RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 NUP98P52948 1817 aa33.19■■■□□ 2.9
PVT1-201ENST00000504719 HLFQ16534 295 aa33.19■■■□□ 2.9
PVT1-201ENST00000504719 NGEFQ8N5V2 710 aa33.19■■■□□ 2.9
PVT1-201ENST00000504719 ERBB4Q15303 1308 aa33.19■■■□□ 2.9
PVT1-201ENST00000504719 CHL1O00533 1208 aa33.18■■■□□ 2.9
PVT1-201ENST00000504719 CCDC184Q52MB2 194 aa33.18■■■□□ 2.9
PVT1-201ENST00000504719 TTLL6Q8N841 843 aa33.18■■■□□ 2.9
PVT1-201ENST00000504719 COL11A2P13942 1736 aaPredicted RBP33.17■■■□□ 2.9
PVT1-201ENST00000504719 MYL6BP14649 208 aa33.17■■■□□ 2.9
PVT1-201ENST00000504719 ST5P78524 1137 aa33.17■■■□□ 2.9
PVT1-201ENST00000504719 NIP7Q9Y221 180 aaKnown RBP eCLIP33.17■■■□□ 2.9
PVT1-201ENST00000504719 SBF1O95248 1867 aa33.16■■■□□ 2.9
PVT1-201ENST00000504719 ERVV-1B6SEH8 477 aa33.16■■■□□ 2.9
PVT1-201ENST00000504719 NPHP1O15259 732 aa33.16■■■□□ 2.9
PVT1-201ENST00000504719 NBPF5PQ86XG9 351 aaPredicted RBP33.16■■■□□ 2.9
PVT1-201ENST00000504719 TTLL7Q6ZT98 887 aa33.15■■■□□ 2.9
PVT1-201ENST00000504719 MAP3K15Q6ZN16 1313 aa33.14■■■□□ 2.9
PVT1-201ENST00000504719 EIF2S2P20042 333 aaKnown RBP33.14■■■□□ 2.9
PVT1-201ENST00000504719 GPBP1L1Q9HC44 474 aaPredicted RBP33.14■■■□□ 2.9
PVT1-201ENST00000504719 LAS1LQ9Y4W2 734 aaKnown RBP33.14■■■□□ 2.9
PVT1-201ENST00000504719 KIF6Q6ZMV9 814 aa33.13■■■□□ 2.89
PVT1-201ENST00000504719 APAF1O14727 1248 aa33.12■■■□□ 2.89
PVT1-201ENST00000504719 C1QTNF8P60827 252 aa33.12■■■□□ 2.89
PVT1-201ENST00000504719 PDIA6Q15084 440 aa33.12■■■□□ 2.89
PVT1-201ENST00000504719 ZNF526Q8TF50 670 aaPredicted RBP33.12■■■□□ 2.89
PVT1-201ENST00000504719 ZNF622Q969S3 477 aaKnown RBP eCLIP33.12■■■□□ 2.89
PVT1-201ENST00000504719 C9orf131Q5VYM1 1079 aa33.11■■■□□ 2.89
PVT1-201ENST00000504719 TPTE2Q6XPS3 522 aa33.11■■■□□ 2.89
PVT1-201ENST00000504719 LRP10Q7Z4F1 713 aa33.11■■■□□ 2.89
PVT1-201ENST00000504719 KRT24Q2M2I5 525 aa33.08■■■□□ 2.89
PVT1-201ENST00000504719 CFAP44Q96MT7 982 aa33.08■■■□□ 2.89
PVT1-201ENST00000504719 MRS2Q9HD23 443 aa33.08■■■□□ 2.89
PVT1-201ENST00000504719 CACNA1SQ13698 1873 aa33.08■■■□□ 2.89
PVT1-201ENST00000504719 FAM177BA6PVY3 158 aa33.07■■■□□ 2.88
PVT1-201ENST00000504719 SRGNP10124 158 aa33.07■■■□□ 2.88
PVT1-201ENST00000504719 ZBTB3Q9H5J0 574 aa33.07■■■□□ 2.88
PVT1-201ENST00000504719 PROSER3Q2NL68 480 aa33.06■■■□□ 2.88
PVT1-201ENST00000504719 STYK1Q6J9G0 422 aa33.06■■■□□ 2.88
PVT1-201ENST00000504719 ARFGEF2Q9Y6D5 1785 aa33.06■■■□□ 2.88
PVT1-201ENST00000504719 SLX4Q8IY92 1834 aa33.05■■■□□ 2.88
PVT1-201ENST00000504719 RASSF7Q02833 373 aa33.05■■■□□ 2.88
PVT1-201ENST00000504719 NECTIN2Q92692 538 aa33.05■■■□□ 2.88
PVT1-201ENST00000504719 MASTLQ96GX5 879 aa33.05■■■□□ 2.88
PVT1-201ENST00000504719 RNF181Q9P0P0 153 aa33.05■■■□□ 2.88
PVT1-201ENST00000504719 CCDC88AQ3V6T2 1871 aa33.05■■■□□ 2.88
PVT1-201ENST00000504719 KLRG2A4D1S0 409 aaPredicted RBP33.04■■■□□ 2.88
PVT1-201ENST00000504719 ANXA1P04083 346 aa33.04■■■□□ 2.88
PVT1-201ENST00000504719 GIGYF2Q6Y7W6 1299 aaKnown RBP33.04■■■□□ 2.88
PVT1-201ENST00000504719 CNKSR1Q969H4 720 aa33.04■■■□□ 2.88
PVT1-201ENST00000504719 ZNF853P0CG23 659 aa33.03■■■□□ 2.88
PVT1-201ENST00000504719 NYXQ9GZU5 481 aa33.02■■■□□ 2.88
PVT1-201ENST00000504719 MBIPQ9NS73 344 aa33.02■■■□□ 2.88
PVT1-201ENST00000504719 FER1L6Q2WGJ9 1857 aa33.01■■■□□ 2.88
PVT1-201ENST00000504719 HOXB7P09629 217 aa33.01■■■□□ 2.87
PVT1-201ENST00000504719 ZNF34Q8IZ26 560 aa33.01■■■□□ 2.87
PVT1-201ENST00000504719 UBN2Q6ZU65 1347 aa33.01■■■□□ 2.87
PVT1-201ENST00000504719 C21orf2O43822 256 aa33■■■□□ 2.87
PVT1-201ENST00000504719 GPTP24298 496 aa33■■■□□ 2.87
PVT1-201ENST00000504719 GTF2E1P29083 439 aaPredicted RBP33■■■□□ 2.87
PVT1-201ENST00000504719 DDX21Q9NR30 783 aaKnown RBP eCLIP33■■■□□ 2.87
PVT1-201ENST00000504719 IFT57Q9NWB7 429 aa33■■■□□ 2.87
PVT1-201ENST00000504719 PRELPP51888 382 aa32.99■■■□□ 2.87
PVT1-201ENST00000504719 CALD1Q05682 793 aaKnown RBP32.99■■■□□ 2.87
PVT1-201ENST00000504719 ZNF219Q9P2Y4 722 aaPredicted RBP32.99■■■□□ 2.87
PVT1-201ENST00000504719 IBTKQ9P2D0 1353 aaPredicted RBP32.98■■■□□ 2.87
PVT1-201ENST00000504719 NFKBIEO00221 500 aa32.98■■■□□ 2.87
PVT1-201ENST00000504719 NPR1P16066 1061 aa32.98■■■□□ 2.87
PVT1-201ENST00000504719 LMNB1P20700 586 aa32.98■■■□□ 2.87
PVT1-201ENST00000504719 PRPF40BQ6NWY9 871 aaKnown RBP32.98■■■□□ 2.87
PVT1-201ENST00000504719 COPS6Q7L5N1 327 aa32.98■■■□□ 2.87
PVT1-201ENST00000504719 TNRC6CQ9HCJ0 1690 aaKnown RBP32.97■■■□□ 2.87
PVT1-201ENST00000504719 KIF3CO14782 793 aa32.97■■■□□ 2.87
PVT1-201ENST00000504719 GNAI1P63096 354 aa32.97■■■□□ 2.87
PVT1-201ENST00000504719 SUSD4Q5VX71 490 aa32.97■■■□□ 2.87
PVT1-201ENST00000504719 NUTM1Q86Y26 1132 aa32.97■■■□□ 2.87
PVT1-201ENST00000504719 HDGFL1Q5TGJ6 251 aa32.96■■■□□ 2.87
PVT1-201ENST00000504719 DUSP27Q5VZP5 1158 aa32.96■■■□□ 2.87
PVT1-201ENST00000504719 XAGE3Q8WTP9 111 aa32.96■■■□□ 2.87
PVT1-201ENST00000504719 ANKRD36CQ5JPF3 1778 aa32.96■■■□□ 2.87
PVT1-201ENST00000504719 ABCC12Q96J65 1359 aa32.96■■■□□ 2.87
PVT1-201ENST00000504719 AIMP1Q12904 312 aaKnown RBP32.95■■■□□ 2.87
PVT1-201ENST00000504719 ERFEQ4G0M1 354 aa32.95■■■□□ 2.87
PVT1-201ENST00000504719 CHPF2Q9P2E5 772 aa32.95■■■□□ 2.87
PVT1-201ENST00000504719 DICER1Q9UPY3 1922 aaKnown RBP32.93■■■□□ 2.86
PVT1-201ENST00000504719 NTSR2O95665 410 aa32.93■■■□□ 2.86
PVT1-201ENST00000504719 PARP10Q53GL7 1025 aa32.93■■■□□ 2.86
PVT1-201ENST00000504719 PPP1R42Q7Z4L9 355 aa32.92■■■□□ 2.86
PVT1-201ENST00000504719 ZC3H4Q9UPT8 1303 aaKnown RBP32.92■■■□□ 2.86
PVT1-201ENST00000504719 RIC1Q4ADV7 1423 aa32.92■■■□□ 2.86
PVT1-201ENST00000504719 SOGA3Q5TF21 947 aa32.91■■■□□ 2.86
PVT1-201ENST00000504719 C7orf43Q8WVR3 580 aa32.91■■■□□ 2.86
PVT1-201ENST00000504719 NMRK2Q9NPI5 230 aa32.91■■■□□ 2.86
PVT1-201ENST00000504719 DBF4Q9UBU7 674 aaPredicted RBP32.91■■■□□ 2.86
PVT1-201ENST00000504719 TIAM2Q8IVF5 1701 aa32.91■■■□□ 2.86
PVT1-201ENST00000504719 CRY2Q49AN0 593 aa32.9■■■□□ 2.86
PVT1-201ENST00000504719 LTBP3Q9NS15 1303 aa32.9■■■□□ 2.86
PVT1-201ENST00000504719 CCDC27Q2M243 656 aa32.89■■■□□ 2.86
PVT1-201ENST00000504719 HSP90AB3PQ58FF7 597 aa32.89■■■□□ 2.86
PVT1-201ENST00000504719 KDM2BQ8NHM5 1336 aa32.88■■■□□ 2.85
PVT1-201ENST00000504719 SENP3-EIF4A1A0A087X0R7 540 aa32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms