RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 FANCIQ9NVI1 1328 aa20.78■□□□□ 0.92
LMNA-217ENST00000498722 ANKRD36CQ5JPF3 1778 aa20.78■□□□□ 0.92
LMNA-217ENST00000498722 DCAF8L1A6NGE4 600 aa20.78■□□□□ 0.92
LMNA-217ENST00000498722 TBC1D9BQ66K14 1250 aa20.78■□□□□ 0.92
LMNA-217ENST00000498722 NLGN2Q8NFZ4 835 aa20.78■□□□□ 0.92
LMNA-217ENST00000498722 CHPF2Q9P2E5 772 aa20.78■□□□□ 0.92
LMNA-217ENST00000498722 NRXN2Q9P2S2 1712 aa20.78■□□□□ 0.92
LMNA-217ENST00000498722 CD2APQ9Y5K6 639 aa20.78■□□□□ 0.92
LMNA-217ENST00000498722 POLRMTO00411 1230 aaKnown RBP20.77■□□□□ 0.91
LMNA-217ENST00000498722 NPHP1O15259 732 aa20.77■□□□□ 0.91
LMNA-217ENST00000498722 TM4SF1P30408 202 aa20.77■□□□□ 0.91
LMNA-217ENST00000498722 AIMP1Q12904 312 aaKnown RBP20.77■□□□□ 0.91
LMNA-217ENST00000498722 TTLL7Q6ZT98 887 aa20.77■□□□□ 0.91
LMNA-217ENST00000498722 ZBTB3Q9H5J0 574 aa20.77■□□□□ 0.91
LMNA-217ENST00000498722 PDIA6Q15084 440 aa20.76■□□□□ 0.91
LMNA-217ENST00000498722 PELP1Q8IZL8 1130 aaKnown RBP20.76■□□□□ 0.91
LMNA-217ENST00000498722 SETDB2Q96T68 719 aa20.76■□□□□ 0.91
LMNA-217ENST00000498722 MYH16Q9H6N6 1097 aa20.76■□□□□ 0.91
LMNA-217ENST00000498722 DDX21Q9NR30 783 aaKnown RBP eCLIP20.76■□□□□ 0.91
LMNA-217ENST00000498722 DBF4Q9UBU7 674 aaPredicted RBP20.76■□□□□ 0.91
LMNA-217ENST00000498722 MAP3K15Q6ZN16 1313 aa20.75■□□□□ 0.91
LMNA-217ENST00000498722 SERPINB2P05120 415 aa20.75■□□□□ 0.91
LMNA-217ENST00000498722 TSPYL6Q8N831 410 aa20.75■□□□□ 0.91
LMNA-217ENST00000498722 CARMIL3Q8ND23 1372 aa20.75■□□□□ 0.91
LMNA-217ENST00000498722 C10orf71Q711Q0 1435 aa20.74■□□□□ 0.91
LMNA-217ENST00000498722 KIAA1551Q9HCM1 1747 aa20.74■□□□□ 0.91
LMNA-217ENST00000498722 HLFQ16534 295 aa20.74■□□□□ 0.91
LMNA-217ENST00000498722 TWISTNBQ3B726 338 aaPredicted RBP20.74■□□□□ 0.91
LMNA-217ENST00000498722 CLEC4GQ6UXB4 293 aa20.74■□□□□ 0.91
LMNA-217ENST00000498722 XAGE3Q8WTP9 111 aa20.74■□□□□ 0.91
LMNA-217ENST00000498722 CDCA7LQ96GN5 454 aa20.74■□□□□ 0.91
LMNA-217ENST00000498722 ARFGEF2Q9Y6D5 1785 aa20.74■□□□□ 0.91
LMNA-217ENST00000498722 ANKRD31Q8N7Z5 1873 aa20.73■□□□□ 0.91
LMNA-217ENST00000498722 E9PSI1 815 aa20.73■□□□□ 0.91
LMNA-217ENST00000498722 COPS6Q7L5N1 327 aa20.73■□□□□ 0.91
LMNA-217ENST00000498722 CHMP4AQ9BY43 222 aa20.73■□□□□ 0.91
LMNA-217ENST00000498722 SPINK5Q9NQ38 1064 aaPredicted RBP20.73■□□□□ 0.91
LMNA-217ENST00000498722 NIP7Q9Y221 180 aaKnown RBP eCLIP20.73■□□□□ 0.91
LMNA-217ENST00000498722 ERVV-1B6SEH8 477 aa20.72■□□□□ 0.91
LMNA-217ENST00000498722 SLFN5Q08AF3 891 aa20.72■□□□□ 0.91
LMNA-217ENST00000498722 CCDC30Q5VVM6 783 aa20.72■□□□□ 0.91
LMNA-217ENST00000498722 HYPKQ9NX55 129 aa20.72■□□□□ 0.91
LMNA-217ENST00000498722 WWC3Q9ULE0 1092 aa20.72■□□□□ 0.91
LMNA-217ENST00000498722 BRCA1P38398 1863 aaKnown RBP20.72■□□□□ 0.91
LMNA-217ENST00000498722 CACNA1SQ13698 1873 aa20.72■□□□□ 0.91
LMNA-217ENST00000498722 FAM177BA6PVY3 158 aa20.71■□□□□ 0.91
LMNA-217ENST00000498722 EXOSC9Q06265 439 aaKnown RBP20.71■□□□□ 0.91
LMNA-217ENST00000498722 ERICH6BQ5W0A0 696 aa20.71■□□□□ 0.91
LMNA-217ENST00000498722 LRP10Q7Z4F1 713 aa20.71■□□□□ 0.91
LMNA-217ENST00000498722 TCERG1O14776 1098 aaKnown RBP20.7■□□□□ 0.9
LMNA-217ENST00000498722 GPR162Q16538 588 aa20.7■□□□□ 0.9
LMNA-217ENST00000498722 NBPF5PQ86XG9 351 aaPredicted RBP20.7■□□□□ 0.9
LMNA-217ENST00000498722 STK31Q9BXU1 1019 aa20.7■□□□□ 0.9
LMNA-217ENST00000498722 RGL2O15211 777 aa20.69■□□□□ 0.9
LMNA-217ENST00000498722 GPTP24298 496 aa20.69■□□□□ 0.9
LMNA-217ENST00000498722 TRMT2AQ8IZ69 625 aaKnown RBP20.69■□□□□ 0.9
LMNA-217ENST00000498722 CNBD1Q8NA66 436 aa20.69■□□□□ 0.9
LMNA-217ENST00000498722 RCAN3Q9UKA8 241 aa20.69■□□□□ 0.9
LMNA-217ENST00000498722 CHD4Q14839 1912 aa20.69■□□□□ 0.9
LMNA-217ENST00000498722 DLEC1Q9Y238 1755 aa20.69■□□□□ 0.9
LMNA-217ENST00000498722 PXDNLA1KZ92 1463 aa20.69■□□□□ 0.9
LMNA-217ENST00000498722 RNF123Q5XPI4 1314 aa20.69■□□□□ 0.9
LMNA-217ENST00000498722 A0A0G2JLW4 131 aa20.68■□□□□ 0.9
LMNA-217ENST00000498722 CCDC24Q8N4L8 307 aa20.68■□□□□ 0.9
LMNA-217ENST00000498722 TGFB2P61812 414 aa20.67■□□□□ 0.9
LMNA-217ENST00000498722 ST5P78524 1137 aa20.67■□□□□ 0.9
LMNA-217ENST00000498722 GIGYF2Q6Y7W6 1299 aaKnown RBP20.67■□□□□ 0.9
LMNA-217ENST00000498722 ATP10DQ9P241 1426 aa20.66■□□□□ 0.9
LMNA-217ENST00000498722 GTF2E1P29083 439 aaPredicted RBP20.66■□□□□ 0.9
LMNA-217ENST00000498722 PRR5LQ6MZQ0 368 aa20.66■□□□□ 0.9
LMNA-217ENST00000498722 PHAXQ9H814 394 aaKnown RBP20.66■□□□□ 0.9
LMNA-217ENST00000498722 COL11A2P13942 1736 aaPredicted RBP20.65■□□□□ 0.9
LMNA-217ENST00000498722 DPEP1P16444 411 aa20.65■□□□□ 0.9
LMNA-217ENST00000498722 ANKRD13DQ6ZTN6 518 aa20.65■□□□□ 0.9
LMNA-217ENST00000498722 ARFGEF1Q9Y6D6 1849 aa20.65■□□□□ 0.9
LMNA-217ENST00000498722 TPTE2Q6XPS3 522 aa20.64■□□□□ 0.89
LMNA-217ENST00000498722 RIC3Q7Z5B4 369 aa20.64■□□□□ 0.89
LMNA-217ENST00000498722 PLBD2Q8NHP8 589 aa20.64■□□□□ 0.89
LMNA-217ENST00000498722 VAMP4O75379 141 aa20.63■□□□□ 0.89
LMNA-217ENST00000498722 CHRNA5P30532 468 aa20.63■□□□□ 0.89
LMNA-217ENST00000498722 HSP90AB3PQ58FF7 597 aa20.63■□□□□ 0.89
LMNA-217ENST00000498722 DDX58O95786 925 aaKnown RBP20.62■□□□□ 0.89
LMNA-217ENST00000498722 SLC4A2P04920 1241 aa20.62■□□□□ 0.89
LMNA-217ENST00000498722 NYXQ9GZU5 481 aa20.62■□□□□ 0.89
LMNA-217ENST00000498722 UBN2Q6ZU65 1347 aa20.62■□□□□ 0.89
LMNA-217ENST00000498722 GOLGB1Q14789 3259 aaKnown RBP20.62■□□□□ 0.89
LMNA-217ENST00000498722 PDE6BP35913 854 aa20.61■□□□□ 0.89
LMNA-217ENST00000498722 C2CD5Q86YS7 1000 aa20.61■□□□□ 0.89
LMNA-217ENST00000498722 ZNF34Q8IZ26 560 aa20.61■□□□□ 0.89
LMNA-217ENST00000498722 H0YIN7 160 aa20.6■□□□□ 0.89
LMNA-217ENST00000498722 YBX3P16989 372 aaKnown RBP eCLIP20.6■□□□□ 0.89
LMNA-217ENST00000498722 TCIRG1Q13488 830 aa20.6■□□□□ 0.89
LMNA-217ENST00000498722 PARP10Q53GL7 1025 aa20.6■□□□□ 0.89
LMNA-217ENST00000498722 PPP1R42Q7Z4L9 355 aa20.6■□□□□ 0.89
LMNA-217ENST00000498722 NUTM1Q86Y26 1132 aa20.6■□□□□ 0.89
LMNA-217ENST00000498722 ZNF428Q96B54 188 aa20.6■□□□□ 0.89
LMNA-217ENST00000498722 BRIP1Q9BX63 1249 aa20.6■□□□□ 0.89
LMNA-217ENST00000498722 BCS1LQ9Y276 419 aa20.6■□□□□ 0.89
LMNA-217ENST00000498722 TNRC6CQ9HCJ0 1690 aaKnown RBP20.6■□□□□ 0.89
LMNA-217ENST00000498722 RRP1P56182 461 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms