RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PDZRN3Q9UPQ7 1066 aa20.01■□□□□ 0.79
NUP50-219ENST00000497960 EIF2S2P20042 333 aaKnown RBP20■□□□□ 0.79
NUP50-219ENST00000497960 PDE6BP35913 854 aa20■□□□□ 0.79
NUP50-219ENST00000497960 KIF6Q6ZMV9 814 aa20■□□□□ 0.79
NUP50-219ENST00000497960 NBPF5PQ86XG9 351 aaPredicted RBP20■□□□□ 0.79
NUP50-219ENST00000497960 NIP7Q9Y221 180 aaKnown RBP eCLIP20■□□□□ 0.79
NUP50-219ENST00000497960 CCDC24Q8N4L8 307 aa19.99■□□□□ 0.79
NUP50-219ENST00000497960 BRCA1P38398 1863 aaKnown RBP19.99■□□□□ 0.79
NUP50-219ENST00000497960 BCORQ6W2J9 1755 aa19.98■□□□□ 0.79
NUP50-219ENST00000497960 ERVV-1B6SEH8 477 aa19.98■□□□□ 0.79
NUP50-219ENST00000497960 CCDC184Q52MB2 194 aa19.98■□□□□ 0.79
NUP50-219ENST00000497960 TTLL6Q8N841 843 aa19.98■□□□□ 0.79
NUP50-219ENST00000497960 MAP3K15Q6ZN16 1313 aa19.98■□□□□ 0.79
NUP50-219ENST00000497960 ATP10DQ9P241 1426 aa19.97■□□□□ 0.79
NUP50-219ENST00000497960 CALD1Q05682 793 aaKnown RBP19.97■□□□□ 0.79
NUP50-219ENST00000497960 HLFQ16534 295 aa19.97■□□□□ 0.79
NUP50-219ENST00000497960 TPTE2Q6XPS3 522 aa19.97■□□□□ 0.79
NUP50-219ENST00000497960 CFAP44Q96MT7 982 aa19.97■□□□□ 0.79
NUP50-219ENST00000497960 TTLL7Q6ZT98 887 aa19.96■□□□□ 0.79
NUP50-219ENST00000497960 ZNF622Q969S3 477 aaKnown RBP eCLIP19.96■□□□□ 0.79
NUP50-219ENST00000497960 ARFGEF1Q9Y6D6 1849 aa19.95■□□□□ 0.78
NUP50-219ENST00000497960 ADCY9O60503 1353 aa19.95■□□□□ 0.78
NUP50-219ENST00000497960 FAM177BA6PVY3 158 aa19.94■□□□□ 0.78
NUP50-219ENST00000497960 GTF2E1P29083 439 aaPredicted RBP19.94■□□□□ 0.78
NUP50-219ENST00000497960 NECTIN2Q92692 538 aa19.94■□□□□ 0.78
NUP50-219ENST00000497960 ZBTB3Q9H5J0 574 aa19.94■□□□□ 0.78
NUP50-219ENST00000497960 GPBP1L1Q9HC44 474 aaPredicted RBP19.94■□□□□ 0.78
NUP50-219ENST00000497960 PDIA6Q15084 440 aa19.93■□□□□ 0.78
NUP50-219ENST00000497960 KRT24Q2M2I5 525 aa19.93■□□□□ 0.78
NUP50-219ENST00000497960 IFT57Q9NWB7 429 aa19.93■□□□□ 0.78
NUP50-219ENST00000497960 HOXB7P09629 217 aa19.92■□□□□ 0.78
NUP50-219ENST00000497960 GNAI1P63096 354 aa19.92■□□□□ 0.78
NUP50-219ENST00000497960 C9orf131Q5VYM1 1079 aa19.92■□□□□ 0.78
NUP50-219ENST00000497960 MIER1Q8N108 512 aa19.92■□□□□ 0.78
NUP50-219ENST00000497960 ZNF526Q8TF50 670 aaPredicted RBP19.92■□□□□ 0.78
NUP50-219ENST00000497960 CNKSR1Q969H4 720 aa19.92■□□□□ 0.78
NUP50-219ENST00000497960 NYXQ9GZU5 481 aa19.92■□□□□ 0.78
NUP50-219ENST00000497960 MBIPQ9NS73 344 aa19.92■□□□□ 0.78
NUP50-219ENST00000497960 ANXA1P04083 346 aa19.91■□□□□ 0.78
NUP50-219ENST00000497960 PROSER3Q2NL68 480 aa19.91■□□□□ 0.78
NUP50-219ENST00000497960 STYK1Q6J9G0 422 aa19.91■□□□□ 0.78
NUP50-219ENST00000497960 GIGYF2Q6Y7W6 1299 aaKnown RBP19.91■□□□□ 0.78
NUP50-219ENST00000497960 MASTLQ96GX5 879 aa19.91■□□□□ 0.78
NUP50-219ENST00000497960 DDX21Q9NR30 783 aaKnown RBP eCLIP19.91■□□□□ 0.78
NUP50-219ENST00000497960 ANKRD31Q8N7Z5 1873 aa19.9■□□□□ 0.78
NUP50-219ENST00000497960 CCER2I3L3R5 266 aa19.9■□□□□ 0.78
NUP50-219ENST00000497960 ZNF853P0CG23 659 aa19.9■□□□□ 0.78
NUP50-219ENST00000497960 SRGNP10124 158 aa19.9■□□□□ 0.78
NUP50-219ENST00000497960 GPTP24298 496 aa19.9■□□□□ 0.78
NUP50-219ENST00000497960 HDGFL1Q5TGJ6 251 aa19.9■□□□□ 0.78
NUP50-219ENST00000497960 LRP10Q7Z4F1 713 aa19.9■□□□□ 0.78
NUP50-219ENST00000497960 DLEC1Q9Y238 1755 aa19.9■□□□□ 0.78
NUP50-219ENST00000497960 AIMP1Q12904 312 aaKnown RBP19.89■□□□□ 0.77
NUP50-219ENST00000497960 DUSP27Q5VZP5 1158 aa19.89■□□□□ 0.77
NUP50-219ENST00000497960 COPS6Q7L5N1 327 aa19.89■□□□□ 0.77
NUP50-219ENST00000497960 RNF181Q9P0P0 153 aa19.89■□□□□ 0.77
NUP50-219ENST00000497960 XAGE3Q8WTP9 111 aa19.88■□□□□ 0.77
NUP50-219ENST00000497960 CHPF2Q9P2E5 772 aa19.88■□□□□ 0.77
NUP50-219ENST00000497960 C21orf2O43822 256 aa19.87■□□□□ 0.77
NUP50-219ENST00000497960 NPR1P16066 1061 aa19.87■□□□□ 0.77
NUP50-219ENST00000497960 PARP10Q53GL7 1025 aa19.87■□□□□ 0.77
NUP50-219ENST00000497960 ZNF34Q8IZ26 560 aa19.87■□□□□ 0.77
NUP50-219ENST00000497960 ZNF219Q9P2Y4 722 aaPredicted RBP19.87■□□□□ 0.77
NUP50-219ENST00000497960 DBF4Q9UBU7 674 aaPredicted RBP19.87■□□□□ 0.77
NUP50-219ENST00000497960 NUP98P52948 1817 aa19.87■□□□□ 0.77
NUP50-219ENST00000497960 KLRG2A4D1S0 409 aaPredicted RBP19.86■□□□□ 0.77
NUP50-219ENST00000497960 C1QTNF8P60827 252 aa19.86■□□□□ 0.77
NUP50-219ENST00000497960 RASSF7Q02833 373 aa19.86■□□□□ 0.77
NUP50-219ENST00000497960 CCDC27Q2M243 656 aa19.86■□□□□ 0.77
NUP50-219ENST00000497960 HSP90AB3PQ58FF7 597 aa19.86■□□□□ 0.77
NUP50-219ENST00000497960 SUSD4Q5VX71 490 aa19.86■□□□□ 0.77
NUP50-219ENST00000497960 PRPF40BQ6NWY9 871 aaKnown RBP19.86■□□□□ 0.77
NUP50-219ENST00000497960 PPP1R42Q7Z4L9 355 aa19.86■□□□□ 0.77
NUP50-219ENST00000497960 NUTM1Q86Y26 1132 aa19.86■□□□□ 0.77
NUP50-219ENST00000497960 IBTKQ9P2D0 1353 aaPredicted RBP19.85■□□□□ 0.77
NUP50-219ENST00000497960 UBN2Q6ZU65 1347 aa19.85■□□□□ 0.77
NUP50-219ENST00000497960 LMNB1P20700 586 aa19.85■□□□□ 0.77
NUP50-219ENST00000497960 SOGA3Q5TF21 947 aa19.85■□□□□ 0.77
NUP50-219ENST00000497960 ERFEQ4G0M1 354 aa19.84■□□□□ 0.77
NUP50-219ENST00000497960 FAM9BQ8IZU0 186 aa19.84■□□□□ 0.77
NUP50-219ENST00000497960 CHMP4AQ9BY43 222 aa19.84■□□□□ 0.77
NUP50-219ENST00000497960 HYPKQ9NX55 129 aa19.84■□□□□ 0.77
NUP50-219ENST00000497960 COL11A2P13942 1736 aaPredicted RBP19.84■□□□□ 0.77
NUP50-219ENST00000497960 SENP3-EIF4A1A0A087X0R7 540 aa19.83■□□□□ 0.77
NUP50-219ENST00000497960 ELL2O00472 640 aaPredicted RBP19.83■□□□□ 0.77
NUP50-219ENST00000497960 NCBP3Q53F19 620 aaKnown RBP19.83■□□□□ 0.77
NUP50-219ENST00000497960 WWC1Q8IX03 1113 aa19.83■□□□□ 0.77
NUP50-219ENST00000497960 UTP14AQ9BVJ6 771 aaKnown RBP19.83■□□□□ 0.77
NUP50-219ENST00000497960 ABCC12Q96J65 1359 aa19.83■□□□□ 0.76
NUP50-219ENST00000497960 NFKBIEO00221 500 aa19.82■□□□□ 0.76
NUP50-219ENST00000497960 NTSR2O95665 410 aa19.82■□□□□ 0.76
NUP50-219ENST00000497960 ALDH1B1P30837 517 aa19.82■□□□□ 0.76
NUP50-219ENST00000497960 TCIRG1Q13488 830 aa19.81■□□□□ 0.76
NUP50-219ENST00000497960 ANKRD13DQ6ZTN6 518 aa19.81■□□□□ 0.76
NUP50-219ENST00000497960 PLBD2Q8NHP8 589 aa19.81■□□□□ 0.76
NUP50-219ENST00000497960 ZC3H4Q9UPT8 1303 aaKnown RBP19.8■□□□□ 0.76
NUP50-219ENST00000497960 CRY2Q49AN0 593 aa19.8■□□□□ 0.76
NUP50-219ENST00000497960 C8orf58Q8NAV2 365 aa19.8■□□□□ 0.76
NUP50-219ENST00000497960 RPGRQ92834 1020 aaKnown RBP19.8■□□□□ 0.76
NUP50-219ENST00000497960 TAOK3Q9H2K8 898 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms