RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 CCDC27Q2M243 656 aa21.69■■□□□ 1.06
ABCF3-218ENST00000498136 TTLL7Q6ZT98 887 aa21.69■■□□□ 1.06
ABCF3-218ENST00000498136 WWC1Q8IX03 1113 aa21.69■■□□□ 1.06
ABCF3-218ENST00000498136 NUP98P52948 1817 aa21.69■■□□□ 1.06
ABCF3-218ENST00000498136 ANXA1P04083 346 aa21.68■■□□□ 1.06
ABCF3-218ENST00000498136 HLFQ16534 295 aa21.68■■□□□ 1.06
ABCF3-218ENST00000498136 HDGFL1Q5TGJ6 251 aa21.68■■□□□ 1.06
ABCF3-218ENST00000498136 DUSP27Q5VZP5 1158 aa21.68■■□□□ 1.06
ABCF3-218ENST00000498136 ZBTB3Q9H5J0 574 aa21.68■■□□□ 1.06
ABCF3-218ENST00000498136 NIP7Q9Y221 180 aaKnown RBP eCLIP21.68■■□□□ 1.06
ABCF3-218ENST00000498136 BCS1LQ9Y276 419 aa21.68■■□□□ 1.06
ABCF3-218ENST00000498136 MAP3K15Q6ZN16 1313 aa21.67■■□□□ 1.06
ABCF3-218ENST00000498136 HOXB7P09629 217 aa21.67■■□□□ 1.06
ABCF3-218ENST00000498136 CHRNA5P30532 468 aa21.67■■□□□ 1.06
ABCF3-218ENST00000498136 CNBD1Q8NA66 436 aa21.67■■□□□ 1.06
ABCF3-218ENST00000498136 BRCA1P38398 1863 aaKnown RBP21.66■■□□□ 1.06
ABCF3-218ENST00000498136 ELL2O00472 640 aaPredicted RBP21.66■■□□□ 1.06
ABCF3-218ENST00000498136 PDIA6Q15084 440 aa21.66■■□□□ 1.06
ABCF3-218ENST00000498136 PROSER3Q2NL68 480 aa21.66■■□□□ 1.06
ABCF3-218ENST00000498136 NBPF5PQ86XG9 351 aaPredicted RBP21.66■■□□□ 1.06
ABCF3-218ENST00000498136 CCDC24Q8N4L8 307 aa21.66■■□□□ 1.06
ABCF3-218ENST00000498136 FAM177BA6PVY3 158 aa21.65■■□□□ 1.06
ABCF3-218ENST00000498136 ERVV-1B6SEH8 477 aa21.65■■□□□ 1.06
ABCF3-218ENST00000498136 RGL2O15211 777 aa21.65■■□□□ 1.06
ABCF3-218ENST00000498136 ST5P78524 1137 aa21.65■■□□□ 1.06
ABCF3-218ENST00000498136 AIMP1Q12904 312 aaKnown RBP21.65■■□□□ 1.06
ABCF3-218ENST00000498136 PRR5LQ6MZQ0 368 aa21.65■■□□□ 1.06
ABCF3-218ENST00000498136 PIM2Q9P1W9 311 aa21.65■■□□□ 1.06
ABCF3-218ENST00000498136 CHPF2Q9P2E5 772 aa21.65■■□□□ 1.06
ABCF3-218ENST00000498136 NCBP3Q53F19 620 aaKnown RBP21.64■■□□□ 1.05
ABCF3-218ENST00000498136 TSR2Q969E8 191 aaKnown RBP21.64■■□□□ 1.05
ABCF3-218ENST00000498136 DDX21Q9NR30 783 aaKnown RBP eCLIP21.64■■□□□ 1.05
ABCF3-218ENST00000498136 ANKRD31Q8N7Z5 1873 aa21.63■■□□□ 1.05
ABCF3-218ENST00000498136 KCNA3P22001 575 aa21.63■■□□□ 1.05
ABCF3-218ENST00000498136 H0YIN7 160 aa21.62■■□□□ 1.05
ABCF3-218ENST00000498136 PDE6BP35913 854 aa21.62■■□□□ 1.05
ABCF3-218ENST00000498136 COPS6Q7L5N1 327 aa21.62■■□□□ 1.05
ABCF3-218ENST00000498136 LRP10Q7Z4F1 713 aa21.62■■□□□ 1.05
ABCF3-218ENST00000498136 C2CD5Q86YS7 1000 aa21.62■■□□□ 1.05
ABCF3-218ENST00000498136 XAGE3Q8WTP9 111 aa21.62■■□□□ 1.05
ABCF3-218ENST00000498136 DBF4Q9UBU7 674 aaPredicted RBP21.62■■□□□ 1.05
ABCF3-218ENST00000498136 IL16Q14005 1332 aa21.61■■□□□ 1.05
ABCF3-218ENST00000498136 GPTP24298 496 aa21.61■■□□□ 1.05
ABCF3-218ENST00000498136 GTF2E1P29083 439 aaPredicted RBP21.61■■□□□ 1.05
ABCF3-218ENST00000498136 DALRD3Q5D0E6 543 aaKnown RBP21.61■■□□□ 1.05
ABCF3-218ENST00000498136 TPTE2Q6XPS3 522 aa21.61■■□□□ 1.05
ABCF3-218ENST00000498136 C8orf58Q8NAV2 365 aa21.61■■□□□ 1.05
ABCF3-218ENST00000498136 BRIP1Q9BX63 1249 aa21.61■■□□□ 1.05
ABCF3-218ENST00000498136 DLEC1Q9Y238 1755 aa21.61■■□□□ 1.05
ABCF3-218ENST00000498136 ARFGEF1Q9Y6D6 1849 aa21.6■■□□□ 1.05
ABCF3-218ENST00000498136 GIGYF2Q6Y7W6 1299 aaKnown RBP21.6■■□□□ 1.05
ABCF3-218ENST00000498136 DIEXFQ68CQ4 756 aaKnown RBP21.59■■□□□ 1.05
ABCF3-218ENST00000498136 WDR63Q8IWG1 891 aa21.59■■□□□ 1.05
ABCF3-218ENST00000498136 ATP10DQ9P241 1426 aa21.59■■□□□ 1.05
ABCF3-218ENST00000498136 CCER2I3L3R5 266 aa21.58■■□□□ 1.05
ABCF3-218ENST00000498136 ZNF622Q969S3 477 aaKnown RBP eCLIP21.58■■□□□ 1.05
ABCF3-218ENST00000498136 NYXQ9GZU5 481 aa21.58■■□□□ 1.05
ABCF3-218ENST00000498136 HYPKQ9NX55 129 aa21.58■■□□□ 1.05
ABCF3-218ENST00000498136 ANKRD36CQ5JPF3 1778 aa21.57■■□□□ 1.04
ABCF3-218ENST00000498136 ARHGAP27Q6ZUM4 889 aa21.57■■□□□ 1.04
ABCF3-218ENST00000498136 CHMP4AQ9BY43 222 aa21.57■■□□□ 1.04
ABCF3-218ENST00000498136 PDZRN3Q9UPQ7 1066 aa21.57■■□□□ 1.04
ABCF3-218ENST00000498136 COL11A2P13942 1736 aaPredicted RBP21.57■■□□□ 1.04
ABCF3-218ENST00000498136 CCDC30Q5VVM6 783 aa21.56■■□□□ 1.04
ABCF3-218ENST00000498136 TSPYL6Q8N831 410 aa21.56■■□□□ 1.04
ABCF3-218ENST00000498136 TTLL6Q8N841 843 aa21.56■■□□□ 1.04
ABCF3-218ENST00000498136 CACNA1SQ13698 1873 aa21.56■■□□□ 1.04
ABCF3-218ENST00000498136 UBN2Q6ZU65 1347 aa21.55■■□□□ 1.04
ABCF3-218ENST00000498136 HSP90AB3PQ58FF7 597 aa21.55■■□□□ 1.04
ABCF3-218ENST00000498136 ZNF34Q8IZ26 560 aa21.55■■□□□ 1.04
ABCF3-218ENST00000498136 FANCIQ9NVI1 1328 aa21.55■■□□□ 1.04
ABCF3-218ENST00000498136 TWISTNBQ3B726 338 aaPredicted RBP21.54■■□□□ 1.04
ABCF3-218ENST00000498136 PPP1R42Q7Z4L9 355 aa21.54■■□□□ 1.04
ABCF3-218ENST00000498136 NUTM1Q86Y26 1132 aa21.54■■□□□ 1.04
ABCF3-218ENST00000498136 PARP10Q53GL7 1025 aa21.53■■□□□ 1.04
ABCF3-218ENST00000498136 SUSD4Q5VX71 490 aa21.53■■□□□ 1.04
ABCF3-218ENST00000498136 ANKRD13DQ6ZTN6 518 aa21.53■■□□□ 1.04
ABCF3-218ENST00000498136 PLBD2Q8NHP8 589 aa21.53■■□□□ 1.04
ABCF3-218ENST00000498136 GOLGA2Q08379 1002 aa21.52■■□□□ 1.04
ABCF3-218ENST00000498136 ERFEQ4G0M1 354 aa21.52■■□□□ 1.04
ABCF3-218ENST00000498136 STK31Q9BXU1 1019 aa21.52■■□□□ 1.04
ABCF3-218ENST00000498136 MYH16Q9H6N6 1097 aa21.52■■□□□ 1.04
ABCF3-218ENST00000498136 PHAXQ9H814 394 aaKnown RBP21.52■■□□□ 1.04
ABCF3-218ENST00000498136 ARFGEF2Q9Y6D5 1785 aa21.51■■□□□ 1.03
ABCF3-218ENST00000498136 TCERG1O14776 1098 aaKnown RBP21.51■■□□□ 1.03
ABCF3-218ENST00000498136 MASTLQ96GX5 879 aa21.51■■□□□ 1.03
ABCF3-218ENST00000498136 ZNF219Q9P2Y4 722 aaPredicted RBP21.51■■□□□ 1.03
ABCF3-218ENST00000498136 IBTKQ9P2D0 1353 aaPredicted RBP21.5■■□□□ 1.03
ABCF3-218ENST00000498136 SRGNP10124 158 aa21.5■■□□□ 1.03
ABCF3-218ENST00000498136 TCIRG1Q13488 830 aa21.5■■□□□ 1.03
ABCF3-218ENST00000498136 RIC3Q7Z5B4 369 aa21.5■■□□□ 1.03
ABCF3-218ENST00000498136 CNKSR1Q969H4 720 aa21.5■■□□□ 1.03
ABCF3-218ENST00000498136 UTP14AQ9BVJ6 771 aaKnown RBP21.5■■□□□ 1.03
ABCF3-218ENST00000498136 TNRC6CQ9HCJ0 1690 aaKnown RBP21.5■■□□□ 1.03
ABCF3-218ENST00000498136 ABCC12Q96J65 1359 aa21.49■■□□□ 1.03
ABCF3-218ENST00000498136 NTSR2O95665 410 aa21.49■■□□□ 1.03
ABCF3-218ENST00000498136 EXOSC9Q06265 439 aaKnown RBP21.49■■□□□ 1.03
ABCF3-218ENST00000498136 STYK1Q6J9G0 422 aa21.49■■□□□ 1.03
ABCF3-218ENST00000498136 ZNF784Q8NCA9 323 aaPredicted RBP21.49■■□□□ 1.03
ABCF3-218ENST00000498136 SPINK5Q9NQ38 1064 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms