RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 MTMR6Q9Y217 621 aa14.28□□□□□ -0.12
UBE3D-206ENST00000505226 GJB2P29033 226 aa14.28□□□□□ -0.12
UBE3D-206ENST00000505226 BEND3Q5T5X7 828 aa14.28□□□□□ -0.12
UBE3D-206ENST00000505226 SMC3Q9UQE7 1217 aa14.28□□□□□ -0.12
UBE3D-206ENST00000505226 KCNQ3O43525 872 aa14.28□□□□□ -0.12
UBE3D-206ENST00000505226 NLRP6P59044 892 aa14.28□□□□□ -0.12
UBE3D-206ENST00000505226 DNTTIP2Q5QJE6 756 aaKnown RBP14.28□□□□□ -0.12
UBE3D-206ENST00000505226 CNTROBQ8N137 903 aa14.28□□□□□ -0.12
UBE3D-206ENST00000505226 PRDM4Q9UKN5 801 aa14.28□□□□□ -0.12
UBE3D-206ENST00000505226 PI4KAP2A4QPH2 592 aa14.27□□□□□ -0.13
UBE3D-206ENST00000505226 PI4KAP1Q8N8J0 262 aa14.27□□□□□ -0.13
UBE3D-206ENST00000505226 KCNF1Q9H3M0 494 aa14.27□□□□□ -0.13
UBE3D-206ENST00000505226 CHPF2Q9P2E5 772 aa14.27□□□□□ -0.13
UBE3D-206ENST00000505226 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.27□□□□□ -0.13
UBE3D-206ENST00000505226 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.27□□□□□ -0.13
UBE3D-206ENST00000505226 CRYBG1Q9Y4K1 1723 aa14.27□□□□□ -0.13
UBE3D-206ENST00000505226 LGR6Q9HBX8 967 aa14.26□□□□□ -0.13
UBE3D-206ENST00000505226 SPTLC3Q9NUV7 552 aa14.26□□□□□ -0.13
UBE3D-206ENST00000505226 PRPF40BQ6NWY9 871 aaKnown RBP14.26□□□□□ -0.13
UBE3D-206ENST00000505226 NECAB1Q8N987 351 aa14.26□□□□□ -0.13
UBE3D-206ENST00000505226 ESF1Q9H501 851 aaKnown RBP14.26□□□□□ -0.13
UBE3D-206ENST00000505226 AMOTL2Q9Y2J4 779 aa14.26□□□□□ -0.13
UBE3D-206ENST00000505226 PLCB2Q00722 1185 aa14.26□□□□□ -0.13
UBE3D-206ENST00000505226 ME3Q16798 604 aa14.26□□□□□ -0.13
UBE3D-206ENST00000505226 JAKMIP1Q96N16 626 aaKnown RBP14.26□□□□□ -0.13
UBE3D-206ENST00000505226 PYCARDQ9ULZ3 195 aa14.25□□□□□ -0.13
UBE3D-206ENST00000505226 USP42Q9H9J4 1324 aaKnown RBP14.25□□□□□ -0.13
UBE3D-206ENST00000505226 EIF4A1P60842 406 aaKnown RBP14.25□□□□□ -0.13
UBE3D-206ENST00000505226 PLEKHG1Q9ULL1 1385 aa14.25□□□□□ -0.13
UBE3D-206ENST00000505226 LETM1O95202 739 aaPredicted RBP14.25□□□□□ -0.13
UBE3D-206ENST00000505226 FAM173BQ6P4H8 233 aa14.25□□□□□ -0.13
UBE3D-206ENST00000505226 ZSWIM6Q9HCJ5 1215 aa14.25□□□□□ -0.13
UBE3D-206ENST00000505226 PDRG1Q9NUG6 133 aa14.25□□□□□ -0.13
UBE3D-206ENST00000505226 DNAAF4Q8WXU2 420 aa14.24□□□□□ -0.13
UBE3D-206ENST00000505226 PA2G4Q9UQ80 394 aaKnown RBP14.24□□□□□ -0.13
UBE3D-206ENST00000505226 MARF1Q9Y4F3 1742 aaKnown RBP14.24□□□□□ -0.13
UBE3D-206ENST00000505226 ADCY9O60503 1353 aa14.24□□□□□ -0.13
UBE3D-206ENST00000505226 BABAM1Q9NWV8 329 aa14.24□□□□□ -0.13
UBE3D-206ENST00000505226 GTF2F1P35269 517 aaKnown RBP eCLIP14.23□□□□□ -0.13
UBE3D-206ENST00000505226 NECTIN1Q15223 517 aa14.23□□□□□ -0.13
UBE3D-206ENST00000505226 VPS53Q5VIR6 699 aa14.23□□□□□ -0.13
UBE3D-206ENST00000505226 TPCN1Q9ULQ1 816 aa14.23□□□□□ -0.13
UBE3D-206ENST00000505226 KCNB2Q92953 911 aa14.23□□□□□ -0.13
UBE3D-206ENST00000505226 PRIMPOLQ96LW4 560 aa14.23□□□□□ -0.13
UBE3D-206ENST00000505226 DIAPH3Q9NSV4 1193 aa14.23□□□□□ -0.13
UBE3D-206ENST00000505226 TAF6LQ9Y6J9 622 aa14.23□□□□□ -0.13
UBE3D-206ENST00000505226 CEMIPQ8WUJ3 1361 aa14.23□□□□□ -0.13
UBE3D-206ENST00000505226 VPS37CA5D8V6 355 aaPredicted RBP14.23□□□□□ -0.13
UBE3D-206ENST00000505226 GLRX3O76003 335 aaKnown RBP14.23□□□□□ -0.13
UBE3D-206ENST00000505226 HMGN5P82970 282 aaKnown RBP14.23□□□□□ -0.13
UBE3D-206ENST00000505226 SPC24Q8NBT2 197 aa14.23□□□□□ -0.13
UBE3D-206ENST00000505226 KIAA1524Q8TCG1 905 aa14.23□□□□□ -0.13
UBE3D-206ENST00000505226 PRDM10Q9NQV6 1147 aa14.23□□□□□ -0.13
UBE3D-206ENST00000505226 MTERF4Q7Z6M4 381 aaKnown RBP14.22□□□□□ -0.13
UBE3D-206ENST00000505226 TTC6Q86TZ1 520 aa14.22□□□□□ -0.13
UBE3D-206ENST00000505226 CHMP3Q9Y3E7 222 aa14.22□□□□□ -0.13
UBE3D-206ENST00000505226 FAM227BQ96M60 508 aa14.22□□□□□ -0.13
UBE3D-206ENST00000505226 TTC41PQ6P2S7 1318 aa14.22□□□□□ -0.13
UBE3D-206ENST00000505226 LIG1P18858 919 aa14.21□□□□□ -0.13
UBE3D-206ENST00000505226 FERMT3Q86UX7 667 aa14.21□□□□□ -0.13
UBE3D-206ENST00000505226 ATP6V1DQ9Y5K8 247 aa14.21□□□□□ -0.13
UBE3D-206ENST00000505226 DIP2AQ14689 1571 aa14.21□□□□□ -0.13
UBE3D-206ENST00000505226 OS9Q13438 667 aaPredicted RBP14.21□□□□□ -0.13
UBE3D-206ENST00000505226 CDC37L1Q7L3B6 337 aa14.21□□□□□ -0.13
UBE3D-206ENST00000505226 TCEANC2Q96MN5 208 aa14.21□□□□□ -0.13
UBE3D-206ENST00000505226 CCDC94Q9BW85 323 aaPredicted RBP14.21□□□□□ -0.13
UBE3D-206ENST00000505226 CEBPAP49715 358 aaPredicted RBP14.21□□□□□ -0.14
UBE3D-206ENST00000505226 CAMK4Q16566 473 aa14.21□□□□□ -0.14
UBE3D-206ENST00000505226 CYP46A1Q9Y6A2 500 aa14.21□□□□□ -0.14
UBE3D-206ENST00000505226 PROSER3Q2NL68 480 aa14.2□□□□□ -0.14
UBE3D-206ENST00000505226 TM6SF1Q9BZW5 370 aa14.2□□□□□ -0.14
UBE3D-206ENST00000505226 ECHDC1Q9NTX5 307 aa14.2□□□□□ -0.14
UBE3D-206ENST00000505226 NBPF6Q5VWK0 638 aa14.2□□□□□ -0.14
UBE3D-206ENST00000505226 NBPF4Q96M43 638 aa14.2□□□□□ -0.14
UBE3D-206ENST00000505226 RBM8AQ9Y5S9 174 aaKnown RBP14.2□□□□□ -0.14
UBE3D-206ENST00000505226 CCDC171Q6TFL3 1326 aa14.19□□□□□ -0.14
UBE3D-206ENST00000505226 MTX1Q13505 466 aa14.19□□□□□ -0.14
UBE3D-206ENST00000505226 CREB3L3Q68CJ9 461 aa14.19□□□□□ -0.14
UBE3D-206ENST00000505226 CWF19L2Q2TBE0 894 aaKnown RBP14.19□□□□□ -0.14
UBE3D-206ENST00000505226 CLASRPQ8N2M8 674 aaKnown RBP14.19□□□□□ -0.14
UBE3D-206ENST00000505226 ABTB2Q8N961 1025 aa14.19□□□□□ -0.14
UBE3D-206ENST00000505226 MRVI1Q9Y6F6 885 aa14.19□□□□□ -0.14
UBE3D-206ENST00000505226 LUZP1Q86V48 1076 aa14.19□□□□□ -0.14
UBE3D-206ENST00000505226 ZSCAN31Q96LW9 406 aaPredicted RBP14.19□□□□□ -0.14
UBE3D-206ENST00000505226 BCL2L12Q9HB09 334 aa14.19□□□□□ -0.14
UBE3D-206ENST00000505226 SH2B1Q9NRF2 756 aaPredicted RBP14.19□□□□□ -0.14
UBE3D-206ENST00000505226 PRAMEF22A3QJZ6 481 aa14.18□□□□□ -0.14
UBE3D-206ENST00000505226 LARP1BQ659C4 914 aaKnown RBP14.18□□□□□ -0.14
UBE3D-206ENST00000505226 NMIQ13287 307 aaPredicted RBP14.18□□□□□ -0.14
UBE3D-206ENST00000505226 HSP90AB4PQ58FF6 505 aa14.18□□□□□ -0.14
UBE3D-206ENST00000505226 SMAP1Q8IYB5 467 aaPredicted RBP14.18□□□□□ -0.14
UBE3D-206ENST00000505226 RUFY2Q8WXA3 655 aa14.18□□□□□ -0.14
UBE3D-206ENST00000505226 MAP4K1Q92918 833 aa14.18□□□□□ -0.14
UBE3D-206ENST00000505226 KAZALD1Q96I82 304 aa14.18□□□□□ -0.14
UBE3D-206ENST00000505226 TLR7Q9NYK1 1049 aaKnown RBP14.18□□□□□ -0.14
UBE3D-206ENST00000505226 MED1Q15648 1581 aaPredicted RBP14.18□□□□□ -0.14
UBE3D-206ENST00000505226 SETD1BQ9UPS6 1966 aaKnown RBP14.17□□□□□ -0.14
UBE3D-206ENST00000505226 SASH1O94885 1247 aa14.17□□□□□ -0.14
UBE3D-206ENST00000505226 ATP2B3Q16720 1220 aa14.17□□□□□ -0.14
UBE3D-206ENST00000505226 AACSQ86V21 672 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms