RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 SCNN1AP37088 669 aa10.81□□□□□ -0.68
NIPBL-203ENST00000503274 IRF7Q92985 503 aa10.81□□□□□ -0.68
NIPBL-203ENST00000503274 MYO19Q96H55 970 aa10.81□□□□□ -0.68
NIPBL-203ENST00000503274 GJA3Q9Y6H8 435 aa10.81□□□□□ -0.68
NIPBL-203ENST00000503274 THBS1P07996 1170 aa10.8□□□□□ -0.68
NIPBL-203ENST00000503274 PDIA4P13667 645 aaKnown RBP10.8□□□□□ -0.68
NIPBL-203ENST00000503274 NAA30Q147X3 362 aaPredicted RBP10.8□□□□□ -0.68
NIPBL-203ENST00000503274 C16orf46Q6P387 395 aa10.8□□□□□ -0.68
NIPBL-203ENST00000503274 ANKIB1Q9P2G1 1089 aa10.8□□□□□ -0.68
NIPBL-203ENST00000503274 HIF1AQ16665 826 aa10.79□□□□□ -0.68
NIPBL-203ENST00000503274 COX20Q5RI15 118 aa10.79□□□□□ -0.68
NIPBL-203ENST00000503274 LRRC69Q6ZNQ3 347 aa10.79□□□□□ -0.68
NIPBL-203ENST00000503274 SEPT3Q9UH03 358 aa10.79□□□□□ -0.68
NIPBL-203ENST00000503274 BRD1O95696 1058 aa10.78□□□□□ -0.68
NIPBL-203ENST00000503274 FOXR1Q6PIV2 292 aa10.78□□□□□ -0.68
NIPBL-203ENST00000503274 FIGNL1Q6PIW4 674 aa10.78□□□□□ -0.68
NIPBL-203ENST00000503274 GTPBP3Q969Y2 492 aaKnown RBP10.78□□□□□ -0.68
NIPBL-203ENST00000503274 KLRG1Q96E93 195 aa10.78□□□□□ -0.68
NIPBL-203ENST00000503274 SUSD3Q96L08 255 aa10.78□□□□□ -0.68
NIPBL-203ENST00000503274 ZCCHC2Q9C0B9 1178 aaKnown RBP10.78□□□□□ -0.68
NIPBL-203ENST00000503274 SAP130Q9H0E3 1048 aa10.78□□□□□ -0.68
NIPBL-203ENST00000503274 LRFN2Q9ULH4 789 aa10.78□□□□□ -0.68
NIPBL-203ENST00000503274 MTMR7Q9Y216 660 aa10.78□□□□□ -0.68
NIPBL-203ENST00000503274 VSIG8P0DPA2 414 aa10.77□□□□□ -0.69
NIPBL-203ENST00000503274 ARID4AP29374 1257 aaPredicted RBP10.77□□□□□ -0.69
NIPBL-203ENST00000503274 DGKZQ13574 1117 aa10.77□□□□□ -0.69
NIPBL-203ENST00000503274 UBAP2LQ14157 1087 aaKnown RBP10.77□□□□□ -0.69
NIPBL-203ENST00000503274 C11orf91Q3C1V1 193 aa10.77□□□□□ -0.69
NIPBL-203ENST00000503274 KLK14Q9P0G3 267 aa10.77□□□□□ -0.69
NIPBL-203ENST00000503274 HOMEZQ8IX15 550 aa10.76□□□□□ -0.69
NIPBL-203ENST00000503274 ZNF280CQ8ND82 737 aa10.76□□□□□ -0.69
NIPBL-203ENST00000503274 HSH2DQ96JZ2 352 aa10.76□□□□□ -0.69
NIPBL-203ENST00000503274 FAM181BA6NEQ2 426 aa10.75□□□□□ -0.69
NIPBL-203ENST00000503274 SAMD5Q5TGI4 173 aa10.75□□□□□ -0.69
NIPBL-203ENST00000503274 GPR161Q8N6U8 529 aaKnown RBP10.75□□□□□ -0.69
NIPBL-203ENST00000503274 TRERF1Q96PN7 1200 aa10.75□□□□□ -0.69
NIPBL-203ENST00000503274 PCDHGC4Q9Y5F7 938 aa10.75□□□□□ -0.69
NIPBL-203ENST00000503274 ATXN7O15265 892 aaPredicted RBP10.74□□□□□ -0.69
NIPBL-203ENST00000503274 GTF3C2Q8WUA4 911 aaPredicted RBP10.74□□□□□ -0.69
NIPBL-203ENST00000503274 BCS1LQ9Y276 419 aa10.74□□□□□ -0.69
NIPBL-203ENST00000503274 TGFBR3LH3BV60 316 aa10.73□□□□□ -0.69
NIPBL-203ENST00000503274 GPR25O00155 361 aa10.73□□□□□ -0.69
NIPBL-203ENST00000503274 LORP23490 312 aaPredicted RBP10.73□□□□□ -0.69
NIPBL-203ENST00000503274 IFT43Q96FT9 208 aa10.73□□□□□ -0.69
NIPBL-203ENST00000503274 CFHR5Q9BXR6 569 aa10.73□□□□□ -0.69
NIPBL-203ENST00000503274 NDFIP2Q9NV92 336 aa10.73□□□□□ -0.69
NIPBL-203ENST00000503274 PHF24Q9UPV7 400 aa10.73□□□□□ -0.69
NIPBL-203ENST00000503274 BNIP3LO60238 219 aa10.72□□□□□ -0.69
NIPBL-203ENST00000503274 BRD2P25440 801 aaKnown RBP10.72□□□□□ -0.69
NIPBL-203ENST00000503274 IER5Q5VY09 327 aa10.72□□□□□ -0.69
NIPBL-203ENST00000503274 TXNDC2Q86VQ3 553 aa10.72□□□□□ -0.69
NIPBL-203ENST00000503274 TNFRSF10BO14763 440 aa10.71□□□□□ -0.69
NIPBL-203ENST00000503274 FAM157BP0CG42 384 aa10.71□□□□□ -0.69
NIPBL-203ENST00000503274 BTLAQ7Z6A9 289 aa10.71□□□□□ -0.69
NIPBL-203ENST00000503274 CCER1Q8TC90 406 aaPredicted RBP10.71□□□□□ -0.69
NIPBL-203ENST00000503274 HELQQ8TDG4 1101 aa10.71□□□□□ -0.69
NIPBL-203ENST00000503274 ABHD17AQ96GS6 310 aa10.71□□□□□ -0.69
NIPBL-203ENST00000503274 ATXN7L1Q9ULK2 861 aaPredicted RBP10.71□□□□□ -0.69
NIPBL-203ENST00000503274 DCDC2BA2VCK2 349 aa10.7□□□□□ -0.7
NIPBL-203ENST00000503274 KHNYNO15037 678 aaKnown RBP10.7□□□□□ -0.7
NIPBL-203ENST00000503274 TNP2Q05952 138 aa10.7□□□□□ -0.7
NIPBL-203ENST00000503274 ZSCAN1Q8NBB4 408 aa10.7□□□□□ -0.7
NIPBL-203ENST00000503274 CEP63Q96MT8 703 aa10.7□□□□□ -0.7
NIPBL-203ENST00000503274 STIM2Q9P246 746 aa10.7□□□□□ -0.7
NIPBL-203ENST00000503274 DMGDHQ9UI17 866 aaKnown RBP10.7□□□□□ -0.7
NIPBL-203ENST00000503274 DNMT3AQ9Y6K1 912 aaPredicted RBP10.7□□□□□ -0.7
NIPBL-203ENST00000503274 ABL1P00519 1130 aa10.69□□□□□ -0.7
NIPBL-203ENST00000503274 MAPTP10636 758 aaKnown RBP10.69□□□□□ -0.7
NIPBL-203ENST00000503274 EFSO43281 561 aa10.68□□□□□ -0.7
NIPBL-203ENST00000503274 MICAL2O94851 1124 aa10.68□□□□□ -0.7
NIPBL-203ENST00000503274 SERPINB4P48594 390 aa10.68□□□□□ -0.7
NIPBL-203ENST00000503274 TYRO3Q06418 890 aa10.68□□□□□ -0.7
NIPBL-203ENST00000503274 KCNA1Q09470 495 aa10.68□□□□□ -0.7
NIPBL-203ENST00000503274 ETFBKMTQ8IXQ9 262 aa10.68□□□□□ -0.7
NIPBL-203ENST00000503274 COL25A1Q9BXS0 654 aaPredicted RBP10.68□□□□□ -0.7
NIPBL-203ENST00000503274 GNEQ9Y223 722 aaKnown RBP10.68□□□□□ -0.7
NIPBL-203ENST00000503274 GAS6Q14393 721 aa10.67□□□□□ -0.7
NIPBL-203ENST00000503274 TREML1Q86YW5 311 aa10.67□□□□□ -0.7
NIPBL-203ENST00000503274 BRD7Q9NPI1 651 aa10.67□□□□□ -0.7
NIPBL-203ENST00000503274 EGFL7Q9UHF1 273 aa10.67□□□□□ -0.7
NIPBL-203ENST00000503274 FGFR3P22607 806 aa10.66□□□□□ -0.7
NIPBL-203ENST00000503274 IDH3AP50213 366 aa10.66□□□□□ -0.7
NIPBL-203ENST00000503274 FKBP4Q02790 459 aaKnown RBP eCLIP10.66□□□□□ -0.7
NIPBL-203ENST00000503274 ZNF211Q13398 564 aaPredicted RBP10.66□□□□□ -0.7
NIPBL-203ENST00000503274 SF3B2Q13435 895 aaKnown RBP10.66□□□□□ -0.7
NIPBL-203ENST00000503274 MTMR3Q13615 1198 aa10.66□□□□□ -0.7
NIPBL-203ENST00000503274 LAMC2Q13753 1193 aa10.66□□□□□ -0.7
NIPBL-203ENST00000503274 FAM26DQ5JW98 314 aa10.66□□□□□ -0.7
NIPBL-203ENST00000503274 KCTD17Q8N5Z5 321 aa10.66□□□□□ -0.7
NIPBL-203ENST00000503274 ABTB2Q8N961 1025 aa10.66□□□□□ -0.7
NIPBL-203ENST00000503274 ANO2Q9NQ90 1003 aa10.66□□□□□ -0.7
NIPBL-203ENST00000503274 PATL2C9JE40 543 aaKnown RBP10.65□□□□□ -0.7
NIPBL-203ENST00000503274 MX2P20592 715 aa10.65□□□□□ -0.7
NIPBL-203ENST00000503274 RNFT1Q5M7Z0 435 aa10.65□□□□□ -0.7
NIPBL-203ENST00000503274 AEBP1Q8IUX7 1158 aa10.65□□□□□ -0.7
NIPBL-203ENST00000503274 HCN2Q9UL51 889 aa10.65□□□□□ -0.7
NIPBL-203ENST00000503274 INPP5BP32019 993 aa10.64□□□□□ -0.71
NIPBL-203ENST00000503274 ARSDP51689 593 aa10.64□□□□□ -0.71
NIPBL-203ENST00000503274 SFSWAPQ12872 951 aaKnown RBP10.64□□□□□ -0.71
NIPBL-203ENST00000503274 STRN4Q9NRL3 753 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms