RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 IL16Q14005 1332 aa10.5□□□□□ -0.73
SMARCD3-215ENST00000496530 CARMIL3Q8ND23 1372 aa10.5□□□□□ -0.73
SMARCD3-215ENST00000496530 POLRMTO00411 1230 aaKnown RBP10.49□□□□□ -0.73
SMARCD3-215ENST00000496530 CAMTA2O94983 1202 aa10.49□□□□□ -0.73
SMARCD3-215ENST00000496530 NFIXQ14938 502 aa10.49□□□□□ -0.73
SMARCD3-215ENST00000496530 NLGN2Q8NFZ4 835 aa10.49□□□□□ -0.73
SMARCD3-215ENST00000496530 NECTIN2Q92692 538 aa10.49□□□□□ -0.73
SMARCD3-215ENST00000496530 PDZRN3Q9UPQ7 1066 aa10.49□□□□□ -0.73
SMARCD3-215ENST00000496530 KIF13BQ9NQT8 1826 aa10.49□□□□□ -0.73
SMARCD3-215ENST00000496530 C10orf71Q711Q0 1435 aa10.49□□□□□ -0.73
SMARCD3-215ENST00000496530 NBPF26B4DH59 902 aa10.48□□□□□ -0.73
SMARCD3-215ENST00000496530 ERVV-1B6SEH8 477 aa10.48□□□□□ -0.73
SMARCD3-215ENST00000496530 TCERG1O14776 1098 aaKnown RBP10.48□□□□□ -0.73
SMARCD3-215ENST00000496530 ZNF853P0CG23 659 aa10.48□□□□□ -0.73
SMARCD3-215ENST00000496530 GTF2E1P29083 439 aaPredicted RBP10.48□□□□□ -0.73
SMARCD3-215ENST00000496530 DUSP27Q5VZP5 1158 aa10.48□□□□□ -0.73
SMARCD3-215ENST00000496530 TBC1D9BQ66K14 1250 aa10.48□□□□□ -0.73
SMARCD3-215ENST00000496530 NBPF10Q6P3W6 841 aaKnown RBP10.48□□□□□ -0.73
SMARCD3-215ENST00000496530 NBPF15Q8N660 670 aa10.48□□□□□ -0.73
SMARCD3-215ENST00000496530 DBF4Q9UBU7 674 aaPredicted RBP10.48□□□□□ -0.73
SMARCD3-215ENST00000496530 MAP3K15Q6ZN16 1313 aa10.48□□□□□ -0.73
SMARCD3-215ENST00000496530 PDE6BP35913 854 aa10.47□□□□□ -0.73
SMARCD3-215ENST00000496530 DDR1Q08345 913 aa10.47□□□□□ -0.73
SMARCD3-215ENST00000496530 HSP90AB3PQ58FF7 597 aa10.47□□□□□ -0.73
SMARCD3-215ENST00000496530 CCDC30Q5VVM6 783 aa10.47□□□□□ -0.73
SMARCD3-215ENST00000496530 TPTE2Q6XPS3 522 aa10.47□□□□□ -0.73
SMARCD3-215ENST00000496530 NBPF5PQ86XG9 351 aaPredicted RBP10.47□□□□□ -0.73
SMARCD3-215ENST00000496530 CNBD1Q8NA66 436 aa10.47□□□□□ -0.73
SMARCD3-215ENST00000496530 C8orf58Q8NAV2 365 aa10.47□□□□□ -0.73
SMARCD3-215ENST00000496530 NYXQ9GZU5 481 aa10.47□□□□□ -0.73
SMARCD3-215ENST00000496530 BCL2L12Q9HB09 334 aa10.47□□□□□ -0.73
SMARCD3-215ENST00000496530 DDX21Q9NR30 783 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMARCD3-215ENST00000496530 NIP7Q9Y221 180 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMARCD3-215ENST00000496530 ZNF521Q96K83 1311 aa10.47□□□□□ -0.73
SMARCD3-215ENST00000496530 KRT24Q2M2I5 525 aa10.46□□□□□ -0.73
SMARCD3-215ENST00000496530 PPP1R42Q7Z4L9 355 aa10.46□□□□□ -0.73
SMARCD3-215ENST00000496530 STK31Q9BXU1 1019 aa10.46□□□□□ -0.73
SMARCD3-215ENST00000496530 ZBTB3Q9H5J0 574 aa10.46□□□□□ -0.73
SMARCD3-215ENST00000496530 HYPKQ9NX55 129 aa10.46□□□□□ -0.73
SMARCD3-215ENST00000496530 PIM2Q9P1W9 311 aa10.46□□□□□ -0.73
SMARCD3-215ENST00000496530 NRXN2Q9P2S2 1712 aa10.46□□□□□ -0.74
SMARCD3-215ENST00000496530 AFDNP55196 1824 aaKnown RBP10.46□□□□□ -0.74
SMARCD3-215ENST00000496530 N4BP2Q86UW6 1770 aaPredicted RBP10.45□□□□□ -0.74
SMARCD3-215ENST00000496530 FANCIQ9NVI1 1328 aa10.45□□□□□ -0.74
SMARCD3-215ENST00000496530 H0YIN7 160 aa10.45□□□□□ -0.74
SMARCD3-215ENST00000496530 DDX58O95786 925 aaKnown RBP10.45□□□□□ -0.74
SMARCD3-215ENST00000496530 AIMP1Q12904 312 aaKnown RBP10.45□□□□□ -0.74
SMARCD3-215ENST00000496530 TWISTNBQ3B726 338 aaPredicted RBP10.45□□□□□ -0.74
SMARCD3-215ENST00000496530 PARP10Q53GL7 1025 aa10.45□□□□□ -0.74
SMARCD3-215ENST00000496530 GIGYF2Q6Y7W6 1299 aaKnown RBP10.45□□□□□ -0.74
SMARCD3-215ENST00000496530 TRMT2AQ8IZ69 625 aaKnown RBP10.45□□□□□ -0.74
SMARCD3-215ENST00000496530 TSPYL6Q8N831 410 aa10.45□□□□□ -0.74
SMARCD3-215ENST00000496530 CHPF2Q9P2E5 772 aa10.45□□□□□ -0.74
SMARCD3-215ENST00000496530 NUP98P52948 1817 aa10.44□□□□□ -0.74
SMARCD3-215ENST00000496530 PXDNLA1KZ92 1463 aa10.44□□□□□ -0.74
SMARCD3-215ENST00000496530 A0A0G2JLW4 131 aa10.44□□□□□ -0.74
SMARCD3-215ENST00000496530 DPEP1P16444 411 aa10.44□□□□□ -0.74
SMARCD3-215ENST00000496530 YY1P25490 414 aa10.44□□□□□ -0.74
SMARCD3-215ENST00000496530 TTLL7Q6ZT98 887 aa10.44□□□□□ -0.74
SMARCD3-215ENST00000496530 COPS6Q7L5N1 327 aa10.44□□□□□ -0.74
SMARCD3-215ENST00000496530 BRIP1Q9BX63 1249 aa10.44□□□□□ -0.74
SMARCD3-215ENST00000496530 RCAN3Q9UKA8 241 aa10.44□□□□□ -0.74
SMARCD3-215ENST00000496530 BCS1LQ9Y276 419 aa10.44□□□□□ -0.74
SMARCD3-215ENST00000496530 SUPT16HQ9Y5B9 1047 aaKnown RBP10.44□□□□□ -0.74
SMARCD3-215ENST00000496530 ATP10DQ9P241 1426 aa10.43□□□□□ -0.74
SMARCD3-215ENST00000496530 FAM177BA6PVY3 158 aa10.43□□□□□ -0.74
SMARCD3-215ENST00000496530 VAMP4O75379 141 aa10.43□□□□□ -0.74
SMARCD3-215ENST00000496530 PDIA6Q15084 440 aa10.43□□□□□ -0.74
SMARCD3-215ENST00000496530 HLFQ16534 295 aa10.43□□□□□ -0.74
SMARCD3-215ENST00000496530 DALRD3Q5D0E6 543 aaKnown RBP10.43□□□□□ -0.74
SMARCD3-215ENST00000496530 PRR5LQ6MZQ0 368 aa10.43□□□□□ -0.74
SMARCD3-215ENST00000496530 C2CD5Q86YS7 1000 aa10.43□□□□□ -0.74
SMARCD3-215ENST00000496530 XAGE3Q8WTP9 111 aa10.43□□□□□ -0.74
SMARCD3-215ENST00000496530 FRAT1Q92837 279 aaPredicted RBP10.43□□□□□ -0.74
SMARCD3-215ENST00000496530 BCL2L13Q9BXK5 485 aa10.43□□□□□ -0.74
SMARCD3-215ENST00000496530 CHD4Q14839 1912 aa10.43□□□□□ -0.74
SMARCD3-215ENST00000496530 ANXA1P04083 346 aa10.42□□□□□ -0.74
SMARCD3-215ENST00000496530 ANKRD13DQ6ZTN6 518 aa10.42□□□□□ -0.74
SMARCD3-215ENST00000496530 RIC3Q7Z5B4 369 aa10.42□□□□□ -0.74
SMARCD3-215ENST00000496530 TTLL6Q8N841 843 aa10.42□□□□□ -0.74
SMARCD3-215ENST00000496530 PLBD2Q8NHP8 589 aa10.42□□□□□ -0.74
SMARCD3-215ENST00000496530 ZNF622Q969S3 477 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMARCD3-215ENST00000496530 WWC3Q9ULE0 1092 aa10.42□□□□□ -0.74
SMARCD3-215ENST00000496530 ANKRD36CQ5JPF3 1778 aa10.42□□□□□ -0.74
SMARCD3-215ENST00000496530 IBTKQ9P2D0 1353 aaPredicted RBP10.41□□□□□ -0.74
SMARCD3-215ENST00000496530 RNF123Q5XPI4 1314 aa10.41□□□□□ -0.74
SMARCD3-215ENST00000496530 BCAR3O75815 825 aa10.41□□□□□ -0.74
SMARCD3-215ENST00000496530 SLC4A2P04920 1241 aa10.41□□□□□ -0.74
SMARCD3-215ENST00000496530 YBX3P16989 372 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMARCD3-215ENST00000496530 GPTP24298 496 aa10.41□□□□□ -0.74
SMARCD3-215ENST00000496530 CHRNA5P30532 468 aa10.41□□□□□ -0.74
SMARCD3-215ENST00000496530 PROSER3Q2NL68 480 aa10.41□□□□□ -0.74
SMARCD3-215ENST00000496530 CNKSR1Q969H4 720 aa10.41□□□□□ -0.74
SMARCD3-215ENST00000496530 MASTLQ96GX5 879 aa10.41□□□□□ -0.74
SMARCD3-215ENST00000496530 DLEC1Q9Y238 1755 aa10.41□□□□□ -0.74
SMARCD3-215ENST00000496530 KIAA1551Q9HCM1 1747 aa10.41□□□□□ -0.74
SMARCD3-215ENST00000496530 PLIN1O60240 522 aa10.4□□□□□ -0.74
SMARCD3-215ENST00000496530 HSP90B1P14625 803 aaKnown RBP10.4□□□□□ -0.74
SMARCD3-215ENST00000496530 NEXNQ0ZGT2 675 aa10.4□□□□□ -0.74
SMARCD3-215ENST00000496530 TCIRG1Q13488 830 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms