RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 CCAR2Q8N163 923 aaKnown RBP7□□□□□ -1.29
LINC01340-201ENST00000504012 GPR161Q8N6U8 529 aaKnown RBP7□□□□□ -1.29
LINC01340-201ENST00000504012 HNRNPLLQ8WVV9 542 aaKnown RBP7□□□□□ -1.29
LINC01340-201ENST00000504012 RTF1Q92541 710 aaKnown RBP7□□□□□ -1.29
LINC01340-201ENST00000504012 DDX11Q96FC9 970 aa7□□□□□ -1.29
LINC01340-201ENST00000504012 PAIP2Q9BPZ3 127 aaKnown RBP7□□□□□ -1.29
LINC01340-201ENST00000504012 ORC3Q9UBD5 711 aaPredicted RBP7□□□□□ -1.29
LINC01340-201ENST00000504012 TRAK1Q9UPV9 953 aa7□□□□□ -1.29
LINC01340-201ENST00000504012 RIPOR2Q9Y4F9 1068 aa7□□□□□ -1.29
LINC01340-201ENST00000504012 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7□□□□□ -1.29
LINC01340-201ENST00000504012 NOS1P29475 1434 aa7□□□□□ -1.29
LINC01340-201ENST00000504012 PBRM1Q86U86 1689 aa7□□□□□ -1.29
LINC01340-201ENST00000504012 MED14O60244 1454 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 PIK3R4Q99570 1358 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 NESP48681 1621 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 GADD45BO75293 160 aaPredicted RBP6.99□□□□□ -1.29
LINC01340-201ENST00000504012 PPFIA4O75335 1185 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 IPO7O95373 1038 aaKnown RBP6.99□□□□□ -1.29
LINC01340-201ENST00000504012 TBC1D8O95759 1140 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 TUBBP07437 444 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 SF3B2Q13435 895 aaKnown RBP6.99□□□□□ -1.29
LINC01340-201ENST00000504012 CRYMQ14894 314 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 SART3Q15020 963 aaKnown RBP6.99□□□□□ -1.29
LINC01340-201ENST00000504012 BRD3Q15059 726 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 ALDH1L2Q3SY69 923 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 DNAJC21Q5F1R6 531 aaKnown RBP6.99□□□□□ -1.29
LINC01340-201ENST00000504012 LRRC8AQ8IWT6 810 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 UBXN4Q92575 508 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 ARHGAP45Q92619 1136 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 MIEF2Q96C03 454 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 TMX3Q96JJ7 454 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 GNL3LQ9NVN8 582 aaKnown RBP6.99□□□□□ -1.29
LINC01340-201ENST00000504012 IMPACTQ9P2X3 320 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 CLIP2Q9UDT6 1046 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 MRVI1Q9Y6F6 885 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 PHLPP2Q6ZVD8 1323 aa6.99□□□□□ -1.29
LINC01340-201ENST00000504012 ABCC11Q96J66 1382 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 ABCA10Q8WWZ4 1543 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 ANKRD18BA2A2Z9 1011 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 HMGB1P1B2RPK0 211 aaPredicted RBP6.98□□□□□ -1.29
LINC01340-201ENST00000504012 MAP2K7O14733 419 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 POLR3GO15318 223 aaPredicted RBP6.98□□□□□ -1.29
LINC01340-201ENST00000504012 TRIM27P14373 513 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 CASTP20810 708 aaKnown RBP6.98□□□□□ -1.29
LINC01340-201ENST00000504012 ADCY2Q08462 1091 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 TRAF1Q13077 416 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 NEDD9Q14511 834 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 ERCC6LQ2NKX8 1250 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 ARHGAP29Q52LW3 1261 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 RBM43Q6ZSC3 357 aaKnown RBP6.98□□□□□ -1.29
LINC01340-201ENST00000504012 CCDC146Q8IYE0 955 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 SPC24Q8NBT2 197 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 CACTINQ8WUQ7 758 aaKnown RBP6.98□□□□□ -1.29
LINC01340-201ENST00000504012 TATDN2Q93075 761 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 FBXW7Q969H0 707 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 MKL1Q969V6 931 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 LNPKQ9C0E8 428 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 ARFGAP3Q9NP61 516 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 TTC41PQ6P2S7 1318 aa6.98□□□□□ -1.29
LINC01340-201ENST00000504012 ATXN2Q99700 1313 aaKnown RBP6.98□□□□□ -1.29
LINC01340-201ENST00000504012 RNF17Q9BXT8 1623 aaKnown RBP6.98□□□□□ -1.29
LINC01340-201ENST00000504012 POTEB2H3BUK9 544 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 U2SURPO15042 1029 aaKnown RBP6.97□□□□□ -1.29
LINC01340-201ENST00000504012 RGL2O15211 777 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 TADA3O75528 432 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 GCFC2P16383 781 aaKnown RBP6.97□□□□□ -1.29
LINC01340-201ENST00000504012 LMAN1P49257 510 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 MRPL12P52815 198 aaKnown RBP6.97□□□□□ -1.29
LINC01340-201ENST00000504012 GRIK3Q13003 919 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 FLIIQ13045 1269 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 SETDB1Q15047 1291 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 LRRFIP1Q32MZ4 808 aaKnown RBP6.97□□□□□ -1.29
LINC01340-201ENST00000504012 TTC22Q5TAA0 569 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 ANKRD45Q5TZF3 282 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 C9orf84Q5VXU9 1444 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 CC2D1AQ6P1N0 951 aaPredicted RBP6.97□□□□□ -1.29
LINC01340-201ENST00000504012 BARGINQ6ZT62 677 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 ANKRD18AQ8IVF6 992 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 DRC7Q8IY82 874 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 TEX11Q8IYF3 940 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 MICALL1Q8N3F8 863 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 MPNDQ8N594 471 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 GIMAP7Q8NHV1 300 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 ZC3H15Q8WU90 426 aaKnown RBP6.97□□□□□ -1.29
LINC01340-201ENST00000504012 ERCC4Q92889 916 aaPredicted RBP6.97□□□□□ -1.29
LINC01340-201ENST00000504012 FAXDC2Q96IV6 333 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 SPATA32Q96LK8 384 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 SH3GL3Q99963 347 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 THUMPD2Q9BTF0 503 aaKnown RBP6.97□□□□□ -1.29
LINC01340-201ENST00000504012 FUT8Q9BYC5 575 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 SLC24A3Q9HC58 644 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 TNNQ9UQP3 1299 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 SSUH2Q9Y2M2 353 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 SYNJ2O15056 1496 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 SHANK2Q9UPX8 1470 aa6.97□□□□□ -1.29
LINC01340-201ENST00000504012 CROCC2H7BZ55 1655 aa6.96□□□□□ -1.29
LINC01340-201ENST00000504012 DISP1Q96F81 1524 aa6.96□□□□□ -1.29
LINC01340-201ENST00000504012 DNMBPQ6XZF7 1577 aa6.96□□□□□ -1.29
LINC01340-201ENST00000504012 RGS12O14924 1447 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 SSH2Q76I76 1423 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms