RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 DDX21Q9NR30 783 aaKnown RBP eCLIP16.59■□□□□ 0.25
HSPG2-213ENST00000498495 NIP7Q9Y221 180 aaKnown RBP eCLIP16.59■□□□□ 0.25
HSPG2-213ENST00000498495 MAP3K15Q6ZN16 1313 aa16.59■□□□□ 0.25
HSPG2-213ENST00000498495 CARMIL3Q8ND23 1372 aa16.59■□□□□ 0.25
HSPG2-213ENST00000498495 CCER2I3L3R5 266 aa16.58■□□□□ 0.24
HSPG2-213ENST00000498495 YY1P25490 414 aa16.58■□□□□ 0.24
HSPG2-213ENST00000498495 AIMP1Q12904 312 aaKnown RBP16.58■□□□□ 0.24
HSPG2-213ENST00000498495 PROSER3Q2NL68 480 aa16.58■□□□□ 0.24
HSPG2-213ENST00000498495 COPS6Q7L5N1 327 aa16.58■□□□□ 0.24
HSPG2-213ENST00000498495 WDR63Q8IWG1 891 aa16.58■□□□□ 0.24
HSPG2-213ENST00000498495 ZBTB3Q9H5J0 574 aa16.58■□□□□ 0.24
HSPG2-213ENST00000498495 PIM2Q9P1W9 311 aa16.58■□□□□ 0.24
HSPG2-213ENST00000498495 BCS1LQ9Y276 419 aa16.58■□□□□ 0.24
HSPG2-213ENST00000498495 PXDNLA1KZ92 1463 aa16.57■□□□□ 0.24
HSPG2-213ENST00000498495 IL16Q14005 1332 aa16.57■□□□□ 0.24
HSPG2-213ENST00000498495 KCNA3P22001 575 aa16.57■□□□□ 0.24
HSPG2-213ENST00000498495 CHRNA5P30532 468 aa16.57■□□□□ 0.24
HSPG2-213ENST00000498495 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
HSPG2-213ENST00000498495 PRR5LQ6MZQ0 368 aa16.57■□□□□ 0.24
HSPG2-213ENST00000498495 TPTE2Q6XPS3 522 aa16.57■□□□□ 0.24
HSPG2-213ENST00000498495 LRP10Q7Z4F1 713 aa16.57■□□□□ 0.24
HSPG2-213ENST00000498495 NBPF5PQ86XG9 351 aaPredicted RBP16.57■□□□□ 0.24
HSPG2-213ENST00000498495 CCDC24Q8N4L8 307 aa16.57■□□□□ 0.24
HSPG2-213ENST00000498495 CNBD1Q8NA66 436 aa16.57■□□□□ 0.24
HSPG2-213ENST00000498495 C8orf58Q8NAV2 365 aa16.57■□□□□ 0.24
HSPG2-213ENST00000498495 CHMP4AQ9BY43 222 aa16.57■□□□□ 0.24
HSPG2-213ENST00000498495 CHPF2Q9P2E5 772 aa16.57■□□□□ 0.24
HSPG2-213ENST00000498495 DBF4Q9UBU7 674 aaPredicted RBP16.57■□□□□ 0.24
HSPG2-213ENST00000498495 FAM177BA6PVY3 158 aa16.56■□□□□ 0.24
HSPG2-213ENST00000498495 H0YIN7 160 aa16.56■□□□□ 0.24
HSPG2-213ENST00000498495 PDE6BP35913 854 aa16.56■□□□□ 0.24
HSPG2-213ENST00000498495 ST5P78524 1137 aa16.56■□□□□ 0.24
HSPG2-213ENST00000498495 XAGE3Q8WTP9 111 aa16.56■□□□□ 0.24
HSPG2-213ENST00000498495 TSR2Q969E8 191 aaKnown RBP16.56■□□□□ 0.24
HSPG2-213ENST00000498495 BRIP1Q9BX63 1249 aa16.56■□□□□ 0.24
HSPG2-213ENST00000498495 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
HSPG2-213ENST00000498495 SCN7AQ01118 1682 aa16.56■□□□□ 0.24
HSPG2-213ENST00000498495 GTF2E1P29083 439 aaPredicted RBP16.55■□□□□ 0.24
HSPG2-213ENST00000498495 GIGYF2Q6Y7W6 1299 aaKnown RBP16.55■□□□□ 0.24
HSPG2-213ENST00000498495 C2CD5Q86YS7 1000 aa16.55■□□□□ 0.24
HSPG2-213ENST00000498495 PDZRN3Q9UPQ7 1066 aa16.55■□□□□ 0.24
HSPG2-213ENST00000498495 AFDNP55196 1824 aaKnown RBP16.54■□□□□ 0.24
HSPG2-213ENST00000498495 DALRD3Q5D0E6 543 aaKnown RBP16.54■□□□□ 0.24
HSPG2-213ENST00000498495 HYPKQ9NX55 129 aa16.54■□□□□ 0.24
HSPG2-213ENST00000498495 N4BP2Q86UW6 1770 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-213ENST00000498495 GPTP24298 496 aa16.53■□□□□ 0.24
HSPG2-213ENST00000498495 CCDC30Q5VVM6 783 aa16.53■□□□□ 0.24
HSPG2-213ENST00000498495 TSPYL6Q8N831 410 aa16.53■□□□□ 0.24
HSPG2-213ENST00000498495 BCORQ6W2J9 1755 aa16.53■□□□□ 0.24
HSPG2-213ENST00000498495 GOLGA2Q08379 1002 aa16.52■□□□□ 0.24
HSPG2-213ENST00000498495 HSP90AB3PQ58FF7 597 aa16.52■□□□□ 0.24
HSPG2-213ENST00000498495 ANKRD13DQ6ZTN6 518 aa16.52■□□□□ 0.24
HSPG2-213ENST00000498495 ZNF34Q8IZ26 560 aa16.52■□□□□ 0.24
HSPG2-213ENST00000498495 NYXQ9GZU5 481 aa16.52■□□□□ 0.24
HSPG2-213ENST00000498495 NRXN2Q9P2S2 1712 aa16.52■□□□□ 0.24
HSPG2-213ENST00000498495 TWISTNBQ3B726 338 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-213ENST00000498495 ARHGAP27Q6ZUM4 889 aa16.51■□□□□ 0.23
HSPG2-213ENST00000498495 TTLL6Q8N841 843 aa16.51■□□□□ 0.23
HSPG2-213ENST00000498495 ZNF622Q969S3 477 aaKnown RBP eCLIP16.51■□□□□ 0.23
HSPG2-213ENST00000498495 TCIRG1Q13488 830 aa16.5■□□□□ 0.23
HSPG2-213ENST00000498495 PARP10Q53GL7 1025 aa16.5■□□□□ 0.23
HSPG2-213ENST00000498495 SUSD4Q5VX71 490 aa16.5■□□□□ 0.23
HSPG2-213ENST00000498495 PPP1R42Q7Z4L9 355 aa16.5■□□□□ 0.23
HSPG2-213ENST00000498495 MIER1Q8N108 512 aa16.5■□□□□ 0.23
HSPG2-213ENST00000498495 PLBD2Q8NHP8 589 aa16.5■□□□□ 0.23
HSPG2-213ENST00000498495 MYH16Q9H6N6 1097 aa16.5■□□□□ 0.23
HSPG2-213ENST00000498495 FANCIQ9NVI1 1328 aa16.49■□□□□ 0.23
HSPG2-213ENST00000498495 NUTM1Q86Y26 1132 aa16.49■□□□□ 0.23
HSPG2-213ENST00000498495 PHAXQ9H814 394 aaKnown RBP16.49■□□□□ 0.23
HSPG2-213ENST00000498495 KIAA1551Q9HCM1 1747 aa16.49■□□□□ 0.23
HSPG2-213ENST00000498495 ATP10DQ9P241 1426 aa16.49■□□□□ 0.23
HSPG2-213ENST00000498495 NUP98P52948 1817 aa16.49■□□□□ 0.23
HSPG2-213ENST00000498495 UBN2Q6ZU65 1347 aa16.48■□□□□ 0.23
HSPG2-213ENST00000498495 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
HSPG2-213ENST00000498495 RIC3Q7Z5B4 369 aa16.48■□□□□ 0.23
HSPG2-213ENST00000498495 STK31Q9BXU1 1019 aa16.48■□□□□ 0.23
HSPG2-213ENST00000498495 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
HSPG2-213ENST00000498495 TCERG1O14776 1098 aaKnown RBP16.47■□□□□ 0.23
HSPG2-213ENST00000498495 SRGNP10124 158 aa16.47■□□□□ 0.23
HSPG2-213ENST00000498495 ERFEQ4G0M1 354 aa16.47■□□□□ 0.23
HSPG2-213ENST00000498495 CNKSR1Q969H4 720 aa16.47■□□□□ 0.23
HSPG2-213ENST00000498495 MASTLQ96GX5 879 aa16.47■□□□□ 0.23
HSPG2-213ENST00000498495 UTP14AQ9BVJ6 771 aaKnown RBP16.47■□□□□ 0.23
HSPG2-213ENST00000498495 CHD4Q14839 1912 aa16.47■□□□□ 0.23
HSPG2-213ENST00000498495 VAMP4O75379 141 aa16.46■□□□□ 0.23
HSPG2-213ENST00000498495 STYK1Q6J9G0 422 aa16.46■□□□□ 0.23
HSPG2-213ENST00000498495 KLRG2A4D1S0 409 aaPredicted RBP16.45■□□□□ 0.22
HSPG2-213ENST00000498495 NTSR2O95665 410 aa16.45■□□□□ 0.22
HSPG2-213ENST00000498495 DDX58O95786 925 aaKnown RBP16.45■□□□□ 0.22
HSPG2-213ENST00000498495 SLC4A2P04920 1241 aa16.45■□□□□ 0.22
HSPG2-213ENST00000498495 NPR1P16066 1061 aa16.45■□□□□ 0.22
HSPG2-213ENST00000498495 NLRP10Q86W26 655 aa16.45■□□□□ 0.22
HSPG2-213ENST00000498495 ZNF521Q96K83 1311 aa16.45■□□□□ 0.22
HSPG2-213ENST00000498495 IBTKQ9P2D0 1353 aaPredicted RBP16.44■□□□□ 0.22
HSPG2-213ENST00000498495 ATP5J2-PTCD1G3V325 749 aa16.44■□□□□ 0.22
HSPG2-213ENST00000498495 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
HSPG2-213ENST00000498495 ALDH1B1P30837 517 aa16.43■□□□□ 0.22
HSPG2-213ENST00000498495 SLC10A5Q5PT55 438 aa16.43■□□□□ 0.22
HSPG2-213ENST00000498495 NLRP3Q96P20 1036 aa16.43■□□□□ 0.22
HSPG2-213ENST00000498495 ISCA1Q9BUE6 129 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms