RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 TNFRSF10BO14763 440 aa5.87□□□□□ -1.47
EXOSC3-208ENST00000496910 PTSQ03393 145 aa5.87□□□□□ -1.47
EXOSC3-208ENST00000496910 ECM1Q16610 540 aa5.87□□□□□ -1.47
EXOSC3-208ENST00000496910 GNASQ5JWF2 1037 aa5.87□□□□□ -1.47
EXOSC3-208ENST00000496910 MYO19Q96H55 970 aa5.87□□□□□ -1.47
EXOSC3-208ENST00000496910 MKNK1Q9BUB5 465 aa5.87□□□□□ -1.47
EXOSC3-208ENST00000496910 ZDHHC3Q9NYG2 299 aa5.87□□□□□ -1.47
EXOSC3-208ENST00000496910 LRFN2Q9ULH4 789 aa5.87□□□□□ -1.47
EXOSC3-208ENST00000496910 MTMR7Q9Y216 660 aa5.87□□□□□ -1.47
EXOSC3-208ENST00000496910 IQSEC2Q5JU85 1478 aa5.86□□□□□ -1.47
EXOSC3-208ENST00000496910 ABCC10Q5T3U5 1492 aa5.86□□□□□ -1.47
EXOSC3-208ENST00000496910 MAN1A2O60476 641 aa5.86□□□□□ -1.47
EXOSC3-208ENST00000496910 MSX1P28360 303 aa5.86□□□□□ -1.47
EXOSC3-208ENST00000496910 SERPINB4P48594 390 aa5.86□□□□□ -1.47
EXOSC3-208ENST00000496910 KCNA1Q09470 495 aa5.86□□□□□ -1.47
EXOSC3-208ENST00000496910 UBAP2LQ14157 1087 aaKnown RBP5.86□□□□□ -1.47
EXOSC3-208ENST00000496910 COX20Q5RI15 118 aa5.86□□□□□ -1.47
EXOSC3-208ENST00000496910 C1orf53Q5VUE5 145 aa5.86□□□□□ -1.47
EXOSC3-208ENST00000496910 CHMP7Q8WUX9 453 aaPredicted RBP5.86□□□□□ -1.47
EXOSC3-208ENST00000496910 CUEDC1Q9NWM3 386 aaPredicted RBP5.86□□□□□ -1.47
EXOSC3-208ENST00000496910 BCS1LQ9Y276 419 aa5.86□□□□□ -1.47
EXOSC3-208ENST00000496910 DYRK1BQ9Y463 629 aa5.86□□□□□ -1.47
EXOSC3-208ENST00000496910 CEP350Q5VT06 3117 aa5.85□□□□□ -1.47
EXOSC3-208ENST00000496910 A0A1B0GTH6 734 aa5.85□□□□□ -1.47
EXOSC3-208ENST00000496910 PTCD1O75127 700 aaKnown RBP5.85□□□□□ -1.47
EXOSC3-208ENST00000496910 B4GALNT3Q6L9W6 998 aa5.85□□□□□ -1.47
EXOSC3-208ENST00000496910 ALDH16A1Q8IZ83 802 aa5.85□□□□□ -1.47
EXOSC3-208ENST00000496910 ZNF428Q96B54 188 aa5.85□□□□□ -1.47
EXOSC3-208ENST00000496910 PHACTR1Q9C0D0 580 aa5.85□□□□□ -1.47
EXOSC3-208ENST00000496910 CRISPLD1Q9H336 500 aa5.85□□□□□ -1.47
EXOSC3-208ENST00000496910 TIMMDC1Q9NPL8 285 aa5.85□□□□□ -1.47
EXOSC3-208ENST00000496910 HCN2Q9UL51 889 aa5.85□□□□□ -1.47
EXOSC3-208ENST00000496910 HCN4Q9Y3Q4 1203 aa5.85□□□□□ -1.47
EXOSC3-208ENST00000496910 DNMT3AQ9Y6K1 912 aaPredicted RBP5.85□□□□□ -1.47
EXOSC3-208ENST00000496910 NCAPD3P42695 1498 aa5.84□□□□□ -1.47
EXOSC3-208ENST00000496910 PTPRTO14522 1441 aa5.84□□□□□ -1.47
EXOSC3-208ENST00000496910 C11orf95C9JLR9 678 aaPredicted RBP5.84□□□□□ -1.47
EXOSC3-208ENST00000496910 UBAP1LF5GYI3 381 aa5.84□□□□□ -1.47
EXOSC3-208ENST00000496910 RTN1Q16799 776 aa5.84□□□□□ -1.47
EXOSC3-208ENST00000496910 AEBP1Q8IUX7 1158 aa5.84□□□□□ -1.47
EXOSC3-208ENST00000496910 CCDC155Q8N6L0 562 aa5.84□□□□□ -1.47
EXOSC3-208ENST00000496910 ZIC5Q96T25 663 aa5.84□□□□□ -1.47
EXOSC3-208ENST00000496910 ZNF232Q9UNY5 417 aa5.84□□□□□ -1.47
EXOSC3-208ENST00000496910 PTPRMP28827 1452 aa5.83□□□□□ -1.48
EXOSC3-208ENST00000496910 NPR3P17342 541 aa5.83□□□□□ -1.48
EXOSC3-208ENST00000496910 ARID4AP29374 1257 aaPredicted RBP5.83□□□□□ -1.48
EXOSC3-208ENST00000496910 NAA30Q147X3 362 aaPredicted RBP5.83□□□□□ -1.48
EXOSC3-208ENST00000496910 C16orf46Q6P387 395 aa5.83□□□□□ -1.48
EXOSC3-208ENST00000496910 HELQQ8TDG4 1101 aa5.83□□□□□ -1.48
EXOSC3-208ENST00000496910 GTF3C2Q8WUA4 911 aaPredicted RBP5.83□□□□□ -1.48
EXOSC3-208ENST00000496910 FOXD4L4Q8WXT5 416 aaPredicted RBP5.83□□□□□ -1.48
EXOSC3-208ENST00000496910 EGFL7Q9UHF1 273 aa5.83□□□□□ -1.48
EXOSC3-208ENST00000496910 DMGDHQ9UI17 866 aaKnown RBP5.83□□□□□ -1.48
EXOSC3-208ENST00000496910 GPC6Q9Y625 555 aaPredicted RBP5.83□□□□□ -1.48
EXOSC3-208ENST00000496910 IVNS1ABPQ9Y6Y0 642 aa5.83□□□□□ -1.48
EXOSC3-208ENST00000496910 F11P03951 625 aa5.82□□□□□ -1.48
EXOSC3-208ENST00000496910 GTF2E1P29083 439 aaPredicted RBP5.82□□□□□ -1.48
EXOSC3-208ENST00000496910 MTMR3Q13615 1198 aa5.82□□□□□ -1.48
EXOSC3-208ENST00000496910 NBPF1Q3BBV0 1214 aa5.82□□□□□ -1.48
EXOSC3-208ENST00000496910 ZNF280CQ8ND82 737 aa5.82□□□□□ -1.48
EXOSC3-208ENST00000496910 NGLY1Q96IV0 654 aa5.82□□□□□ -1.48
EXOSC3-208ENST00000496910 SETBP1Q9Y6X0 1596 aa5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 PPFIA3O75145 1194 aa5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 GRNP28799 593 aaKnown RBP5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 PRELPP51888 382 aa5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 MFAP1P55081 439 aaKnown RBP5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 ZNF211Q13398 564 aaPredicted RBP5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 DBN1Q16643 649 aa5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 LCE2CQ5TA81 110 aa5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 TMCO4Q5TGY1 634 aa5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 ETFBKMTQ8IXQ9 262 aa5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 HSH2DQ96JZ2 352 aa5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 RUBCNLQ9H714 662 aa5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 GPAMQ9HCL2 828 aa5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 NDFIP2Q9NV92 336 aa5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 KLK14Q9P0G3 267 aa5.81□□□□□ -1.48
EXOSC3-208ENST00000496910 DIP2BQ9P265 1576 aa5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 CLASP1Q7Z460 1538 aa5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 A0A1W2PNR3 127 aa5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 SOWAHDA6NJG2 315 aa5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 ZBTB39O15060 712 aa5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 ICMTO60725 284 aa5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 ITGA6P23229 1130 aa5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 RBM25P49756 843 aaKnown RBP5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 ARHGAP4P98171 946 aa5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 DGKZQ13574 1117 aa5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 AIDAQ96BJ3 306 aa5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 ZNF837Q96EG3 531 aaPredicted RBP5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 SUSD3Q96L08 255 aa5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 CHMP3Q9Y3E7 222 aa5.8□□□□□ -1.48
EXOSC3-208ENST00000496910 TTBK1Q5TCY1 1321 aaPredicted RBP5.79□□□□□ -1.48
EXOSC3-208ENST00000496910 SCRIBQ14160 1630 aa5.79□□□□□ -1.48
EXOSC3-208ENST00000496910 TATP17735 454 aaPredicted RBP5.79□□□□□ -1.48
EXOSC3-208ENST00000496910 C1QTNF8P60827 252 aa5.79□□□□□ -1.48
EXOSC3-208ENST00000496910 SAMD5Q5TGI4 173 aa5.79□□□□□ -1.48
EXOSC3-208ENST00000496910 IER5Q5VY09 327 aa5.79□□□□□ -1.48
EXOSC3-208ENST00000496910 TRIM22Q8IYM9 498 aa5.79□□□□□ -1.48
EXOSC3-208ENST00000496910 CCER1Q8TC90 406 aaPredicted RBP5.79□□□□□ -1.48
EXOSC3-208ENST00000496910 RHPN1Q8TCX5 695 aa5.79□□□□□ -1.48
EXOSC3-208ENST00000496910 NANOS1Q8WY41 292 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms