RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 PARP3Q9Y6F1 533 aa9.75□□□□□ -0.85
MSH5-219ENST00000497269 MLECQ14165 292 aa9.74□□□□□ -0.85
MSH5-219ENST00000497269 LYSMD3Q7Z3D4 306 aa9.74□□□□□ -0.85
MSH5-219ENST00000497269 SLC9A9Q8IVB4 645 aa9.74□□□□□ -0.85
MSH5-219ENST00000497269 TRIM47Q96LD4 638 aa9.74□□□□□ -0.85
MSH5-219ENST00000497269 CABP1Q9NZU7 370 aa9.74□□□□□ -0.85
MSH5-219ENST00000497269 SAMD9Q5K651 1589 aa9.74□□□□□ -0.85
MSH5-219ENST00000497269 NUP153P49790 1475 aaKnown RBP9.73□□□□□ -0.85
MSH5-219ENST00000497269 SCG3Q8WXD2 468 aaKnown RBP9.73□□□□□ -0.85
MSH5-219ENST00000497269 SLC4A9Q96Q91 983 aa9.73□□□□□ -0.85
MSH5-219ENST00000497269 GRIP2Q9C0E4 1043 aa9.73□□□□□ -0.85
MSH5-219ENST00000497269 ARAP3Q8WWN8 1544 aa9.72□□□□□ -0.85
MSH5-219ENST00000497269 ABCA9Q8IUA7 1624 aa9.72□□□□□ -0.85
MSH5-219ENST00000497269 GPC1P35052 558 aa9.72□□□□□ -0.85
MSH5-219ENST00000497269 PLA2G4AP47712 749 aa9.72□□□□□ -0.85
MSH5-219ENST00000497269 EPHA4P54764 986 aa9.72□□□□□ -0.85
MSH5-219ENST00000497269 GNASQ5JWF2 1037 aa9.72□□□□□ -0.85
MSH5-219ENST00000497269 KIFC2Q96AC6 838 aa9.72□□□□□ -0.85
MSH5-219ENST00000497269 SCHIP1Q9P0W5 487 aaPredicted RBP9.72□□□□□ -0.85
MSH5-219ENST00000497269 TMEM88BA6NKF7 163 aa9.71□□□□□ -0.86
MSH5-219ENST00000497269 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.71□□□□□ -0.86
MSH5-219ENST00000497269 C4orf17Q53FE4 359 aa9.71□□□□□ -0.86
MSH5-219ENST00000497269 M0R2N6 131 aa9.7□□□□□ -0.86
MSH5-219ENST00000497269 PPP1R12BO60237 982 aaPredicted RBP9.7□□□□□ -0.86
MSH5-219ENST00000497269 MTFR1Q15390 333 aa9.7□□□□□ -0.86
MSH5-219ENST00000497269 SH3PXD2AQ5TCZ1 1133 aa9.7□□□□□ -0.86
MSH5-219ENST00000497269 TAS1R3Q7RTX0 852 aa9.7□□□□□ -0.86
MSH5-219ENST00000497269 RHBDD1Q8TEB9 315 aa9.7□□□□□ -0.86
MSH5-219ENST00000497269 AIDAQ96BJ3 306 aa9.7□□□□□ -0.86
MSH5-219ENST00000497269 SLAIN2Q9P270 581 aa9.7□□□□□ -0.86
MSH5-219ENST00000497269 ZNF232Q9UNY5 417 aa9.7□□□□□ -0.86
MSH5-219ENST00000497269 CDK13Q14004 1512 aaKnown RBP9.7□□□□□ -0.86
MSH5-219ENST00000497269 HSPA2P54652 639 aa9.69□□□□□ -0.86
MSH5-219ENST00000497269 ZNF787Q6DD87 383 aa9.69□□□□□ -0.86
MSH5-219ENST00000497269 NBPF10Q6P3W6 841 aaKnown RBP9.69□□□□□ -0.86
MSH5-219ENST00000497269 ATAD2Q6PL18 1390 aa9.69□□□□□ -0.86
MSH5-219ENST00000497269 PPARGC1BQ86YN6 1023 aaKnown RBP9.69□□□□□ -0.86
MSH5-219ENST00000497269 NBPF15Q8N660 670 aa9.69□□□□□ -0.86
MSH5-219ENST00000497269 MKNK1Q9BUB5 465 aa9.69□□□□□ -0.86
MSH5-219ENST00000497269 IQSEC3Q9UPP2 1182 aaPredicted RBP9.69□□□□□ -0.86
MSH5-219ENST00000497269 PTPRMP28827 1452 aa9.68□□□□□ -0.86
MSH5-219ENST00000497269 AKNAQ7Z591 1439 aa9.68□□□□□ -0.86
MSH5-219ENST00000497269 CDK2AP1O14519 115 aa9.68□□□□□ -0.86
MSH5-219ENST00000497269 FOXK2Q01167 660 aa9.68□□□□□ -0.86
MSH5-219ENST00000497269 SWI5Q1ZZU3 235 aa9.68□□□□□ -0.86
MSH5-219ENST00000497269 NIFKQ9BYG3 293 aaKnown RBP9.68□□□□□ -0.86
MSH5-219ENST00000497269 FRMPD1Q5SYB0 1578 aa9.67□□□□□ -0.86
MSH5-219ENST00000497269 C21orf2O43822 256 aa9.67□□□□□ -0.86
MSH5-219ENST00000497269 SCNN1AP37088 669 aa9.67□□□□□ -0.86
MSH5-219ENST00000497269 PTSQ03393 145 aa9.67□□□□□ -0.86
MSH5-219ENST00000497269 ZDHHC1Q8WTX9 485 aa9.67□□□□□ -0.86
MSH5-219ENST00000497269 NGLY1Q96IV0 654 aa9.67□□□□□ -0.86
MSH5-219ENST00000497269 GAS2L1Q99501 681 aaPredicted RBP9.67□□□□□ -0.86
MSH5-219ENST00000497269 GPAMQ9HCL2 828 aa9.67□□□□□ -0.86
MSH5-219ENST00000497269 TIMMDC1Q9NPL8 285 aa9.67□□□□□ -0.86
MSH5-219ENST00000497269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.66□□□□□ -0.86
MSH5-219ENST00000497269 FANCAO15360 1455 aa9.66□□□□□ -0.86
MSH5-219ENST00000497269 DENND4BO75064 1496 aaPredicted RBP9.66□□□□□ -0.86
MSH5-219ENST00000497269 NEO1Q92859 1461 aa9.66□□□□□ -0.86
MSH5-219ENST00000497269 EEA1Q15075 1411 aa9.66□□□□□ -0.86
MSH5-219ENST00000497269 ATP2B4P23634 1241 aa9.66□□□□□ -0.86
MSH5-219ENST00000497269 CHMP3Q9Y3E7 222 aa9.66□□□□□ -0.86
MSH5-219ENST00000497269 HCN4Q9Y3Q4 1203 aa9.66□□□□□ -0.86
MSH5-219ENST00000497269 MADDQ8WXG6 1647 aa9.66□□□□□ -0.86
MSH5-219ENST00000497269 TTC37Q6PGP7 1564 aa9.66□□□□□ -0.86
MSH5-219ENST00000497269 YEATS2Q9ULM3 1422 aa9.65□□□□□ -0.86
MSH5-219ENST00000497269 PHLDB1Q86UU1 1377 aa9.65□□□□□ -0.86
MSH5-219ENST00000497269 ADAMTSL3P82987 1691 aa9.65□□□□□ -0.86
MSH5-219ENST00000497269 SPATA31C2B4DYI2 1134 aa9.65□□□□□ -0.86
MSH5-219ENST00000497269 VEGFBP49765 207 aa9.65□□□□□ -0.86
MSH5-219ENST00000497269 PSMA6P60900 246 aaKnown RBP9.65□□□□□ -0.86
MSH5-219ENST00000497269 CLP1Q92989 425 aaKnown RBP9.65□□□□□ -0.86
MSH5-219ENST00000497269 L3MBTL2Q969R5 705 aa9.65□□□□□ -0.86
MSH5-219ENST00000497269 USTQ9Y2C2 406 aa9.65□□□□□ -0.86
MSH5-219ENST00000497269 BCORL1Q5H9F3 1711 aa9.65□□□□□ -0.87
MSH5-219ENST00000497269 RIMS1Q86UR5 1692 aaKnown RBP9.64□□□□□ -0.87
MSH5-219ENST00000497269 SERTM1A2A2V5 107 aa9.64□□□□□ -0.87
MSH5-219ENST00000497269 NOS2P35228 1153 aa9.64□□□□□ -0.87
MSH5-219ENST00000497269 TXLNAP40222 546 aa9.64□□□□□ -0.87
MSH5-219ENST00000497269 CEBPAP49715 358 aaPredicted RBP9.64□□□□□ -0.87
MSH5-219ENST00000497269 FKBP5Q13451 457 aaPredicted RBP9.64□□□□□ -0.87
MSH5-219ENST00000497269 VTI1AQ96AJ9 217 aa9.64□□□□□ -0.87
MSH5-219ENST00000497269 SCAPERQ9BY12 1400 aa9.64□□□□□ -0.87
MSH5-219ENST00000497269 SIGLEC1Q9BZZ2 1709 aa9.63□□□□□ -0.87
MSH5-219ENST00000497269 IGFBP4P22692 258 aa9.63□□□□□ -0.87
MSH5-219ENST00000497269 WEE1P30291 646 aa9.63□□□□□ -0.87
MSH5-219ENST00000497269 OCLNQ16625 522 aa9.63□□□□□ -0.87
MSH5-219ENST00000497269 RIPOR1Q6ZS17 1223 aa9.63□□□□□ -0.87
MSH5-219ENST00000497269 CXXC1Q9P0U4 656 aaPredicted RBP9.63□□□□□ -0.87
MSH5-219ENST00000497269 RICTORQ6R327 1708 aa9.62□□□□□ -0.87
MSH5-219ENST00000497269 SENP3-EIF4A1A0A087X0R7 540 aa9.62□□□□□ -0.87
MSH5-219ENST00000497269 TEAD4Q15561 434 aa9.62□□□□□ -0.87
MSH5-219ENST00000497269 CAPN12Q6ZSI9 719 aa9.62□□□□□ -0.87
MSH5-219ENST00000497269 ZNF295-AS1Q8N0V1 137 aa9.62□□□□□ -0.87
MSH5-219ENST00000497269 AFAP1Q8N556 730 aa9.62□□□□□ -0.87
MSH5-219ENST00000497269 ARHGAP35Q9NRY4 1499 aa9.61□□□□□ -0.87
MSH5-219ENST00000497269 EML1O00423 815 aa9.61□□□□□ -0.87
MSH5-219ENST00000497269 NAA30Q147X3 362 aaPredicted RBP9.61□□□□□ -0.87
MSH5-219ENST00000497269 NBPF1Q3BBV0 1214 aa9.61□□□□□ -0.87
MSH5-219ENST00000497269 EFCAB2Q5VUJ9 269 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms