ENST00000505353 KIF6Q6ZMV9 814 aa12.22□□□□□ -0.45
SIL1-206ENST00000505353 ANKRD13DQ6ZTN6 518 aa12.22□□□□□ -0.45
SIL1-206ENST00000505353 PLBD2Q8NHP8 589 aa12.22□□□□□ -0.45
SIL1-206ENST00000505353 IBTKQ9P2D0 1353 aaPredicted RBP12.21□□□□□ -0.45
SIL1-206ENST00000505353 DLEC1Q9Y238 1755 aa12.21□□□□□ -0.45
SIL1-206ENST00000505353 GRIN3BO60391 1043 aa12.21□□□□□ -0.45
SIL1-206ENST00000505353 SRGNP10124 158 aa12.21□□□□□ -0.45
SIL1-206ENST00000505353 EXOSC9Q06265 439 aaKnown RBP12.21□□□□□ -0.45
SIL1-206ENST00000505353 GOLGA2Q08379 1002 aa12.21□□□□□ -0.45
SIL1-206ENST00000505353 SLFN5Q08AF3 891 aa12.21□□□□□ -0.45
SIL1-206ENST00000505353 TRIM28Q13263 835 aaKnown RBP12.21□□□□□ -0.45
SIL1-206ENST00000505353 CCDC30Q5VVM6 783 aa12.21□□□□□ -0.45
SIL1-206ENST00000505353 TPTE2Q6XPS3 522 aa12.21□□□□□ -0.45
SIL1-206ENST00000505353 NBPF5PQ86XG9 351 aaPredicted RBP12.21□□□□□ -0.45
SIL1-206ENST00000505353 CNBD1Q8NA66 436 aa12.21□□□□□ -0.45
SIL1-206ENST00000505353 ISCA1Q9BUE6 129 aa12.21□□□□□ -0.45
SIL1-206ENST00000505353 PIM2Q9P1W9 311 aa12.21□□□□□ -0.45
SIL1-206ENST00000505353 WWC3Q9ULE0 1092 aa12.21□□□□□ -0.45
SIL1-206ENST00000505353 CHD4Q14839 1912 aa12.2□□□□□ -0.46
SIL1-206ENST00000505353 NTSR2O95665 410 aa12.2□□□□□ -0.46
SIL1-206ENST00000505353 GPTP24298 496 aa12.2□□□□□ -0.46
SIL1-206ENST00000505353 SLC10A5Q5PT55 438 aa12.2□□□□□ -0.46
SIL1-206ENST00000505353 G2E3Q7L622 706 aa12.2□□□□□ -0.46
SIL1-206ENST00000505353 NLRP10Q86W26 655 aa12.2□□□□□ -0.46
SIL1-206ENST00000505353 CDCA7LQ96GN5 454 aa12.2□□□□□ -0.46
SIL1-206ENST00000505353 ABCC12Q96J65 1359 aa12.19□□□□□ -0.46
SIL1-206ENST00000505353 ARFGEF1Q9Y6D6 1849 aa12.19□□□□□ -0.46
SIL1-206ENST00000505353 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
SIL1-206ENST00000505353 PDE6BP35913 854 aa12.19□□□□□ -0.46
SIL1-206ENST00000505353 CRY2Q49AN0 593 aa12.19□□□□□ -0.46
SIL1-206ENST00000505353 PARP10Q53GL7 1025 aa12.19□□□□□ -0.46
SIL1-206ENST00000505353 NUTM1Q86Y26 1132 aa12.19□□□□□ -0.46
SIL1-206ENST00000505353 C2CD5Q86YS7 1000 aa12.19□□□□□ -0.46
SIL1-206ENST00000505353 C7orf43Q8WVR3 580 aa12.19□□□□□ -0.46
SIL1-206ENST00000505353 PDZRN3Q9UPQ7 1066 aa12.19□□□□□ -0.46
SIL1-206ENST00000505353 COL11A2P13942 1736 aaPredicted RBP12.19□□□□□ -0.46
SIL1-206ENST00000505353 RIC1Q4ADV7 1423 aa12.19□□□□□ -0.46
SIL1-206ENST00000505353 ANKRD36CQ5JPF3 1778 aa12.18□□□□□ -0.46
SIL1-206ENST00000505353 H0YIN7 160 aa12.18□□□□□ -0.46
SIL1-206ENST00000505353 TCERG1O14776 1098 aaKnown RBP12.18□□□□□ -0.46
SIL1-206ENST00000505353 ERFEQ4G0M1 354 aa12.18□□□□□ -0.46
SIL1-206ENST00000505353 PELP1Q8IZL8 1130 aaKnown RBP12.18□□□□□ -0.46
SIL1-206ENST00000505353 SYNE4Q8N205 404 aa12.18□□□□□ -0.46
SIL1-206ENST00000505353 CHMP4AQ9BY43 222 aa12.18□□□□□ -0.46
SIL1-206ENST00000505353 MYH16Q9H6N6 1097 aa12.18□□□□□ -0.46
SIL1-206ENST00000505353 BCS1LQ9Y276 419 aa12.18□□□□□ -0.46
SIL1-206ENST00000505353 CACNA1FO60840 1977 aa12.18□□□□□ -0.46
SIL1-206ENST00000505353 FAM177BA6PVY3 158 aa12.17□□□□□ -0.46
SIL1-206ENST00000505353 SLC4A2P04920 1241 aa12.17□□□□□ -0.46
SIL1-206ENST00000505353 ST5P78524 1137 aa12.17□□□□□ -0.46
SIL1-206ENST00000505353 HSP90AB3PQ58FF7 597 aa12.17□□□□□ -0.46
SIL1-206ENST00000505353 DALRD3Q5D0E6 543 aaKnown RBP12.17□□□□□ -0.46
SIL1-206ENST00000505353 STYK1Q6J9G0 422 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms