RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 SALL2Q9Y467 1007 aaPredicted RBP23.84■■□□□ 1.41
COPS6-210ENST00000496358 GRIN3BO60391 1043 aa23.83■■□□□ 1.41
COPS6-210ENST00000496358 DPEP1P16444 411 aa23.83■■□□□ 1.41
COPS6-210ENST00000496358 KIF6Q6ZMV9 814 aa23.83■■□□□ 1.41
COPS6-210ENST00000496358 NUP98P52948 1817 aa23.82■■□□□ 1.4
COPS6-210ENST00000496358 HOXB7P09629 217 aa23.82■■□□□ 1.4
COPS6-210ENST00000496358 PDIA6Q15084 440 aa23.82■■□□□ 1.4
COPS6-210ENST00000496358 RGL2O15211 777 aa23.81■■□□□ 1.4
COPS6-210ENST00000496358 HLFQ16534 295 aa23.81■■□□□ 1.4
COPS6-210ENST00000496358 HDGFL1Q5TGJ6 251 aa23.81■■□□□ 1.4
COPS6-210ENST00000496358 DUSP27Q5VZP5 1158 aa23.81■■□□□ 1.4
COPS6-210ENST00000496358 TTLL7Q6ZT98 887 aa23.81■■□□□ 1.4
COPS6-210ENST00000496358 MAP3K15Q6ZN16 1313 aa23.81■■□□□ 1.4
COPS6-210ENST00000496358 ERVV-1B6SEH8 477 aa23.8■■□□□ 1.4
COPS6-210ENST00000496358 NPHP1O15259 732 aa23.8■■□□□ 1.4
COPS6-210ENST00000496358 ANXA1P04083 346 aa23.8■■□□□ 1.4
COPS6-210ENST00000496358 PROSER3Q2NL68 480 aa23.8■■□□□ 1.4
COPS6-210ENST00000496358 NIP7Q9Y221 180 aaKnown RBP eCLIP23.79■■□□□ 1.4
COPS6-210ENST00000496358 BRCA1P38398 1863 aaKnown RBP23.79■■□□□ 1.4
COPS6-210ENST00000496358 ELL2O00472 640 aaPredicted RBP23.78■■□□□ 1.4
COPS6-210ENST00000496358 PRR5LQ6MZQ0 368 aa23.78■■□□□ 1.4
COPS6-210ENST00000496358 CNBD1Q8NA66 436 aa23.78■■□□□ 1.4
COPS6-210ENST00000496358 ZBTB3Q9H5J0 574 aa23.78■■□□□ 1.4
COPS6-210ENST00000496358 DDX21Q9NR30 783 aaKnown RBP eCLIP23.78■■□□□ 1.4
COPS6-210ENST00000496358 KCNA3P22001 575 aa23.77■■□□□ 1.4
COPS6-210ENST00000496358 CHRNA5P30532 468 aa23.77■■□□□ 1.4
COPS6-210ENST00000496358 LRP10Q7Z4F1 713 aa23.77■■□□□ 1.4
COPS6-210ENST00000496358 NBPF5PQ86XG9 351 aaPredicted RBP23.77■■□□□ 1.4
COPS6-210ENST00000496358 CHPF2Q9P2E5 772 aa23.77■■□□□ 1.4
COPS6-210ENST00000496358 BCS1LQ9Y276 419 aa23.77■■□□□ 1.4
COPS6-210ENST00000496358 IL16Q14005 1332 aa23.77■■□□□ 1.4
COPS6-210ENST00000496358 GOLGB1Q14789 3259 aaKnown RBP23.76■■□□□ 1.39
COPS6-210ENST00000496358 CCER2I3L3R5 266 aa23.76■■□□□ 1.39
COPS6-210ENST00000496358 AIMP1Q12904 312 aaKnown RBP23.76■■□□□ 1.39
COPS6-210ENST00000496358 CCDC24Q8N4L8 307 aa23.76■■□□□ 1.39
COPS6-210ENST00000496358 TSR2Q969E8 191 aaKnown RBP23.76■■□□□ 1.39
COPS6-210ENST00000496358 PIM2Q9P1W9 311 aa23.76■■□□□ 1.39
COPS6-210ENST00000496358 ANKRD31Q8N7Z5 1873 aa23.75■■□□□ 1.39
COPS6-210ENST00000496358 ST5P78524 1137 aa23.75■■□□□ 1.39
COPS6-210ENST00000496358 COPS6Q7L5N1 327 aa23.75■■□□□ 1.39
COPS6-210ENST00000496358 WDR63Q8IWG1 891 aa23.75■■□□□ 1.39
COPS6-210ENST00000496358 C8orf58Q8NAV2 365 aa23.75■■□□□ 1.39
COPS6-210ENST00000496358 DBF4Q9UBU7 674 aaPredicted RBP23.75■■□□□ 1.39
COPS6-210ENST00000496358 FAM177BA6PVY3 158 aa23.74■■□□□ 1.39
COPS6-210ENST00000496358 DIEXFQ68CQ4 756 aaKnown RBP23.74■■□□□ 1.39
COPS6-210ENST00000496358 XAGE3Q8WTP9 111 aa23.74■■□□□ 1.39
COPS6-210ENST00000496358 BRIP1Q9BX63 1249 aa23.74■■□□□ 1.39
COPS6-210ENST00000496358 H0YIN7 160 aa23.73■■□□□ 1.39
COPS6-210ENST00000496358 PDE6BP35913 854 aa23.73■■□□□ 1.39
COPS6-210ENST00000496358 TPTE2Q6XPS3 522 aa23.73■■□□□ 1.39
COPS6-210ENST00000496358 GIGYF2Q6Y7W6 1299 aaKnown RBP23.73■■□□□ 1.39
COPS6-210ENST00000496358 C2CD5Q86YS7 1000 aa23.73■■□□□ 1.39
COPS6-210ENST00000496358 DALRD3Q5D0E6 543 aaKnown RBP23.72■■□□□ 1.39
COPS6-210ENST00000496358 CHMP4AQ9BY43 222 aa23.72■■□□□ 1.39
COPS6-210ENST00000496358 DLEC1Q9Y238 1755 aa23.72■■□□□ 1.39
COPS6-210ENST00000496358 ARFGEF1Q9Y6D6 1849 aa23.72■■□□□ 1.39
COPS6-210ENST00000496358 ATP10DQ9P241 1426 aa23.71■■□□□ 1.39
COPS6-210ENST00000496358 GPTP24298 496 aa23.71■■□□□ 1.39
COPS6-210ENST00000496358 GTF2E1P29083 439 aaPredicted RBP23.71■■□□□ 1.39
COPS6-210ENST00000496358 HYPKQ9NX55 129 aa23.71■■□□□ 1.39
COPS6-210ENST00000496358 TSPYL6Q8N831 410 aa23.7■■□□□ 1.38
COPS6-210ENST00000496358 PDZRN3Q9UPQ7 1066 aa23.7■■□□□ 1.38
COPS6-210ENST00000496358 ZNF34Q8IZ26 560 aa23.69■■□□□ 1.38
COPS6-210ENST00000496358 NYXQ9GZU5 481 aa23.69■■□□□ 1.38
COPS6-210ENST00000496358 ANKRD36CQ5JPF3 1778 aa23.68■■□□□ 1.38
COPS6-210ENST00000496358 CCDC30Q5VVM6 783 aa23.68■■□□□ 1.38
COPS6-210ENST00000496358 FANCIQ9NVI1 1328 aa23.67■■□□□ 1.38
COPS6-210ENST00000496358 HSP90AB3PQ58FF7 597 aa23.67■■□□□ 1.38
COPS6-210ENST00000496358 ZNF622Q969S3 477 aaKnown RBP eCLIP23.67■■□□□ 1.387e-12■□□□□ 9.4
COPS6-210ENST00000496358 UBN2Q6ZU65 1347 aa23.66■■□□□ 1.38
COPS6-210ENST00000496358 TWISTNBQ3B726 338 aaPredicted RBP23.66■■□□□ 1.38
COPS6-210ENST00000496358 PARP10Q53GL7 1025 aa23.66■■□□□ 1.38
COPS6-210ENST00000496358 ANKRD13DQ6ZTN6 518 aa23.66■■□□□ 1.38
COPS6-210ENST00000496358 ARHGAP27Q6ZUM4 889 aa23.66■■□□□ 1.38
COPS6-210ENST00000496358 TTLL6Q8N841 843 aa23.66■■□□□ 1.38
COPS6-210ENST00000496358 COL11A2P13942 1736 aaPredicted RBP23.66■■□□□ 1.38
COPS6-210ENST00000496358 GOLGA2Q08379 1002 aa23.65■■□□□ 1.38
COPS6-210ENST00000496358 SUSD4Q5VX71 490 aa23.65■■□□□ 1.38
COPS6-210ENST00000496358 PPP1R42Q7Z4L9 355 aa23.65■■□□□ 1.38
COPS6-210ENST00000496358 PLBD2Q8NHP8 589 aa23.65■■□□□ 1.38
COPS6-210ENST00000496358 MYH16Q9H6N6 1097 aa23.65■■□□□ 1.38
COPS6-210ENST00000496358 TCIRG1Q13488 830 aa23.64■■□□□ 1.37
COPS6-210ENST00000496358 NUTM1Q86Y26 1132 aa23.64■■□□□ 1.37
COPS6-210ENST00000496358 PHAXQ9H814 394 aaKnown RBP23.64■■□□□ 1.37
COPS6-210ENST00000496358 CACNA1SQ13698 1873 aa23.64■■□□□ 1.37
COPS6-210ENST00000496358 CEP350Q5VT06 3117 aa23.64■■□□□ 1.37
COPS6-210ENST00000496358 ERFEQ4G0M1 354 aa23.63■■□□□ 1.37
COPS6-210ENST00000496358 MIER1Q8N108 512 aa23.63■■□□□ 1.37
COPS6-210ENST00000496358 STK31Q9BXU1 1019 aa23.63■■□□□ 1.37
COPS6-210ENST00000496358 SPINK5Q9NQ38 1064 aaPredicted RBP23.63■■□□□ 1.37
COPS6-210ENST00000496358 IBTKQ9P2D0 1353 aaPredicted RBP23.63■■□□□ 1.37
COPS6-210ENST00000496358 SRGNP10124 158 aa23.62■■□□□ 1.37
COPS6-210ENST00000496358 MASTLQ96GX5 879 aa23.62■■□□□ 1.37
COPS6-210ENST00000496358 ARFGEF2Q9Y6D5 1785 aa23.61■■□□□ 1.37
COPS6-210ENST00000496358 TCERG1O14776 1098 aaKnown RBP23.61■■□□□ 1.37
COPS6-210ENST00000496358 NTSR2O95665 410 aa23.61■■□□□ 1.37
COPS6-210ENST00000496358 EXOSC9Q06265 439 aaKnown RBP23.61■■□□□ 1.37
COPS6-210ENST00000496358 STYK1Q6J9G0 422 aa23.61■■□□□ 1.37
COPS6-210ENST00000496358 RIC3Q7Z5B4 369 aa23.61■■□□□ 1.37
COPS6-210ENST00000496358 UTP14AQ9BVJ6 771 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms