RNA–Protein interactions for RNA: ENST00000502501.1

PROM1-202, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-202ENST00000502501 KIF6Q6ZMV9 814 aa33.34■■■□□ 2.93
PROM1-202ENST00000502501 NUP98P52948 1817 aa33.33■■■□□ 2.93
PROM1-202ENST00000502501 EIF2S2P20042 333 aaKnown RBP33.33■■■□□ 2.93
PROM1-202ENST00000502501 DDX21Q9NR30 783 aaKnown RBP eCLIP33.33■■■□□ 2.93
PROM1-202ENST00000502501 MYL6BP14649 208 aa33.32■■■□□ 2.92
PROM1-202ENST00000502501 FAM9BQ8IZU0 186 aa33.32■■■□□ 2.92
PROM1-202ENST00000502501 CHMP4AQ9BY43 222 aa33.32■■■□□ 2.92
PROM1-202ENST00000502501 PDZRN3Q9UPQ7 1066 aa33.32■■■□□ 2.92
PROM1-202ENST00000502501 HDGFL1Q5TGJ6 251 aa33.31■■■□□ 2.92
PROM1-202ENST00000502501 DUSP27Q5VZP5 1158 aa33.31■■■□□ 2.92
PROM1-202ENST00000502501 BICDL1Q6ZP65 573 aa33.31■■■□□ 2.92
PROM1-202ENST00000502501 WDR63Q8IWG1 891 aa33.31■■■□□ 2.92
PROM1-202ENST00000502501 DPEP1P16444 411 aa33.3■■■□□ 2.92
PROM1-202ENST00000502501 KCNA3P22001 575 aa33.3■■■□□ 2.92
PROM1-202ENST00000502501 ANKRD31Q8N7Z5 1873 aa33.3■■■□□ 2.92
PROM1-202ENST00000502501 PRR5LQ6MZQ0 368 aa33.29■■■□□ 2.92
PROM1-202ENST00000502501 TTLL7Q6ZT98 887 aa33.29■■■□□ 2.92
PROM1-202ENST00000502501 DBF4Q9UBU7 674 aaPredicted RBP33.29■■■□□ 2.92
PROM1-202ENST00000502501 ARFGEF1Q9Y6D6 1849 aa33.29■■■□□ 2.92
PROM1-202ENST00000502501 IBTKQ9P2D0 1353 aaPredicted RBP33.29■■■□□ 2.92
PROM1-202ENST00000502501 A0A0G2JLW4 131 aa33.28■■■□□ 2.92
PROM1-202ENST00000502501 PROSER3Q2NL68 480 aa33.28■■■□□ 2.92
PROM1-202ENST00000502501 CNBD1Q8NA66 436 aa33.28■■■□□ 2.92
PROM1-202ENST00000502501 BRIP1Q9BX63 1249 aa33.28■■■□□ 2.92
PROM1-202ENST00000502501 HLFQ16534 295 aa33.27■■■□□ 2.92
PROM1-202ENST00000502501 PELP1Q8IZL8 1130 aaKnown RBP33.27■■■□□ 2.92
PROM1-202ENST00000502501 NIP7Q9Y221 180 aaKnown RBP eCLIP33.26■■■□□ 2.91
PROM1-202ENST00000502501 GIGYF2Q6Y7W6 1299 aaKnown RBP33.25■■■□□ 2.91
PROM1-202ENST00000502501 PIM2Q9P1W9 311 aa33.25■■■□□ 2.91
PROM1-202ENST00000502501 CHPF2Q9P2E5 772 aa33.25■■■□□ 2.91
PROM1-202ENST00000502501 ANKRD36CQ5JPF3 1778 aa33.24■■■□□ 2.91
PROM1-202ENST00000502501 PDE6BP35913 854 aa33.23■■■□□ 2.91
PROM1-202ENST00000502501 ST5P78524 1137 aa33.23■■■□□ 2.91
PROM1-202ENST00000502501 NBPF5PQ86XG9 351 aaPredicted RBP33.23■■■□□ 2.91
PROM1-202ENST00000502501 HYPKQ9NX55 129 aa33.23■■■□□ 2.91
PROM1-202ENST00000502501 RIC1Q4ADV7 1423 aa33.22■■■□□ 2.91
PROM1-202ENST00000502501 TPTE2Q6XPS3 522 aa33.21■■■□□ 2.91
PROM1-202ENST00000502501 C8orf58Q8NAV2 365 aa33.21■■■□□ 2.91
PROM1-202ENST00000502501 ZBTB3Q9H5J0 574 aa33.21■■■□□ 2.91
PROM1-202ENST00000502501 COL11A2P13942 1736 aaPredicted RBP33.21■■■□□ 2.91
PROM1-202ENST00000502501 YY1P25490 414 aa33.2■■■□□ 2.91
PROM1-202ENST00000502501 COPS6Q7L5N1 327 aa33.2■■■□□ 2.91
PROM1-202ENST00000502501 ZNF34Q8IZ26 560 aa33.2■■■□□ 2.91
PROM1-202ENST00000502501 ZNF521Q96K83 1311 aa33.2■■■□□ 2.91
PROM1-202ENST00000502501 ANXA1P04083 346 aa33.19■■■□□ 2.9
PROM1-202ENST00000502501 CHRNA5P30532 468 aa33.19■■■□□ 2.9
PROM1-202ENST00000502501 HSP90AB3PQ58FF7 597 aa33.19■■■□□ 2.9
PROM1-202ENST00000502501 XAGE3Q8WTP9 111 aa33.19■■■□□ 2.9
PROM1-202ENST00000502501 NECTIN2Q92692 538 aa33.19■■■□□ 2.9
PROM1-202ENST00000502501 TSR2Q969E8 191 aaKnown RBP33.19■■■□□ 2.9
PROM1-202ENST00000502501 NYXQ9GZU5 481 aa33.19■■■□□ 2.9
PROM1-202ENST00000502501 H0YIN7 160 aa33.18■■■□□ 2.9
PROM1-202ENST00000502501 DALRD3Q5D0E6 543 aaKnown RBP33.18■■■□□ 2.9
PROM1-202ENST00000502501 FANCIQ9NVI1 1328 aa33.18■■■□□ 2.9
PROM1-202ENST00000502501 KLRG2A4D1S0 409 aaPredicted RBP33.17■■■□□ 2.9
PROM1-202ENST00000502501 PARP10Q53GL7 1025 aa33.17■■■□□ 2.9
PROM1-202ENST00000502501 BCS1LQ9Y276 419 aa33.17■■■□□ 2.9
PROM1-202ENST00000502501 C2CD5Q86YS7 1000 aa33.16■■■□□ 2.9
PROM1-202ENST00000502501 RNF123Q5XPI4 1314 aa33.16■■■□□ 2.9
PROM1-202ENST00000502501 UBN2Q6ZU65 1347 aa33.16■■■□□ 2.9
PROM1-202ENST00000502501 NPHP1O15259 732 aa33.15■■■□□ 2.9
PROM1-202ENST00000502501 CCDC30Q5VVM6 783 aa33.15■■■□□ 2.9
PROM1-202ENST00000502501 DIEXFQ68CQ4 756 aaKnown RBP33.15■■■□□ 2.9
PROM1-202ENST00000502501 ARFGEF2Q9Y6D5 1785 aa33.15■■■□□ 2.9
PROM1-202ENST00000502501 PLBD2Q8NHP8 589 aa33.14■■■□□ 2.9
PROM1-202ENST00000502501 SENP3-EIF4A1A0A087X0R7 540 aa33.13■■■□□ 2.89
PROM1-202ENST00000502501 ELL2O00472 640 aaPredicted RBP33.12■■■□□ 2.89
PROM1-202ENST00000502501 TSPYL6Q8N831 410 aa33.12■■■□□ 2.89
PROM1-202ENST00000502501 MYH16Q9H6N6 1097 aa33.12■■■□□ 2.89
PROM1-202ENST00000502501 TWISTNBQ3B726 338 aaPredicted RBP33.11■■■□□ 2.89
PROM1-202ENST00000502501 ANKRD13DQ6ZTN6 518 aa33.11■■■□□ 2.89
PROM1-202ENST00000502501 TTLL6Q8N841 843 aa33.11■■■□□ 2.89
PROM1-202ENST00000502501 SRGNP10124 158 aa33.1■■■□□ 2.89
PROM1-202ENST00000502501 GOLGA2Q08379 1002 aa33.1■■■□□ 2.89
PROM1-202ENST00000502501 AIMP1Q12904 312 aaKnown RBP33.1■■■□□ 2.89
PROM1-202ENST00000502501 STYK1Q6J9G0 422 aa33.1■■■□□ 2.89
PROM1-202ENST00000502501 WWC3Q9ULE0 1092 aa33.1■■■□□ 2.89
PROM1-202ENST00000502501 SALL2Q9Y467 1007 aaPredicted RBP33.1■■■□□ 2.89
PROM1-202ENST00000502501 NTSR2O95665 410 aa33.09■■■□□ 2.89
PROM1-202ENST00000502501 TCIRG1Q13488 830 aa33.09■■■□□ 2.89
PROM1-202ENST00000502501 PPP1R42Q7Z4L9 355 aa33.09■■■□□ 2.89
PROM1-202ENST00000502501 TNRC6CQ9HCJ0 1690 aaKnown RBP33.09■■■□□ 2.89
PROM1-202ENST00000502501 CACNA1FO60840 1977 aa33.09■■■□□ 2.89
PROM1-202ENST00000502501 GPTP24298 496 aa33.08■■■□□ 2.89
PROM1-202ENST00000502501 SUSD4Q5VX71 490 aa33.07■■■□□ 2.88
PROM1-202ENST00000502501 CCDC24Q8N4L8 307 aa33.07■■■□□ 2.88
PROM1-202ENST00000502501 MASTLQ96GX5 879 aa33.07■■■□□ 2.88
PROM1-202ENST00000502501 ADCY9O60503 1353 aa33.07■■■□□ 2.88
PROM1-202ENST00000502501 ABCC12Q96J65 1359 aa33.07■■■□□ 2.88
PROM1-202ENST00000502501 GTF2E1P29083 439 aaPredicted RBP33.06■■■□□ 2.88
PROM1-202ENST00000502501 CRY2Q49AN0 593 aa33.06■■■□□ 2.88
PROM1-202ENST00000502501 CNKSR1Q969H4 720 aa33.06■■■□□ 2.88
PROM1-202ENST00000502501 SPINK5Q9NQ38 1064 aaPredicted RBP33.05■■■□□ 2.88
PROM1-202ENST00000502501 NPR1P16066 1061 aa33.04■■■□□ 2.88
PROM1-202ENST00000502501 TRIM28Q13263 835 aaKnown RBP33.04■■■□□ 2.88
PROM1-202ENST00000502501 NLRP10Q86W26 655 aa33.04■■■□□ 2.88
PROM1-202ENST00000502501 STK31Q9BXU1 1019 aa33.04■■■□□ 2.88
PROM1-202ENST00000502501 ISCA1Q9BUE6 129 aa33.03■■■□□ 2.88
PROM1-202ENST00000502501 UTP14AQ9BVJ6 771 aaKnown RBP33.03■■■□□ 2.88
PROM1-202ENST00000502501 ERFEQ4G0M1 354 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms