RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 HMGB1P1B2RPK0 211 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 TMEM229AB2RXF0 380 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 ENPP3O14638 875 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 TNFRSF10BO14763 440 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 STAU1O95793 577 aaKnown RBP4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 GJA8P48165 433 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 PPP4CP60510 307 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 PTPN12Q05209 780 aaKnown RBP4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 MEI1Q5TIA1 1274 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 BAP1Q92560 729 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 FOXJ1Q92949 421 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 MKL1Q969V6 931 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 ZFRQ96KR1 1074 aaKnown RBP4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 DEPDC7Q96QD5 511 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 SPSB2Q99619 263 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 SPOCK3Q9BQ16 436 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 SPON2Q9BUD6 331 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 ZNF408Q9H9D4 720 aa4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P22-201ENST00000505315 OPLAHO14841 1288 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 DXOO77932 396 aaKnown RBP4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 IGHA2P01877 340 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 PDGFAP04085 211 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 SCTRP47872 440 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 ODR4Q5SWX8 454 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 FERMT3Q86UX7 667 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 LAPTM4BQ86VI4 370 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 SLC9A9Q8IVB4 645 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 SEPT12Q8IYM1 358 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 GJD3Q8N144 294 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 APPBP2Q92624 585 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 PMM1Q92871 262 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 ANAPC16Q96DE5 110 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 THAP11Q96EK4 314 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 C12orf49Q9H741 205 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 COPRSQ9NQ92 184 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 PRDM9Q9NQV7 894 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 SNTG2Q9NY99 539 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 TCEAL9Q9UHQ7 104 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 PRR12Q9ULL5 1215 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 EFR3BQ9Y2G0 817 aa4.88□□□□□ -1.63
HMGB1P22-201ENST00000505315 MINDY4BA8MYZ0 360 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 PRC1O43663 620 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 CPNE3O75131 537 aaKnown RBP4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 ZPR1O75312 459 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 USP17L7P0C7H9 530 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 ZAP70P43403 619 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 IFRD2Q12894 506 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 BIRC2Q13490 618 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 SERINC3Q13530 473 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 MSS51Q4VC12 460 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 PTCRAQ6ISU1 281 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 KIAA0825Q8IV33 1275 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 RPUSD2Q8IZ73 545 aaKnown RBP4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 GPR152Q8TDT2 470 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 SH3TC2Q8TF17 1288 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 HNRNPLLQ8WVV9 542 aaKnown RBP4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 SEC16BQ96JE7 1060 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 CFHR5Q9BXR6 569 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 PCDH10Q9P2E7 1040 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 ZNF232Q9UNY5 417 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 ERBB3P21860 1342 aa4.87□□□□□ -1.63
HMGB1P22-201ENST00000505315 F6X3S4 739 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 PDGFRBP09619 1106 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 CNGA1P29973 690 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 ETFBP38117 255 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 GYS2P54840 703 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 PSMA6P60900 246 aaKnown RBP4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 AMPD3Q01432 767 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 OS9Q13438 667 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 DGKZQ13574 1117 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 PLEKHG4Q58EX7 1191 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 PI16Q6UXB8 463 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 APBB1IPQ7Z5R6 666 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 HOMER1Q86YM7 354 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 WDR75Q8IWA0 830 aaKnown RBP4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 SMC5Q8IY18 1101 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 MRPL50Q8N5N7 158 aaKnown RBP4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 FAM160A2Q8N612 972 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 KCTD15Q96SI1 283 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 C2orf49Q9BVC5 232 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 QTRT2Q9H974 415 aaKnown RBP4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 KBTBD4Q9NVX7 518 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 FAM8A1Q9UBU6 413 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 CDV3Q9UKY7 258 aaKnown RBP4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 LRFN2Q9ULH4 789 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 USP31Q70CQ4 1352 aa4.86□□□□□ -1.63
HMGB1P22-201ENST00000505315 FAM221BA6H8Z2 402 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 A6NHS1 94 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 GOLGA8CPA6NN73 597 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 ARHGAP33O14559 1287 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 GIPC1O14908 333 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 CREB3O43889 395 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 GADD45BO75293 160 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 EIF3JO75822 258 aaKnown RBP4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 GABBR2O75899 941 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 INHAP05111 366 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 HCLS1P14317 486 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 SCNN1DP51172 638 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 APLP1P51693 650 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms