RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 E2F5Q15329 346 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 SWT1Q5T5J6 900 aaKnown RBP1.88□□□□□ -2.11
XRN1-214ENST00000498077 KYAT3Q6YP21 454 aaKnown RBP1.88□□□□□ -2.11
XRN1-214ENST00000498077 TANGO6Q9C0B7 1094 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 PDZRN3Q9UPQ7 1066 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 NR2E3Q9Y5X4 410 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 DIP2CQ9Y2E4 1556 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 CACNA1IQ9P0X4 2223 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 ZNF839A8K0R7 811 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 TNFRSF10AO00220 468 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 CASTP20810 708 aaKnown RBP1.88□□□□□ -2.11
XRN1-214ENST00000498077 KIZQ2M2Z5 673 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 RBBP8NLQ8NC74 664 aaPredicted RBP1.88□□□□□ -2.11
XRN1-214ENST00000498077 ZNF277Q9NRM2 450 aaPredicted RBP1.88□□□□□ -2.11
XRN1-214ENST00000498077 PCDHGA10Q9Y5H3 936 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 PCDHA11Q9Y5I1 949 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 MYOM1P52179 1685 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 CIB4A0PJX0 185 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 AXIN1O15169 862 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 PRPF6O94906 941 aaKnown RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 HSPA8P11142 646 aaKnown RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 DRG2P55039 364 aaKnown RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 NUCB2P80303 420 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 RAB35Q15286 201 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 SAMD7Q7Z3H4 446 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 HDGFL2Q7Z4V5 671 aaPredicted RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 KCNG4Q8TDN1 519 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 BMFQ96LC9 184 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 KRTAP3-3Q9BYR6 98 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 KRTAP3-2Q9BYR7 98 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 SPTLC1O15269 473 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 NAA40Q86UY6 237 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 FBXL6Q8N531 539 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 SNIP1Q8TAD8 396 aaKnown RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 AFG1LQ8WV93 481 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 BCAS3Q9H6U6 928 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 PGPEP1Q9NXJ5 209 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 TNRC6CQ9HCJ0 1690 aaKnown RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 NUP188Q5SRE5 1749 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 DISP1Q96F81 1524 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 LOC102723971A0A1B0GUV8 181 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 BHMG1C9JSJ3 638 aaPredicted RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 MPIP34949 423 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 BCAMP50895 628 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 TMEM92Q6UXU6 159 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 DHX32Q7L7V1 743 aaKnown RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 ZNF598Q86UK7 904 aaKnown RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 YIPF4Q9BSR8 244 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 ENAMQ9NRM1 1142 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 LRP2BPQ9P2M1 347 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 DBR1Q9UK59 544 aaKnown RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 PNMA8BQ9ULN7 279 aaPredicted RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 PCDHA9Q9Y5H5 950 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 PADI6Q6TGC4 694 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 RPAINQ86UA6 219 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 LURAP1LQ8IV03 231 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 GAS2L2Q8NHY3 880 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 ZNF526Q8TF50 670 aaPredicted RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 PRKD2Q9BZL6 878 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 PLSCR4Q9NRQ2 329 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 USP40Q9NVE5 1235 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 THSD7BQ9C0I4 1608 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 ABCA10Q8WWZ4 1543 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 H3BQ06 376 aaPredicted RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 GNPATO15228 680 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 COL9A2Q14055 689 aaPredicted RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 GPKOWQ92917 476 aaPredicted RBP eCLIP1.87□□□□□ -2.11
XRN1-214ENST00000498077 STK17AQ9UEE5 414 aa1.87□□□□□ -2.11
XRN1-214ENST00000498077 SALL2Q9Y467 1007 aaPredicted RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 MAGED1Q9Y5V3 778 aaPredicted RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 TPRP12270 2363 aaKnown RBP1.87□□□□□ -2.11
XRN1-214ENST00000498077 ABRQ12979 859 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 TTLL12Q14166 644 aaPredicted RBP1.86□□□□□ -2.11
XRN1-214ENST00000498077 LARP1BQ659C4 914 aaKnown RBP1.86□□□□□ -2.11
XRN1-214ENST00000498077 TRAF7Q6Q0C0 670 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 ZC3H18Q86VM9 953 aaKnown RBP1.86□□□□□ -2.11
XRN1-214ENST00000498077 USP33Q8TEY7 942 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 SPSB2Q99619 263 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 TNS1Q9HBL0 1735 aaKnown RBP1.86□□□□□ -2.11
XRN1-214ENST00000498077 ARPC4-TTLL3A0A0A6YYG9 625 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 ZPR1O75312 459 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 POLR3DP05423 398 aaPredicted RBP1.86□□□□□ -2.11
XRN1-214ENST00000498077 DHX9Q08211 1270 aaKnown RBP1.86□□□□□ -2.11
XRN1-214ENST00000498077 ST3GAL1Q11201 340 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 ZNF618Q5T7W0 954 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 ANKLE2Q86XL3 938 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 ZDHHC12Q96GR4 267 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 POLR3EQ9NVU0 708 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 FYCO1Q9BQS8 1478 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 PKD1L2Q7Z442 2459 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 LSP1P33241 339 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 PHF6Q8IWS0 365 aaKnown RBP eCLIP1.86□□□□□ -2.11
XRN1-214ENST00000498077 MDFIQ99750 246 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 MAK16Q9BXY0 300 aaKnown RBP1.86□□□□□ -2.11
XRN1-214ENST00000498077 ZC3H12CQ9C0D7 883 aaKnown RBP1.86□□□□□ -2.11
XRN1-214ENST00000498077 TIAM1Q13009 1591 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 FAM187AA6NFU0 413 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 MAGEB2O15479 319 aa1.86□□□□□ -2.11
XRN1-214ENST00000498077 HMGB2P26583 209 aaKnown RBP1.86□□□□□ -2.11
XRN1-214ENST00000498077 MARSP56192 900 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms